EnhancerDB
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  3. vista1625[chr1:54163740-54163856]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1625[chr1:54163740-54163856]
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Tissue distribution of vista1625
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Transcription factor that possibly regulate vista1625[chr1:54163740-54163856]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 54163740 54163760 RREB1 JASPAR yes 28947780
chr1 54163740 54163760 RREB1 JASPAR yes 118291523
chr1 54163740 54163761 ZNF263 JASPAR yes 28947781
chr1 54163740 54163761 ZNF263 JASPAR yes 118291524
chr1 54163741 54163747 MZF1 JASPAR yes 28947782
chr1 54163741 54163747 MZF1 JASPAR yes 118291525
chr1 54163741 54163761 RREB1 JASPAR yes 28947783
chr1 54163741 54163761 RREB1 JASPAR yes 118291526
chr1 54163742 54163762 RREB1 JASPAR yes 28947784
chr1 54163742 54163762 RREB1 JASPAR yes 118291527
chr1 54163745 54163759 PLAG1 JASPAR yes 28947785
chr1 54163745 54163759 PLAG1 JASPAR yes 118291528
chr1 54163745 54163765 RREB1 JASPAR yes 28947786
chr1 54163745 54163765 RREB1 JASPAR yes 118291529
chr1 54163746 54163756 SP1 JASPAR yes 28947787
chr1 54163746 54163756 SP1 JASPAR yes 118291530
chr1 54163746 54163766 RREB1 JASPAR yes 28947788
chr1 54163746 54163766 RREB1 JASPAR yes 118291531
chr1 54163747 54163757 SP1 JASPAR yes 28947789
chr1 54163747 54163757 SP1 JASPAR yes 118291532
chr1 54163751 54163761 SP1 JASPAR yes 28947790
chr1 54163751 54163761 SP1 JASPAR yes 118291533
chr1 54163751 54163771 RREB1 JASPAR yes 28947791
chr1 54163751 54163771 RREB1 JASPAR yes 118291534
chr1 54163754 54163768 PLAG1 JASPAR yes 28947792
chr1 54163754 54163768 PLAG1 JASPAR yes 118291535
chr1 54163758 54163762 H1TF2 TRANSFAC yes 28947793
chr1 54163758 54163762 NFE TRANSFAC yes 28947794
chr1 54163758 54163762 SRF TRANSFAC yes 28947795
chr1 54163758 54163762 H1TF2 TRANSFAC yes 118291536
chr1 54163758 54163762 NFE TRANSFAC yes 118291537
chr1 54163758 54163762 SRF TRANSFAC yes 118291538
chr1 54163774 54163785 FOXA1 JASPAR yes 28947796
chr1 54163774 54163785 FOXA1 JASPAR yes 118291539
chr1 54163775 54163787 FOXC2 JASPAR yes 28947797
chr1 54163775 54163787 FOXC2 JASPAR yes 118291540
chr1 54163780 54163792 FOXI1 JASPAR yes 28947798
chr1 54163780 54163792 FOXI1 JASPAR yes 118291541
chr1 54163783 54163797 STAT1 JASPAR yes 28947799
chr1 54163783 54163797 STAT1 JASPAR yes 118291542
chr1 54163785 54163796 ETV2 JASPAR yes 28947800
chr1 54163785 54163796 ETV2 JASPAR yes 118291543
chr1 54163786 54163796 ETS1 JASPAR yes 28947801
chr1 54163786 54163796 ETS1 JASPAR yes 118291544
chr1 54163786 54163797 FLI1 JASPAR yes 28947802
chr1 54163786 54163797 FLI1 JASPAR yes 118291545
chr1 54163789 54163798 SRY JASPAR yes 28947803
chr1 54163789 54163798 SRY JASPAR yes 118291546
chr1 54163792 54163801 VENTX JASPAR yes 28947804
chr1 54163792 54163801 VENTX JASPAR yes 118291547
chr1 54163792 54163802 GSX2 JASPAR yes 28947805
chr1 54163792 54163802 MNX1 JASPAR yes 28947806
chr1 54163792 54163802 GSX2 JASPAR yes 118291548
chr1 54163792 54163802 MNX1 JASPAR yes 118291549
chr1 54163793 54163801 BARX1 JASPAR yes 28947807
chr1 54163793 54163801 BARX1 JASPAR yes 118291550
chr1 54163801 54163816 HSF1 JASPAR yes 28947808
chr1 54163801 54163816 HSF1 JASPAR yes 118291551
chr1 54163802 54163815 HSF4 JASPAR yes 28947809
chr1 54163802 54163815 HSF4 JASPAR yes 118291552
chr1 54163803 54163818 IRF9 JASPAR yes 28947810
chr1 54163803 54163818 IRF9 JASPAR yes 118291553
chr1 54163817 54163828 HOXC13 JASPAR yes 28947811
chr1 54163817 54163828 HOXC13 JASPAR yes 118291554
chr1 54163839 54163844 SP1 TRANSFAC yes 28947812
chr1 54163839 54163844 SP1 TRANSFAC yes 118291555
SNP sites on vista1625[chr1:54163740-54163856]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 54163790 rs564096851 G C
ETS1 ETV2 FLI1 FOXI1 SRY STAT1
316364
chr1 54163817 rs533231829 G A
HOXC13 IRF9
316365
chr1 54163836 rs11582634 G C no 316366
chr1 54163854 rs1780394 T C no 316367
Genes possibly regulated by vista1625[chr1:54163740-54163856]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 53971910 54199877 - GLIS1 ENSG00000174332.3 54199877 0.94 0.98 715 63979
Expression level of Genes
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miRNAs possibly regulated by vista1625[chr1:54163740-54163856]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results