EnhancerDB
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  3. vista161[chr1:6301988-6302384]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista161[chr1:6301988-6302384]
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Tissue distribution of vista161
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Transcription factor that possibly regulate vista161[chr1:6301988-6302384]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 6301988 6301992 YY1 TRANSFAC yes 118220831
chr1 6301990 6302001 RUNX1 JASPAR yes 118220832
chr1 6301991 6302001 RUNX3 JASPAR yes 118220833
chr1 6301992 6302001 RUNX2 JASPAR yes 118220834
chr1 6301996 6302000 ESR1 TRANSFAC yes 118220835
chr1 6302001 6302011 NFATC3 JASPAR yes 118220836
chr1 6302002 6302009 NFATC2 JASPAR yes 118220837
chr1 6302028 6302032 NFE TRANSFAC yes 118220838
chr1 6302029 6302034 GATA2 JASPAR yes 118220839
chr1 6302030 6302036 ZNF354C JASPAR yes 118220840
chr1 6302032 6302039 USF1 JASPAR yes 118220841
chr1 6302033 6302038 MYC TRANSFAC yes 118220842
chr1 6302033 6302038 USF1 TRANSFAC yes 118220843
chr1 6302033 6302038 USF2 TRANSFAC yes 118220844
chr1 6302045 6302054 SP1 TRANSFAC yes 118220845
chr1 6302046 6302052 SP1 TRANSFAC yes 118220846
chr1 6302046 6302056 SP1 JASPAR yes 118220847
chr1 6302047 6302054 SP1 TRANSFAC yes 118220848
chr1 6302048 6302053 SP1 TRANSFAC yes 118220849
chr1 6302048 6302054 SP1 TRANSFAC yes 118220850
chr1 6302048 6302055 SP1 TRANSFAC yes 118220851
chr1 6302049 6302060 TFAP2A JASPAR yes 118220852
chr1 6302049 6302061 TFAP2A JASPAR yes 118220853
chr1 6302050 6302059 TFAP2A JASPAR yes 118220854
chr1 6302072 6302086 EBF1 JASPAR yes 118220855
chr1 6302074 6302085 EBF1 JASPAR yes 118220856
chr1 6302089 6302099 SP1 JASPAR yes 118220857
chr1 6302091 6302097 MAZ TRANSFAC yes 118220858
chr1 6302096 6302115 RFX2 JASPAR yes 118220859
chr1 6302100 6302116 RFX5 JASPAR yes 118220860
chr1 6302115 6302120 SP1 TRANSFAC yes 118220861
chr1 6302132 6302137 SP1 TRANSFAC yes 118220862
chr1 6302133 6302138 SP1 TRANSFAC yes 118220863
chr1 6302133 6302139 SP1 TRANSFAC yes 118220864
chr1 6302138 6302142 LFA1 TRANSFAC yes 118220865
chr1 6302155 6302164 CDX1 JASPAR yes 118220866
chr1 6302157 6302168 YY2 JASPAR yes 118220867
chr1 6302176 6302186 SP1 JASPAR yes 118220868
chr1 6302181 6302188 SP1 TRANSFAC yes 118220869
chr1 6302181 6302191 SP1 JASPAR yes 118220870
chr1 6302182 6302190 SP1 TRANSFAC yes 118220871
chr1 6302183 6302188 SP1 TRANSFAC yes 118220872
chr1 6302184 6302189 SP1 TRANSFAC yes 118220873
chr1 6302197 6302211 ZIC1 JASPAR yes 118220874
chr1 6302203 6302208 SP1 TRANSFAC yes 118220875
chr1 6302251 6302265 TCF7L2 JASPAR yes 118220876
chr1 6302261 6302272 NRF1 JASPAR yes 118220877
chr1 6302262 6302270 SP1 TRANSFAC yes 118220878
chr1 6302266 6302271 SP1 TRANSFAC yes 118220879
chr1 6302273 6302283 HOXB13 JASPAR yes 118220880
chr1 6302281 6302286 ETS2 TRANSFAC yes 118220881
chr1 6302290 6302300 ALX3 JASPAR yes 118220882
chr1 6302290 6302300 GSX1 JASPAR yes 118220883
chr1 6302290 6302300 GSX2 JASPAR yes 118220884
chr1 6302290 6302300 HOXB2 JASPAR yes 118220885
chr1 6302290 6302300 HOXB3 JASPAR yes 118220886
chr1 6302290 6302300 MEOX2 JASPAR yes 118220887
chr1 6302290 6302300 MIXL1 JASPAR yes 118220888
chr1 6302290 6302300 MNX1 JASPAR yes 118220889
chr1 6302291 6302299 DLX6 JASPAR yes 118220890
chr1 6302291 6302299 EN1 JASPAR yes 118220891
chr1 6302291 6302299 LBX1 JASPAR yes 118220892
chr1 6302291 6302299 PAX4 JASPAR yes 118220893
chr1 6302291 6302299 PDX1 JASPAR yes 118220894
chr1 6302291 6302299 VAX1 JASPAR yes 118220895
chr1 6302291 6302299 VAX2 JASPAR yes 118220896
chr1 6302291 6302299 VSX1 JASPAR yes 118220897
chr1 6302291 6302299 VSX2 JASPAR yes 118220898
chr1 6302297 6302315 ESR2 JASPAR yes 118220899
chr1 6302298 6302315 NR3C2 JASPAR yes 118220900
chr1 6302298 6302316 ESR2 JASPAR yes 118220901
chr1 6302299 6302314 ESR2 JASPAR yes 118220902
chr1 6302315 6302321 NFE2 TRANSFAC yes 118220903
chr1 6302336 6302346 SP1 JASPAR yes 118220904
chr1 6302337 6302347 SP1 JASPAR yes 118220905
chr1 6302338 6302344 MAZ TRANSFAC yes 118220906
chr1 6302339 6302349 MZF1 JASPAR yes 118220907
chr1 6302343 6302354 NFKB1 JASPAR yes 118220908
chr1 6302362 6302374 HES5 JASPAR yes 118220909
chr1 6302365 6302376 E2F1 JASPAR yes 118220910
SNP sites on vista161[chr1:6301988-6302384]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 6302064 rs531405397 T A no 37196
chr1 6302266 rs374309890 C T
NRF1 SP1
37197
chr1 6302286 rs555937582 AG A
ETS2
37198
chr1 6302304 rs148206566 C T
ESR2 NR3C2
37199
chr1 6302338 rs565590728 G A
MAZ SP1
37200
chr1 6302357 rs537366493 G C no 37201
Genes possibly regulated by vista161[chr1:6301988-6302384]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 6161853 6240183 - CHD5 ENSG00000116254.13 6240183 0.96 1.0 90 38195
chr1 6241329 6269449 - RPL22 ENSG00000116251.5 6269449 0.66 0.99 91 67461
chr1 6265535 6281359 + RNF207 ENSG00000158286.8 6265535 0.84 1.0 92 63547
chr1 6281253 6296032 - ICMT ENSG00000116237.11 6296032 0.61 1.0 93 94044
chr1 6304252 6305638 + HES3 ENSG00000173673.7 6304252 1.0 0.0 94 98132
chr1 6307406 6321035 - GPR153 ENSG00000158292.6 6321035 0.72 0.99 95 81349
Expression level of Genes
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miRNAs possibly regulated by vista161[chr1:6301988-6302384]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results