EnhancerDB
  1. Home
  2. Enhancers
  3. vista1642[chr1:54715450-54715803]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1642[chr1:54715450-54715803]
Back to top
Tissue distribution of vista1642
Back to top
Transcription factor that possibly regulate vista1642[chr1:54715450-54715803]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 54715451 54715466 FOXP1 JASPAR yes 28964356
chr1 54715451 54715466 FOXP1 JASPAR yes 118292250
chr1 54715451 54715472 IRF1 JASPAR yes 28964357
chr1 54715451 54715472 IRF1 JASPAR yes 118292251
chr1 54715452 54715467 FOXP1 JASPAR yes 28964358
chr1 54715452 54715467 FOXP1 JASPAR yes 118292252
chr1 54715452 54715473 IRF1 JASPAR yes 28964359
chr1 54715452 54715473 IRF1 JASPAR yes 118292253
chr1 54715453 54715468 FOXP1 JASPAR yes 28964360
chr1 54715453 54715468 FOXP1 JASPAR yes 118292254
chr1 54715453 54715474 IRF1 JASPAR yes 28964361
chr1 54715453 54715474 IRF1 JASPAR yes 118292255
chr1 54715454 54715469 FOXP1 JASPAR yes 28964362
chr1 54715454 54715469 FOXP1 JASPAR yes 118292256
chr1 54715457 54715472 PRDM1 JASPAR yes 28964363
chr1 54715457 54715472 PRDM1 JASPAR yes 118292257
chr1 54715458 54715479 IRF1 JASPAR yes 28964364
chr1 54715458 54715479 IRF1 JASPAR yes 118292258
chr1 54715462 54715476 SPI1 JASPAR yes 28964365
chr1 54715462 54715476 STAT1 JASPAR yes 28964366
chr1 54715462 54715476 SPI1 JASPAR yes 118292259
chr1 54715462 54715476 STAT1 JASPAR yes 118292260
chr1 54715462 54715477 STAT2 JASPAR yes 28964367
chr1 54715462 54715477 STAT2 JASPAR yes 118292261
chr1 54715480 54715495 HNF4A JASPAR yes 28964368
chr1 54715480 54715495 HNF4A JASPAR yes 118292262
chr1 54715481 54715495 NR2F1 JASPAR yes 28964369
chr1 54715481 54715495 NR2F1 JASPAR yes 118292263
chr1 54715481 54715496 HNF4G JASPAR yes 28964370
chr1 54715481 54715496 NR2C2 JASPAR yes 28964371
chr1 54715481 54715496 HNF4G JASPAR yes 118292264
chr1 54715481 54715496 NR2C2 JASPAR yes 118292265
chr1 54715484 54715494 SP1 JASPAR yes 28964372
chr1 54715484 54715494 SP1 JASPAR yes 118292266
chr1 54715487 54715493 NFE2 TRANSFAC yes 28964373
chr1 54715487 54715493 NFE2 TRANSFAC yes 118292267
chr1 54715487 54715499 INSM1 JASPAR yes 28964374
chr1 54715487 54715499 INSM1 JASPAR yes 118292268
chr1 54715509 54715526 RARA JASPAR yes 28964375
chr1 54715509 54715526 RXRA JASPAR yes 28964376
chr1 54715509 54715526 RARA JASPAR yes 118292269
chr1 54715509 54715526 RXRA JASPAR yes 118292270
chr1 54715510 54715514 ESR1 TRANSFAC yes 28964377
chr1 54715510 54715514 ESR1 TRANSFAC yes 118292271
chr1 54715532 54715536 YY1 TRANSFAC yes 28964378
chr1 54715532 54715536 YY1 TRANSFAC yes 118292272
chr1 54715576 54715581 SP1 TRANSFAC yes 28964379
chr1 54715576 54715581 SP1 TRANSFAC yes 118292273
chr1 54715592 54715603 E2F6 JASPAR yes 28964380
chr1 54715592 54715603 E2F6 JASPAR yes 118292274
chr1 54715593 54715614 ZNF263 JASPAR yes 28964381
chr1 54715593 54715614 ZNF263 JASPAR yes 118292275
chr1 54715616 54715627 FOS JASPAR yes 28964382
chr1 54715616 54715627 FOSL1 JASPAR yes 28964383
chr1 54715616 54715627 JUND JASPAR yes 28964384
chr1 54715616 54715627 FOS JASPAR yes 118292276
chr1 54715616 54715627 FOSL1 JASPAR yes 118292277
chr1 54715616 54715627 JUND JASPAR yes 118292278
chr1 54715617 54715628 FOSL2 JASPAR yes 28964385
chr1 54715617 54715628 JUNB JASPAR yes 28964386
chr1 54715617 54715628 FOSL2 JASPAR yes 118292279
chr1 54715617 54715628 JUNB JASPAR yes 118292280
chr1 54715617 54715631 JUN JASPAR yes 28964387
chr1 54715617 54715631 JUN JASPAR yes 118292281
chr1 54715617 54715635 ESR1 JASPAR yes 28964388
chr1 54715617 54715635 ESR1 JASPAR yes 118292282
chr1 54715636 54715648 PKNOX1 JASPAR yes 28964389
chr1 54715636 54715648 PKNOX2 JASPAR yes 28964390
chr1 54715636 54715648 TGIF1 JASPAR yes 28964391
chr1 54715636 54715648 TGIF2 JASPAR yes 28964392
chr1 54715636 54715648 PKNOX1 JASPAR yes 118292283
chr1 54715636 54715648 PKNOX2 JASPAR yes 118292284
chr1 54715636 54715648 TGIF1 JASPAR yes 118292285
chr1 54715636 54715648 TGIF2 JASPAR yes 118292286
chr1 54715664 54715669 H4TF1 TRANSFAC yes 28964393
chr1 54715664 54715669 H4TF1 TRANSFAC yes 118292287
chr1 54715672 54715683 CDX2 JASPAR yes 28964394
chr1 54715672 54715683 CDX2 JASPAR yes 118292288
chr1 54715673 54715684 HOXA10 JASPAR yes 28964395
chr1 54715673 54715684 HOXA10 JASPAR yes 118292289
chr1 54715674 54715678 H1TF2 TRANSFAC yes 28964396
chr1 54715674 54715678 NFE TRANSFAC yes 28964397
chr1 54715674 54715678 SRF TRANSFAC yes 28964398
chr1 54715674 54715678 H1TF2 TRANSFAC yes 118292290
chr1 54715674 54715678 NFE TRANSFAC yes 118292291
chr1 54715674 54715678 SRF TRANSFAC yes 118292292
chr1 54715674 54715683 CDX1 JASPAR yes 28964399
chr1 54715674 54715683 CDX1 JASPAR yes 118292293
chr1 54715674 54715684 HOXA13 JASPAR yes 28964400
chr1 54715674 54715684 HOXB13 JASPAR yes 28964401
chr1 54715674 54715684 HOXD13 JASPAR yes 28964402
chr1 54715674 54715684 HOXA13 JASPAR yes 118292294
chr1 54715674 54715684 HOXB13 JASPAR yes 118292295
chr1 54715674 54715684 HOXD13 JASPAR yes 118292296
chr1 54715707 54715717 ZNF740 JASPAR yes 28964403
chr1 54715707 54715717 ZNF740 JASPAR yes 118292297
chr1 54715708 54715713 TFAP2A TRANSFAC yes 28964404
chr1 54715708 54715713 TFAP2A TRANSFAC yes 118292298
chr1 54715708 54715714 MZF1 JASPAR yes 28964405
chr1 54715708 54715714 MZF1 JASPAR yes 118292299
chr1 54715710 54715716 MAZ TRANSFAC yes 28964406
chr1 54715710 54715716 MAZ TRANSFAC yes 118292300
chr1 54715710 54715721 E2F6 JASPAR yes 28964407
chr1 54715710 54715721 E2F6 JASPAR yes 118292301
chr1 54715722 54715736 JUN JASPAR yes 28964408
chr1 54715722 54715736 JUN JASPAR yes 118292302
chr1 54715723 54715728 GATA1 TRANSFAC yes 28964409
chr1 54715723 54715728 GATA1 TRANSFAC yes 118292303
chr1 54715724 54715735 BATF JASPAR yes 28964410
chr1 54715724 54715735 BATF JASPAR yes 118292304
chr1 54715726 54715737 FOS JASPAR yes 28964411
chr1 54715726 54715737 FOSL1 JASPAR yes 28964412
chr1 54715726 54715737 JUND JASPAR yes 28964413
chr1 54715726 54715737 FOS JASPAR yes 118292305
chr1 54715726 54715737 FOSL1 JASPAR yes 118292306
chr1 54715726 54715737 JUND JASPAR yes 118292307
chr1 54715739 54715752 NFKB1 JASPAR yes 28964414
chr1 54715739 54715752 NFKB2 JASPAR yes 28964415
chr1 54715739 54715752 NFKB1 JASPAR yes 118292308
chr1 54715739 54715752 NFKB2 JASPAR yes 118292309
chr1 54715740 54715751 NFKB1 JASPAR yes 28964416
chr1 54715740 54715751 NFKB1 JASPAR yes 118292310
chr1 54715741 54715746 ETS2 TRANSFAC yes 28964417
chr1 54715741 54715746 ETS2 TRANSFAC yes 118292311
chr1 54715753 54715774 ZNF263 JASPAR yes 28964418
chr1 54715753 54715774 ZNF263 JASPAR yes 118292312
chr1 54715760 54715766 NFE2 TRANSFAC yes 28964419
chr1 54715760 54715766 NFE2 TRANSFAC yes 118292313
chr1 54715760 54715772 INSM1 JASPAR yes 28964420
chr1 54715760 54715772 INSM1 JASPAR yes 118292314
chr1 54715760 54715775 HNF4A JASPAR yes 28964421
chr1 54715760 54715775 HNF4A JASPAR yes 118292315
chr1 54715761 54715775 PLAG1 JASPAR yes 28964422
chr1 54715761 54715775 RXRB JASPAR yes 28964423
chr1 54715761 54715775 RXRG JASPAR yes 28964424
chr1 54715761 54715775 PLAG1 JASPAR yes 118292316
chr1 54715761 54715775 RXRB JASPAR yes 118292317
chr1 54715761 54715775 RXRG JASPAR yes 118292318
chr1 54715761 54715776 HNF4G JASPAR yes 28964425
chr1 54715761 54715776 NR2C2 JASPAR yes 28964426
chr1 54715761 54715776 HNF4G JASPAR yes 118292319
chr1 54715761 54715776 NR2C2 JASPAR yes 118292320
chr1 54715761 54715782 ZNF263 JASPAR yes 28964427
chr1 54715761 54715782 ZNF263 JASPAR yes 118292321
chr1 54715768 54715780 INSM1 JASPAR yes 28964428
chr1 54715768 54715780 INSM1 JASPAR yes 118292322
chr1 54715789 54715808 CTCF JASPAR yes 28964429
chr1 54715789 54715808 CTCF JASPAR yes 118292323
chr1 54715796 54715809 NR2F1 JASPAR yes 28964430
chr1 54715796 54715809 NR2F1 JASPAR yes 118292324
chr1 54715800 54715804 ESR1 TRANSFAC yes 28964431
chr1 54715800 54715804 ESR1 TRANSFAC yes 118292325
SNP sites on vista1642[chr1:54715450-54715803]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 54715457 rs34204635 G GA
FOXP1 IRF1 PRDM1
318469
chr1 54715735 rs623655 A C,T
BATF FOS FOSL1 JUN JUND
318470
chr1 54715751 rs113111638 C T
NFKB1 NFKB2
318471
Genes possibly regulated by vista1642[chr1:54715450-54715803]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 54598747 54619443 - CDCP2 ENSG00000157211.10 54619443 0.91 0.98 725 3993
chr1 54606897 54665746 - RP11-446E24.4 ENSG00000256407.1 54665746 0.93 1.0 726 50296
chr1 54635333 54637997 - AL357673.1 ENSG00000248835.2 54637997 0.62 1.0 727 22547
chr1 54638009 54665709 - CYB5RL ENSG00000215883.5 54665709 0.71 0.99 728 50259
chr1 54649714 54691137 + MRPL37 ENSG00000116221.11 54649714 0.77 1.0 729 34264
chr1 54703710 54704736 + SSBP3-AS1 ENSG00000198711.4 54703710 0.82 0.95 731 88260
Expression level of Genes
Back to top
miRNAs possibly regulated by vista1642[chr1:54715450-54715803]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results