Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region



Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 54260169 54260326 GATA3 UCSC Txn Factor no Conserved 107804346
chr1 54260218 54260230 GRHL1 JASPAR yes 118291742
chr1 54260227 54260231 TEAD2 TRANSFAC yes 118291743
chr1 54260244 54260250 TBP TRANSFAC yes 118291744
chr1 54260245 54260260 FOXP1 JASPAR yes 118291745
chr1 54260246 54260258 IRF1 JASPAR yes 118291746
chr1 54260249 54260260 FOXC1 JASPAR yes 118291747
chr1 54260252 54260272 TP53 JASPAR yes 118291748
chr1 54260254 54260274 TP63 JASPAR yes 118291749
chr1 54260255 54260273 TP53 JASPAR yes 118291750
chr1 54260263 54260273 SP1 JASPAR yes 118291751
chr1 54260274 54260285 E2F1 JASPAR yes 118291752
chr1 54260295 54260306 HOXC13 JASPAR yes 118291753
chr1 54260318 54260333 TFAP2A JASPAR yes 118291754
chr1 54260318 54260333 TFAP2C JASPAR yes 118291755
chr1 54260351 54260355 LFA1 TRANSFAC yes 118291756
chr1 54260373 54260394 IRF1 JASPAR yes 118291757
chr1 54260375 54260387 MEF2D JASPAR yes 118291758
chr1 54260376 54260390 IRF7 JASPAR yes 118291759
chr1 54260378 54260390 IRF1 JASPAR yes 118291760
chr1 54260380 54260395 HNF1A JASPAR yes 118291761
chr1 54260390 54260396 TBP TRANSFAC yes 118291762
chr1 54260390 54260401 PROP1 JASPAR yes 118291763
chr1 54260409 54260422 SMAD2 JASPAR yes 118291764
chr1 54260416 54260431 SCRT1 JASPAR yes 118291765
chr1 54260417 54260427 ID4 JASPAR yes 118291766
chr1 54260417 54260427 TCF3 JASPAR yes 118291767
chr1 54260417 54260427 TCF4 JASPAR yes 118291768
chr1 54260418 54260427 SNAI2 JASPAR yes 118291769
chr1 54260419 54260424 USF2 TRANSFAC yes 118291770
chr1 54260448 54260466 RARA JASPAR yes 118291771
chr1 54260449 54260457 TBX15 JASPAR yes 118291772
chr1 54260449 54260460 E2F6 JASPAR yes 118291773
chr1 54260450 54260455 SP1 TRANSFAC yes 118291774

chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 54260434 rs139991340 G A no 316712
chr1 54260466 rs556553002 T C
316713
chr1 54260472 rs113315574 C T no 316714
chr1 54260562 rs541576712 A T no 316715

Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 53971910 54199877 - GLIS1 ENSG00000174332.3 54199877 0.94 0.98 715 39660
chr1 54231133 54304533 - NDC1 ENSG00000058804.10 54304533 0.84 0.99 716 56029
chr1 54317392 54356407 - YIPF1 ENSG00000058799.9 54356407 0.65 1.0 717 4155
chr1 54356912 54376759 + DIO1 ENSG00000211452.6 54356912 0.97 0.94 718 3650


Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More

No results