EnhancerDB
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  3. vista1638[chr1:54695028-54695502]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1638[chr1:54695028-54695502]
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Tissue distribution of vista1638
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Transcription factor that possibly regulate vista1638[chr1:54695028-54695502]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 54695012 54695421 GATA1 UCSC Txn Factor no Conserved 107804392
chr1 54695015 54695032 ESR1 JASPAR yes 28963269
chr1 54695015 54695032 ESR1 JASPAR yes 118291992
chr1 54695020 54695031 GCM1 JASPAR yes 28963271
chr1 54695020 54695031 GCM1 JASPAR yes 118291993
chr1 54695024 54695038 TLX1 JASPAR yes 28963272
chr1 54695024 54695038 TLX1 JASPAR yes 118291994
chr1 54695025 54695039 TLX1 JASPAR yes 28963273
chr1 54695025 54695039 TLX1 JASPAR yes 118291995
chr1 54695039 54695048 SRY JASPAR yes 28963274
chr1 54695039 54695048 SRY JASPAR yes 118291996
chr1 54695041 54695044 MYB TRANSFAC yes 28963275
chr1 54695041 54695044 MYB TRANSFAC yes 118291997
chr1 54695042 54695056 SPIC JASPAR yes 28963276
chr1 54695042 54695056 SPIC JASPAR yes 118291998
chr1 54695047 54695052 ETS2 TRANSFAC yes 28963277
chr1 54695047 54695052 ETS2 TRANSFAC yes 118291999
chr1 54695059 54695065 HiNF-A TRANSFAC yes 28963278
chr1 54695059 54695065 HiNF-A TRANSFAC yes 118292000
chr1 54695072 54695087 TFAP2C JASPAR yes 28963279
chr1 54695072 54695087 TFAP2C JASPAR yes 118292001
chr1 54695073 54695085 INSM1 JASPAR yes 28963280
chr1 54695073 54695085 INSM1 JASPAR yes 118292002
chr1 54695078 54695099 ZNF263 JASPAR yes 28963281
chr1 54695078 54695099 ZNF263 JASPAR yes 118292003
chr1 54695084 54695089 SP1 TRANSFAC yes 28963282
chr1 54695084 54695089 SP1 TRANSFAC yes 118292004
chr1 54695096 54695106 SP1 JASPAR yes 28963283
chr1 54695096 54695106 SP1 JASPAR yes 118292005
chr1 54695097 54695117 RREB1 JASPAR yes 28963284
chr1 54695097 54695117 RREB1 JASPAR yes 118292006
chr1 54695098 54695103 SP1 TRANSFAC yes 28963285
chr1 54695098 54695103 SP1 TRANSFAC yes 118292007
chr1 54695100 54695120 RREB1 JASPAR yes 28963286
chr1 54695100 54695120 RREB1 JASPAR yes 118292008
chr1 54695107 54695128 ZNF263 JASPAR yes 28963287
chr1 54695107 54695128 ZNF263 JASPAR yes 118292009
chr1 54695115 54695120 SP1 TRANSFAC yes 28963288
chr1 54695115 54695120 SP1 TRANSFAC yes 118292010
chr1 54695117 54695122 TFAP2A TRANSFAC yes 28963289
chr1 54695117 54695122 TFAP2A TRANSFAC yes 118292011
chr1 54695117 54695123 MZF1 JASPAR yes 28963290
chr1 54695117 54695123 MZF1 JASPAR yes 118292012
chr1 54695119 54695124 ETS2 TRANSFAC yes 28963291
chr1 54695119 54695124 ETS2 TRANSFAC yes 118292013
chr1 54695119 54695134 PRDM1 JASPAR yes 28963292
chr1 54695119 54695134 PRDM1 JASPAR yes 118292014
chr1 54695134 54695138 LFA1 TRANSFAC yes 28963293
chr1 54695134 54695138 LFA1 TRANSFAC yes 118292015
chr1 54695141 54695154 TFAP2A JASPAR yes 28963294
chr1 54695141 54695154 TFAP2B JASPAR yes 28963295
chr1 54695141 54695154 TFAP2C JASPAR yes 28963296
chr1 54695141 54695154 TFAP2A JASPAR yes 118292016
chr1 54695141 54695154 TFAP2B JASPAR yes 118292017
chr1 54695141 54695154 TFAP2C JASPAR yes 118292018
chr1 54695141 54695156 TFAP2C JASPAR yes 28963297
chr1 54695141 54695156 TFAP2C JASPAR yes 118292019
chr1 54695142 54695153 EBF1 JASPAR yes 28963298
chr1 54695142 54695153 EBF1 JASPAR yes 118292020
chr1 54695157 54695173 ZNF143 JASPAR yes 28963299
chr1 54695157 54695173 ZNF143 JASPAR yes 118292021
chr1 54695167 54695182 RUNX2 JASPAR yes 28963300
chr1 54695167 54695182 RUNX2 JASPAR yes 118292022
chr1 54695175 54695187 ZBTB7C JASPAR yes 28963301
chr1 54695175 54695187 ZBTB7C JASPAR yes 118292023
chr1 54695189 54695197 NR4A2 JASPAR yes 28963302
chr1 54695189 54695197 NR4A2 JASPAR yes 118292024
chr1 54695191 54695195 ESR1 TRANSFAC yes 28963303
chr1 54695191 54695195 ESR1 TRANSFAC yes 118292025
chr1 54695243 54695257 GATA2 JASPAR yes 28963304
chr1 54695243 54695257 GATA2 JASPAR yes 118292026
chr1 54695245 54695253 GATA3 JASPAR yes 28963305
chr1 54695245 54695253 GATA5 JASPAR yes 28963306
chr1 54695245 54695253 GATA3 JASPAR yes 118292027
chr1 54695245 54695253 GATA5 JASPAR yes 118292028
chr1 54695264 54695279 RUNX2 JASPAR yes 28963307
chr1 54695264 54695279 RUNX2 JASPAR yes 118292029
chr1 54695276 54695280 NFE TRANSFAC yes 28963308
chr1 54695276 54695280 NFE TRANSFAC yes 118292030
chr1 54695276 54695281 GATA1 TRANSFAC yes 28963309
chr1 54695276 54695281 GATA1 TRANSFAC yes 118292031
chr1 54695276 54695282 GATA3 JASPAR yes 28963310
chr1 54695276 54695282 GATA3 JASPAR yes 118292032
chr1 54695278 54695291 HSF1 JASPAR yes 28963311
chr1 54695278 54695291 HSF2 JASPAR yes 28963312
chr1 54695278 54695291 HSF4 JASPAR yes 28963313
chr1 54695278 54695291 HSF1 JASPAR yes 118292033
chr1 54695278 54695291 HSF2 JASPAR yes 118292034
chr1 54695278 54695291 HSF4 JASPAR yes 118292035
chr1 54695286 54695290 NFE TRANSFAC yes 28963314
chr1 54695286 54695290 NFE TRANSFAC yes 118292036
chr1 54695294 54695309 STAT1 JASPAR yes 28963315
chr1 54695294 54695309 STAT1 JASPAR yes 118292037
chr1 54695296 54695307 STAT1 JASPAR yes 28963316
chr1 54695296 54695307 STAT3 JASPAR yes 28963317
chr1 54695296 54695307 STAT1 JASPAR yes 118292038
chr1 54695296 54695307 STAT3 JASPAR yes 118292039
chr1 54695301 54695307 ETS1 JASPAR yes 28963318
chr1 54695301 54695307 ETS1 JASPAR yes 118292040
chr1 54695304 54695314 GABPA JASPAR yes 28963319
chr1 54695304 54695314 GABPA JASPAR yes 118292041
chr1 54695305 54695310 ETS2 TRANSFAC yes 28963320
chr1 54695305 54695310 ETS2 TRANSFAC yes 118292042
chr1 54695316 54695327 ESRRA JASPAR yes 28963321
chr1 54695316 54695327 ESRRA JASPAR yes 118292043
chr1 54695316 54695329 NR2F1 JASPAR yes 28963322
chr1 54695316 54695329 NR2F1 JASPAR yes 118292044
chr1 54695318 54695326 NR4A2 JASPAR yes 28963323
chr1 54695318 54695326 NR4A2 JASPAR yes 118292045
chr1 54695320 54695324 ESR1 TRANSFAC yes 28963324
chr1 54695320 54695324 ESR1 TRANSFAC yes 118292046
chr1 54695323 54695335 TEAD1 JASPAR yes 28963325
chr1 54695323 54695335 TEAD1 JASPAR yes 118292047
chr1 54695351 54695356 TFAP2A TRANSFAC yes 28963326
chr1 54695351 54695356 TFAP2A TRANSFAC yes 118292048
chr1 54695351 54695357 MZF1 JASPAR yes 28963327
chr1 54695351 54695357 MZF1 JASPAR yes 118292049
chr1 54695351 54695361 SP1 JASPAR yes 28963328
chr1 54695351 54695361 SP1 JASPAR yes 118292050
chr1 54695353 54695359 MAZ TRANSFAC yes 28963329
chr1 54695353 54695359 MAZ TRANSFAC yes 118292051
chr1 54695358 54695363 SP1 TRANSFAC yes 28963330
chr1 54695358 54695363 SP1 TRANSFAC yes 118292052
chr1 54695418 54695428 SP1 JASPAR yes 28963331
chr1 54695418 54695428 SP1 JASPAR yes 118292053
chr1 54695419 54695440 ZNF263 JASPAR yes 28963332
chr1 54695419 54695440 ZNF263 JASPAR yes 118292054
chr1 54695420 54695425 ETS2 TRANSFAC yes 28963333
chr1 54695420 54695425 ETS2 TRANSFAC yes 118292055
chr1 54695428 54695449 ZNF263 JASPAR yes 28963334
chr1 54695428 54695449 ZNF263 JASPAR yes 118292056
chr1 54695453 54695463 NFIA JASPAR yes 28963335
chr1 54695453 54695463 NFIA JASPAR yes 118292057
chr1 54695454 54695463 NFIX JASPAR yes 28963336
chr1 54695454 54695463 NFIX JASPAR yes 118292058
chr1 54695454 54695464 TBR1 JASPAR yes 28963337
chr1 54695454 54695464 TBR1 JASPAR yes 118292059
chr1 54695455 54695461 NFIC JASPAR yes 28963338
chr1 54695455 54695461 NFIC JASPAR yes 118292060
chr1 54695455 54695469 TLX1 JASPAR yes 28963339
chr1 54695455 54695469 TLX1 JASPAR yes 118292061
chr1 54695456 54695468 PKNOX2 JASPAR yes 28963340
chr1 54695456 54695468 PKNOX2 JASPAR yes 118292062
chr1 54695456 54695470 TLX1 JASPAR yes 28963341
chr1 54695456 54695470 TLX1 JASPAR yes 118292063
chr1 54695457 54695467 ID4 JASPAR yes 28963342
chr1 54695457 54695467 TCF4 JASPAR yes 28963343
chr1 54695457 54695467 ID4 JASPAR yes 118292064
chr1 54695457 54695467 TCF4 JASPAR yes 118292065
chr1 54695459 54695464 USF2 TRANSFAC yes 28963344
chr1 54695459 54695464 USF2 TRANSFAC yes 118292066
chr1 54695471 54695491 PPARG JASPAR yes 28963345
chr1 54695471 54695491 PPARG JASPAR yes 118292067
chr1 54695488 54695502 JUN JASPAR yes 28963346
chr1 54695488 54695502 JUN JASPAR yes 118292068
chr1 54695490 54695501 BATF JASPAR yes 28963347
chr1 54695490 54695501 BATF JASPAR yes 118292069
chr1 54695491 54695502 NFE2L2 JASPAR yes 28963348
chr1 54695491 54695502 NFE2L2 JASPAR yes 118292070
chr1 54695492 54695503 FOS JASPAR yes 28963349
chr1 54695492 54695503 FOSL1 JASPAR yes 28963350
chr1 54695492 54695503 JUND JASPAR yes 28963351
chr1 54695492 54695503 FOS JASPAR yes 118292071
chr1 54695492 54695503 FOSL1 JASPAR yes 118292072
chr1 54695492 54695503 JUND JASPAR yes 118292073
chr1 54695493 54695504 FOSL2 JASPAR yes 28963352
chr1 54695493 54695504 JUNB JASPAR yes 28963353
chr1 54695493 54695504 FOSL2 JASPAR yes 118292074
chr1 54695493 54695504 JUNB JASPAR yes 118292075
chr1 54695493 54695507 JUN JASPAR yes 28963354
chr1 54695493 54695507 JUN JASPAR yes 118292076
chr1 54695494 54695507 EOMES JASPAR yes 28963355
chr1 54695494 54695507 EOMES JASPAR yes 118292077
chr1 54695496 54695506 TBR1 JASPAR yes 28963356
chr1 54695496 54695506 TBR1 JASPAR yes 118292078
chr1 54695496 54695507 TBX2 JASPAR yes 28963357
chr1 54695496 54695507 TBX2 JASPAR yes 118292079
chr1 54695497 54695507 TBX21 JASPAR yes 28963358
chr1 54695497 54695507 TBX21 JASPAR yes 118292080
chr1 54695498 54695506 MGA JASPAR yes 28963359
chr1 54695498 54695506 TBX15 JASPAR yes 28963360
chr1 54695498 54695506 TBX1 JASPAR yes 28963361
chr1 54695498 54695506 TBX4 JASPAR yes 28963362
chr1 54695498 54695506 TBX5 JASPAR yes 28963363
chr1 54695498 54695506 MGA JASPAR yes 118292081
chr1 54695498 54695506 TBX15 JASPAR yes 118292082
chr1 54695498 54695506 TBX1 JASPAR yes 118292083
chr1 54695498 54695506 TBX4 JASPAR yes 118292084
chr1 54695498 54695506 TBX5 JASPAR yes 118292085
chr1 54695498 54695507 ZEB1 JASPAR yes 28963364
chr1 54695498 54695507 ZEB1 JASPAR yes 118292086
chr1 54695499 54695513 PLAG1 JASPAR yes 28963365
chr1 54695499 54695513 PLAG1 JASPAR yes 118292087
chr1 54695501 54695506 USF2 TRANSFAC yes 28963366
chr1 54695501 54695506 USF2 TRANSFAC yes 118292088
SNP sites on vista1638[chr1:54695028-54695502]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 54695114 rs9436482 G A
GATA1 RREB1 ZNF263
318348
chr1 54695241 rs116281347 C T
GATA1
318349
chr1 54695303 rs569888100 G A
ETS1 GATA1 STAT1 STAT3
318350
chr1 54695347 rs183733826 G A
GATA1
318351
chr1 54695383 rs145350617 G T
GATA1
318352
chr1 54695447 rs558278821 G C
ZNF263
318353
chr1 54695488 rs557372796 G A
JUN PPARG
318354
Genes possibly regulated by vista1638[chr1:54695028-54695502]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 54598747 54619443 - CDCP2 ENSG00000157211.10 54619443 0.91 0.98 725 24415
chr1 54606897 54665746 - RP11-446E24.4 ENSG00000256407.1 54665746 0.93 1.0 726 70718
chr1 54635333 54637997 - AL357673.1 ENSG00000248835.2 54637997 0.62 1.0 727 42969
chr1 54638009 54665709 - CYB5RL ENSG00000215883.5 54665709 0.71 0.99 728 70681
chr1 54649714 54691137 + MRPL37 ENSG00000116221.11 54649714 0.77 1.0 729 54686
chr1 54703710 54704736 + SSBP3-AS1 ENSG00000198711.4 54703710 0.82 0.95 731 91792
Expression level of Genes
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miRNAs possibly regulated by vista1638[chr1:54695028-54695502]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results