EnhancerDB
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  3. vista1641[chr1:54713635-54713793]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1641[chr1:54713635-54713793]
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Tissue distribution of vista1641
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Transcription factor that possibly regulate vista1641[chr1:54713635-54713793]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 54713648 54713654 SOX10 JASPAR yes 28964151
chr1 54713648 54713654 SOX10 JASPAR yes 118292230
chr1 54713650 54713668 ESR2 JASPAR yes 28964152
chr1 54713650 54713668 ESR2 JASPAR yes 118292231
chr1 54713651 54713666 AR JASPAR yes 28964153
chr1 54713651 54713666 AR JASPAR yes 118292232
chr1 54713684 54713693 JDP2 JASPAR yes 28964154
chr1 54713684 54713693 JDP2 JASPAR yes 118292233
chr1 54713690 54713694 YY1 TRANSFAC yes 28964155
chr1 54713690 54713694 YY1 TRANSFAC yes 118292234
chr1 54713699 54713711 PKNOX1 JASPAR yes 28964156
chr1 54713699 54713711 PKNOX2 JASPAR yes 28964157
chr1 54713699 54713711 TGIF1 JASPAR yes 28964158
chr1 54713699 54713711 TGIF2 JASPAR yes 28964159
chr1 54713699 54713711 PKNOX1 JASPAR yes 118292235
chr1 54713699 54713711 PKNOX2 JASPAR yes 118292236
chr1 54713699 54713711 TGIF1 JASPAR yes 118292237
chr1 54713699 54713711 TGIF2 JASPAR yes 118292238
chr1 54713700 54713711 USF1 JASPAR yes 28964160
chr1 54713700 54713711 USF2 JASPAR yes 28964161
chr1 54713700 54713711 USF1 JASPAR yes 118292239
chr1 54713700 54713711 USF2 JASPAR yes 118292240
chr1 54713717 54713733 SOX8 JASPAR yes 28964162
chr1 54713717 54713733 SOX8 JASPAR yes 118292241
chr1 54713724 54713735 NFE2L2 JASPAR yes 28964163
chr1 54713724 54713735 NFE2L2 JASPAR yes 118292242
chr1 54713742 54713753 CEBPA JASPAR yes 28964164
chr1 54713742 54713753 CEBPA JASPAR yes 118292243
chr1 54713743 54713754 CEBPB JASPAR yes 28964165
chr1 54713743 54713754 CEBPB JASPAR yes 118292244
chr1 54713765 54713781 GLIS1 JASPAR yes 28964166
chr1 54713765 54713781 GLIS1 JASPAR yes 118292245
chr1 54713768 54713780 GLI2 JASPAR yes 28964167
chr1 54713768 54713780 GLI2 JASPAR yes 118292246
chr1 54713770 54713785 AR JASPAR yes 28964168
chr1 54713770 54713785 AR JASPAR yes 118292247
chr1 54713788 54713794 LEF1 TRANSFAC yes 28964169
chr1 54713788 54713794 SOX10 JASPAR yes 28964170
chr1 54713788 54713794 LEF1 TRANSFAC yes 118292248
chr1 54713788 54713794 SOX10 JASPAR yes 118292249
SNP sites on vista1641[chr1:54713635-54713793]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 54713705 rs751360 T C
PKNOX1 PKNOX2 TGIF1 TGIF2 USF1 USF2
318442
chr1 54713771 rs138274917 G A
AR GLI2 GLIS1
318443
Genes possibly regulated by vista1641[chr1:54713635-54713793]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 54598747 54619443 - CDCP2 ENSG00000157211.10 54619443 0.91 0.98 725 5808
chr1 54606897 54665746 - RP11-446E24.4 ENSG00000256407.1 54665746 0.93 1.0 726 52111
chr1 54635333 54637997 - AL357673.1 ENSG00000248835.2 54637997 0.62 1.0 727 24362
chr1 54638009 54665709 - CYB5RL ENSG00000215883.5 54665709 0.71 0.99 728 52074
chr1 54649714 54691137 + MRPL37 ENSG00000116221.11 54649714 0.77 1.0 729 36079
chr1 54703710 54704736 + SSBP3-AS1 ENSG00000198711.4 54703710 0.82 0.95 731 90075
Expression level of Genes
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miRNAs possibly regulated by vista1641[chr1:54713635-54713793]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results