EnhancerDB
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  3. vista1623[chr1:54144768-54145090]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1623[chr1:54144768-54145090]
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Tissue distribution of vista1623
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Transcription factor that possibly regulate vista1623[chr1:54144768-54145090]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 54144765 54144779 PAX6 JASPAR yes 28945949
chr1 54144765 54144779 PAX6 JASPAR yes 118291343
chr1 54144767 54144781 E2F7 JASPAR yes 28945950
chr1 54144767 54144781 E2F7 JASPAR yes 118291344
chr1 54144770 54144781 E2F4 JASPAR yes 28945951
chr1 54144770 54144781 E2F6 JASPAR yes 28945952
chr1 54144770 54144781 E2F4 JASPAR yes 118291345
chr1 54144770 54144781 E2F6 JASPAR yes 118291346
chr1 54144772 54144780 E2F1 JASPAR yes 28945953
chr1 54144772 54144780 E2F1 JASPAR yes 118291347
chr1 54144801 54144822 ZNF263 JASPAR yes 28945954
chr1 54144801 54144822 ZNF263 JASPAR yes 118291348
chr1 54144807 54144828 ZNF263 JASPAR yes 28945955
chr1 54144807 54144828 ZNF263 JASPAR yes 118291349
chr1 54144809 54144820 E2F6 JASPAR yes 28945956
chr1 54144809 54144820 E2F6 JASPAR yes 118291350
chr1 54144819 54144834 TFAP2A JASPAR yes 28945957
chr1 54144819 54144834 TFAP2C JASPAR yes 28945958
chr1 54144819 54144834 TFAP2A JASPAR yes 118291351
chr1 54144819 54144834 TFAP2C JASPAR yes 118291352
chr1 54144823 54144843 ESR1 JASPAR yes 28945959
chr1 54144823 54144843 ESR1 JASPAR yes 118291353
chr1 54144847 54144857 SP1 JASPAR yes 28945960
chr1 54144847 54144857 SP1 JASPAR yes 118291354
chr1 54144849 54144855 MAZ TRANSFAC yes 28945961
chr1 54144849 54144855 MAZ TRANSFAC yes 118291355
chr1 54144850 54144860 MZF1 JASPAR yes 28945962
chr1 54144850 54144860 MZF1 JASPAR yes 118291356
chr1 54144851 54144871 PPARG JASPAR yes 28945963
chr1 54144851 54144871 PPARG JASPAR yes 118291357
chr1 54144853 54144863 SP1 JASPAR yes 28945964
chr1 54144853 54144863 SP1 JASPAR yes 118291358
chr1 54144854 54144864 SP1 JASPAR yes 28945965
chr1 54144854 54144864 SP1 JASPAR yes 118291359
chr1 54144855 54144860 ETS2 TRANSFAC yes 28945966
chr1 54144855 54144860 ETS2 TRANSFAC yes 118291360
chr1 54144860 54144865 SP1 TRANSFAC yes 28945967
chr1 54144860 54144865 SP1 TRANSFAC yes 118291361
chr1 54144871 54144881 MZF1 JASPAR yes 28945968
chr1 54144871 54144881 MZF1 JASPAR yes 118291362
chr1 54144874 54144895 ZNF263 JASPAR yes 28945969
chr1 54144874 54144895 ZNF263 JASPAR yes 118291363
chr1 54144875 54144896 ZNF263 JASPAR yes 28945970
chr1 54144875 54144896 ZNF263 JASPAR yes 118291364
chr1 54144882 54144886 LFA1 TRANSFAC yes 28945971
chr1 54144882 54144886 LFA1 TRANSFAC yes 118291365
chr1 54144890 54144901 E2F6 JASPAR yes 28945972
chr1 54144890 54144901 E2F6 JASPAR yes 118291366
chr1 54144897 54144910 SMAD2 JASPAR yes 28945973
chr1 54144897 54144910 SMAD2 JASPAR yes 118291367
chr1 54144922 54144934 NHLH1 JASPAR yes 28945974
chr1 54144922 54144934 NHLH1 JASPAR yes 118291368
chr1 54144923 54144933 NHLH1 JASPAR yes 28945975
chr1 54144923 54144933 NHLH1 JASPAR yes 118291369
chr1 54144952 54144962 ALX3 JASPAR yes 28945976
chr1 54144952 54144962 GSX2 JASPAR yes 28945977
chr1 54144952 54144962 MNX1 JASPAR yes 28945978
chr1 54144952 54144962 ALX3 JASPAR yes 118291370
chr1 54144952 54144962 GSX2 JASPAR yes 118291371
chr1 54144952 54144962 MNX1 JASPAR yes 118291372
chr1 54144952 54144963 HOXA10 JASPAR yes 28945979
chr1 54144952 54144963 HOXA10 JASPAR yes 118291373
chr1 54144953 54144961 BARX1 JASPAR yes 28945980
chr1 54144953 54144961 BSX JASPAR yes 28945981
chr1 54144953 54144961 ISL2 JASPAR yes 28945982
chr1 54144953 54144961 LMX1B JASPAR yes 28945983
chr1 54144953 54144961 MSX1 JASPAR yes 28945984
chr1 54144953 54144961 MSX2 JASPAR yes 28945985
chr1 54144953 54144961 BARX1 JASPAR yes 118291374
chr1 54144953 54144961 BSX JASPAR yes 118291375
chr1 54144953 54144961 ISL2 JASPAR yes 118291376
chr1 54144953 54144961 LMX1B JASPAR yes 118291377
chr1 54144953 54144961 MSX1 JASPAR yes 118291378
chr1 54144953 54144961 MSX2 JASPAR yes 118291379
chr1 54144953 54144963 HOXD13 JASPAR yes 28945986
chr1 54144953 54144963 HOXD13 JASPAR yes 118291380
chr1 54144954 54144966 POU3F1 JASPAR yes 28945987
chr1 54144954 54144966 POU3F2 JASPAR yes 28945988
chr1 54144954 54144966 POU3F1 JASPAR yes 118291381
chr1 54144954 54144966 POU3F2 JASPAR yes 118291382
chr1 54144954 54144967 POU3F3 JASPAR yes 28945989
chr1 54144954 54144967 POU3F3 JASPAR yes 118291383
chr1 54144955 54144967 POU2F1 JASPAR yes 28945990
chr1 54144955 54144967 POU2F1 JASPAR yes 118291384
chr1 54144976 54144991 MEF2C JASPAR yes 28945991
chr1 54144976 54144991 MEF2C JASPAR yes 118291385
chr1 54144977 54144992 MEF2A JASPAR yes 28945992
chr1 54144977 54144992 MEF2A JASPAR yes 118291386
chr1 54144979 54144989 MEF2A JASPAR yes 28945993
chr1 54144979 54144989 MEF2A JASPAR yes 118291387
chr1 54144986 54144989 MYB TRANSFAC yes 28945994
chr1 54144986 54144989 MYB TRANSFAC yes 118291388
chr1 54144997 54145001 YY1 TRANSFAC yes 28945995
chr1 54144997 54145001 YY1 TRANSFAC yes 118291389
chr1 54144998 54145009 STAT3 JASPAR yes 28945996
chr1 54144998 54145009 STAT3 JASPAR yes 118291390
chr1 54145025 54145037 FOXI1 JASPAR yes 28945997
chr1 54145025 54145037 FOXI1 JASPAR yes 118291391
chr1 54145028 54145039 FOXA1 JASPAR yes 28945998
chr1 54145028 54145039 FOXA1 JASPAR yes 118291392
chr1 54145028 54145043 FOXA1 JASPAR yes 28945999
chr1 54145028 54145043 FOXA1 JASPAR yes 118291393
chr1 54145029 54145044 FOXP1 JASPAR yes 28946000
chr1 54145029 54145044 FOXP1 JASPAR yes 118291394
chr1 54145030 54145039 SRY JASPAR yes 28946001
chr1 54145030 54145039 SRY JASPAR yes 118291395
chr1 54145030 54145041 FOXP2 JASPAR yes 28946002
chr1 54145030 54145041 FOXP2 JASPAR yes 118291396
chr1 54145030 54145042 FOXC2 JASPAR yes 28946003
chr1 54145030 54145042 FOXC2 JASPAR yes 118291397
chr1 54145030 54145044 FOXF2 JASPAR yes 28946004
chr1 54145030 54145044 FOXF2 JASPAR yes 118291398
chr1 54145031 54145039 FOXD1 JASPAR yes 28946005
chr1 54145031 54145039 FOXG1 JASPAR yes 28946006
chr1 54145031 54145039 FOXO3 JASPAR yes 28946007
chr1 54145031 54145039 FOXD1 JASPAR yes 118291399
chr1 54145031 54145039 FOXG1 JASPAR yes 118291400
chr1 54145031 54145039 FOXO3 JASPAR yes 118291401
chr1 54145031 54145042 FOXC1 JASPAR yes 28946008
chr1 54145031 54145042 FOXC1 JASPAR yes 118291402
chr1 54145032 54145039 FOXD2 JASPAR yes 28946009
chr1 54145032 54145039 FOXI1 JASPAR yes 28946010
chr1 54145032 54145039 FOXL1 JASPAR yes 28946011
chr1 54145032 54145039 FOXO4 JASPAR yes 28946012
chr1 54145032 54145039 FOXO6 JASPAR yes 28946013
chr1 54145032 54145039 FOXP3 JASPAR yes 28946014
chr1 54145032 54145039 FOXD2 JASPAR yes 118291403
chr1 54145032 54145039 FOXI1 JASPAR yes 118291404
chr1 54145032 54145039 FOXL1 JASPAR yes 118291405
chr1 54145032 54145039 FOXO4 JASPAR yes 118291406
chr1 54145032 54145039 FOXO6 JASPAR yes 118291407
chr1 54145032 54145039 FOXP3 JASPAR yes 118291408
chr1 54145032 54145043 FOXA1 JASPAR yes 28946015
chr1 54145032 54145043 FOXA1 JASPAR yes 118291409
chr1 54145060 54145074 TCF7L2 JASPAR yes 28946016
chr1 54145060 54145074 TCF7L2 JASPAR yes 118291410
chr1 54145064 54145070 TCF4 TRANSFAC yes 28946017
chr1 54145064 54145070 TCF4 TRANSFAC yes 118291411
chr1 54145072 54145083 E2F6 JASPAR yes 28946018
chr1 54145072 54145083 E2F6 JASPAR yes 118291412
chr1 54145079 54145091 TAL1 JASPAR yes 28946019
chr1 54145079 54145091 TAL1 JASPAR yes 118291413
chr1 54145079 54145092 ZBTB18 JASPAR yes 28946020
chr1 54145079 54145092 ZBTB18 JASPAR yes 118291414
SNP sites on vista1623[chr1:54144768-54145090]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 54144905 rs113620540 A G
SMAD2
316156
chr1 54145051 rs12025849 G A no 316157
Genes possibly regulated by vista1623[chr1:54144768-54145090]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 53971910 54199877 - GLIS1 ENSG00000174332.3 54199877 0.94 0.98 715 45213
Expression level of Genes
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miRNAs possibly regulated by vista1623[chr1:54144768-54145090]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results