EnhancerDB
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  3. vista1639[chr1:54696817-54697014]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1639[chr1:54696817-54697014]
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Tissue distribution of vista1639
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Transcription factor that possibly regulate vista1639[chr1:54696817-54697014]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 54696487 54696971 GATA3 UCSC Txn Factor no Conserved 107804405
chr1 54696539 54697089 GATA2 UCSC Txn Factor no Conserved 107804407
chr1 54696810 54696822 YY1 JASPAR yes 28963571
chr1 54696810 54696822 YY1 JASPAR yes 118292089
chr1 54696815 54696819 YY1 TRANSFAC yes 28963572
chr1 54696815 54696819 YY1 TRANSFAC yes 118292090
chr1 54696849 54696853 H1TF2 TRANSFAC yes 28963573
chr1 54696849 54696853 NFE TRANSFAC yes 28963574
chr1 54696849 54696853 SRF TRANSFAC yes 28963575
chr1 54696849 54696853 H1TF2 TRANSFAC yes 118292091
chr1 54696849 54696853 NFE TRANSFAC yes 118292092
chr1 54696849 54696853 SRF TRANSFAC yes 118292093
chr1 54696877 54696887 MEOX2 JASPAR yes 28963576
chr1 54696877 54696887 MEOX2 JASPAR yes 118292094
chr1 54696880 54696884 YY1 TRANSFAC yes 28963577
chr1 54696880 54696884 YY1 TRANSFAC yes 118292095
chr1 54696888 54696898 HOXC10 JASPAR yes 28963578
chr1 54696888 54696898 HOXD11 JASPAR yes 28963579
chr1 54696888 54696898 HOXC10 JASPAR yes 118292096
chr1 54696888 54696898 HOXD11 JASPAR yes 118292097
chr1 54696888 54696899 HOXC12 JASPAR yes 28963580
chr1 54696888 54696899 HOXC12 JASPAR yes 118292098
chr1 54696909 54696919 TBX21 JASPAR yes 28963581
chr1 54696909 54696919 TBX21 JASPAR yes 118292099
chr1 54696909 54696920 TBX20 JASPAR yes 28963582
chr1 54696909 54696920 TBX2 JASPAR yes 28963583
chr1 54696909 54696920 TBX20 JASPAR yes 118292100
chr1 54696909 54696920 TBX2 JASPAR yes 118292101
chr1 54696909 54696922 EOMES JASPAR yes 28963584
chr1 54696909 54696922 EOMES JASPAR yes 118292102
chr1 54696910 54696918 MGA JASPAR yes 28963585
chr1 54696910 54696918 TBX15 JASPAR yes 28963586
chr1 54696910 54696918 TBX1 JASPAR yes 28963587
chr1 54696910 54696918 TBX4 JASPAR yes 28963588
chr1 54696910 54696918 TBX5 JASPAR yes 28963589
chr1 54696910 54696918 MGA JASPAR yes 118292103
chr1 54696910 54696918 TBX15 JASPAR yes 118292104
chr1 54696910 54696918 TBX1 JASPAR yes 118292105
chr1 54696910 54696918 TBX4 JASPAR yes 118292106
chr1 54696910 54696918 TBX5 JASPAR yes 118292107
chr1 54696910 54696920 TBR1 JASPAR yes 28963590
chr1 54696910 54696920 TBR1 JASPAR yes 118292108
chr1 54696914 54696923 NKX2-8 JASPAR yes 28963591
chr1 54696914 54696923 NKX2-8 JASPAR yes 118292109
chr1 54696921 54696927 YY1 JASPAR yes 28963592
chr1 54696921 54696927 YY1 JASPAR yes 118292110
chr1 54696925 54696940 RUNX2 JASPAR yes 28963593
chr1 54696925 54696940 RUNX2 JASPAR yes 118292111
chr1 54696928 54696939 RUNX1 JASPAR yes 28963594
chr1 54696928 54696939 RUNX1 JASPAR yes 118292112
chr1 54696929 54696939 RUNX3 JASPAR yes 28963595
chr1 54696929 54696939 RUNX3 JASPAR yes 118292113
chr1 54696930 54696939 RUNX2 JASPAR yes 28963596
chr1 54696930 54696939 RUNX2 JASPAR yes 118292114
chr1 54696934 54696946 IRF1 JASPAR yes 28963597
chr1 54696934 54696946 IRF1 JASPAR yes 118292115
chr1 54696938 54696951 POU2F2 JASPAR yes 28963598
chr1 54696938 54696951 POU2F2 JASPAR yes 118292116
chr1 54696938 54696952 POU1F1 JASPAR yes 28963599
chr1 54696938 54696952 POU1F1 JASPAR yes 118292117
chr1 54696939 54696948 POU2F1 TRANSFAC yes 28963600
chr1 54696939 54696948 POU2F1 TRANSFAC yes 118292118
chr1 54696939 54696951 POU3F1 JASPAR yes 28963601
chr1 54696939 54696951 POU3F2 JASPAR yes 28963602
chr1 54696939 54696951 POU3F1 JASPAR yes 118292119
chr1 54696939 54696951 POU3F2 JASPAR yes 118292120
chr1 54696939 54696952 POU3F3 JASPAR yes 28963603
chr1 54696939 54696952 POU3F3 JASPAR yes 118292121
chr1 54696940 54696952 POU2F1 JASPAR yes 28963604
chr1 54696940 54696952 POU2F1 JASPAR yes 118292122
chr1 54696941 54696948 POU2F1 TRANSFAC yes 28963605
chr1 54696941 54696948 POU2F2C TRANSFAC yes 28963606
chr1 54696941 54696948 POU2F2 TRANSFAC yes 28963607
chr1 54696941 54696948 POU2F1 TRANSFAC yes 118292123
chr1 54696941 54696948 POU2F2C TRANSFAC yes 118292124
chr1 54696941 54696948 POU2F2 TRANSFAC yes 118292125
chr1 54696941 54696949 POU2F1 TRANSFAC yes 28963608
chr1 54696941 54696949 POU2F1 TRANSFAC yes 118292126
chr1 54696941 54696950 POU3F4 JASPAR yes 28963609
chr1 54696941 54696950 POU5F1B JASPAR yes 28963610
chr1 54696941 54696950 POU3F4 JASPAR yes 118292127
chr1 54696941 54696950 POU5F1B JASPAR yes 118292128
chr1 54696946 54696950 YY1 TRANSFAC yes 28963611
chr1 54696946 54696950 YY1 TRANSFAC yes 118292129
chr1 54696947 54696955 FEV JASPAR yes 28963612
chr1 54696947 54696955 FEV JASPAR yes 118292130
chr1 54696951 54696961 EMX1 JASPAR yes 28963613
chr1 54696951 54696961 HOXB3 JASPAR yes 28963614
chr1 54696951 54696961 EMX1 JASPAR yes 118292131
chr1 54696951 54696961 HOXB3 JASPAR yes 118292132
chr1 54696952 54696964 HNF1B JASPAR yes 28963615
chr1 54696952 54696964 HNF1B JASPAR yes 118292133
chr1 54696953 54696964 FOSL2 JASPAR yes 28963616
chr1 54696953 54696964 FOSL2 JASPAR yes 118292134
chr1 54696954 54696965 JUND JASPAR yes 28963617
chr1 54696954 54696965 JUND JASPAR yes 118292135
chr1 54696960 54696963 MYB TRANSFAC yes 28963618
chr1 54696960 54696963 MYB TRANSFAC yes 118292136
chr1 54696979 54696989 TFEC JASPAR yes 28963619
chr1 54696979 54696989 TFEC JASPAR yes 118292137
chr1 54696993 54697008 MEF2C JASPAR yes 28963620
chr1 54696993 54697008 MEF2C JASPAR yes 118292138
chr1 54696996 54697000 YY1 TRANSFAC yes 28963621
chr1 54696996 54697000 YY1 TRANSFAC yes 118292139
chr1 54697012 54697018 HiNF-A TRANSFAC yes 28963622
chr1 54697012 54697018 HiNF-A TRANSFAC yes 118292140
SNP sites on vista1639[chr1:54696817-54697014]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista1639[chr1:54696817-54697014]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 54598747 54619443 - CDCP2 ENSG00000157211.10 54619443 0.91 0.98 725 22626
chr1 54606897 54665746 - RP11-446E24.4 ENSG00000256407.1 54665746 0.93 1.0 726 68929
chr1 54635333 54637997 - AL357673.1 ENSG00000248835.2 54637997 0.62 1.0 727 41180
chr1 54638009 54665709 - CYB5RL ENSG00000215883.5 54665709 0.71 0.99 728 68892
chr1 54649714 54691137 + MRPL37 ENSG00000116221.11 54649714 0.77 1.0 729 52897
chr1 54703710 54704736 + SSBP3-AS1 ENSG00000198711.4 54703710 0.82 0.95 731 93304
Expression level of Genes
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miRNAs possibly regulated by vista1639[chr1:54696817-54697014]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results