EnhancerDB
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  3. vista1627[chr1:54186706-54187027]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1627[chr1:54186706-54187027]
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Tissue distribution of vista1627
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Transcription factor that possibly regulate vista1627[chr1:54186706-54187027]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 54186718 54186729 BATF JASPAR yes 118291586
chr1 54186722 54186743 IRF1 JASPAR yes 118291587
chr1 54186724 54186738 IRF7 JASPAR yes 118291588
chr1 54186727 54186742 FOXP1 JASPAR yes 118291589
chr1 54186729 54186734 ETS2 TRANSFAC yes 118291590
chr1 54186730 54186741 FOXP2 JASPAR yes 118291591
chr1 54186731 54186739 FOXO3 JASPAR yes 118291592
chr1 54186734 54186740 HiNF-A TRANSFAC yes 118291593
chr1 54186754 54186758 TEAD2 TRANSFAC yes 118291594
chr1 54186754 54186759 TBP TRANSFAC yes 118291595
chr1 54186754 54186760 TFIID TRANSFAC yes 118291596
chr1 54186763 54186767 YY1 TRANSFAC yes 118291597
chr1 54186765 54186780 MEF2A JASPAR yes 118291598
chr1 54186766 54186781 MEF2C JASPAR yes 118291599
chr1 54186767 54186779 FOXC2 JASPAR yes 118291600
chr1 54186767 54186779 MEF2A JASPAR yes 118291601
chr1 54186767 54186779 MEF2B JASPAR yes 118291602
chr1 54186767 54186779 MEF2D JASPAR yes 118291603
chr1 54186768 54186778 MEF2A JASPAR yes 118291604
chr1 54186768 54186779 FOXB1 JASPAR yes 118291605
chr1 54186768 54186779 FOXC1 JASPAR yes 118291606
chr1 54186769 54186773 YY1 TRANSFAC yes 118291607
chr1 54186771 54186787 POU4F3 JASPAR yes 118291608
chr1 54186773 54186777 TEAD2 TRANSFAC yes 118291609
chr1 54186773 54186778 TBP TRANSFAC yes 118291610
chr1 54186773 54186779 TMF TRANSFAC yes 118291611
chr1 54186773 54186787 POU4F1 JASPAR yes 118291612
chr1 54186774 54186788 POU4F1 JASPAR yes 118291613
chr1 54186774 54186790 POU4F3 JASPAR yes 118291614
chr1 54186784 54186788 TEAD2 TRANSFAC yes 118291615
chr1 54186784 54186789 TBP TRANSFAC yes 118291616
chr1 54186784 54186790 TFIID TRANSFAC yes 118291617
chr1 54186785 54186799 ONECUT2 JASPAR yes 118291618
chr1 54186785 54186799 ONECUT3 JASPAR yes 118291619
chr1 54186785 54186800 FOXP1 JASPAR yes 118291620
chr1 54186786 54186801 FOXA1 JASPAR yes 118291621
chr1 54186787 54186798 FOXB1 JASPAR yes 118291622
chr1 54186787 54186798 FOXC1 JASPAR yes 118291623
chr1 54186787 54186799 FOXC2 JASPAR yes 118291624
chr1 54186788 54186800 FOXI1 JASPAR yes 118291625
chr1 54186807 54186812 MYB TRANSFAC yes 118291626
chr1 54186809 54186820 BATF JASPAR yes 118291627
chr1 54186813 54186834 IRF1 JASPAR yes 118291628
chr1 54186818 54186833 FOXP1 JASPAR yes 118291629
chr1 54186818 54186839 IRF1 JASPAR yes 118291630
chr1 54186819 54186834 FOXP1 JASPAR yes 118291631
chr1 54186820 54186825 ETS2 TRANSFAC yes 118291632
chr1 54186822 54186837 STAT2 JASPAR yes 118291633
chr1 54186823 54186844 IRF1 JASPAR yes 118291634
chr1 54186827 54186841 SPI1 JASPAR yes 118291635
chr1 54186850 54186854 NFE TRANSFAC yes 118291636
chr1 54186875 54186895 PPARG JASPAR yes 118291637
chr1 54186877 54186884 NKX3-1 JASPAR yes 118291638
chr1 54186913 54186917 YY1 TRANSFAC yes 118291639
chr1 54186925 54186934 PITX3 JASPAR yes 118291640
chr1 54186925 54186935 GSC2 JASPAR yes 118291641
chr1 54186925 54186935 GSC JASPAR yes 118291642
chr1 54186926 54186934 OTX1 JASPAR yes 118291643
chr1 54186938 54186958 RREB1 JASPAR yes 118291644
chr1 54186946 54186958 NHLH1 JASPAR yes 118291645
chr1 54186947 54186957 NHLH1 JASPAR yes 118291646
chr1 54186957 54186960 MYB TRANSFAC yes 118291647
chr1 54186958 54186974 SOX4 JASPAR yes 118291648
chr1 54186971 54186976 ETS2 TRANSFAC yes 118291649
chr1 54186971 54186992 ZNF263 JASPAR yes 118291650
chr1 54186973 54186984 E2F6 JASPAR yes 118291651
chr1 54186987 54186991 YY1 TRANSFAC yes 118291652
chr1 54186991 54186995 YY1 TRANSFAC yes 118291653
chr1 54186991 54187002 CEBPB JASPAR yes 118291654
chr1 54187019 54187022 MYB TRANSFAC yes 118291655
SNP sites on vista1627[chr1:54186706-54187027]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 54186727 rs150210253 TA T
BATF FOXP1 IRF1 IRF7
316518
chr1 54186746 rs182283095 T C no 316519
chr1 54186786 rs9803748 A G
FOXA1 FOXP1 ONECUT2 ONECUT3 POU4F1 POU4F3 TBP TEAD2 TFIID
316520
chr1 54186792 rs184960841 T C
FOXA1 FOXB1 FOXC1 FOXC2 FOXI1 FOXP1 ONECUT2 ONECUT3
316521
chr1 54186810 rs149241119 T C
BATF MYB
316522
chr1 54186905 rs375543300 C T no 316523
Genes possibly regulated by vista1627[chr1:54186706-54187027]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 53971910 54199877 - GLIS1 ENSG00000174332.3 54199877 0.94 0.98 715 87150
Expression level of Genes
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miRNAs possibly regulated by vista1627[chr1:54186706-54187027]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results