EnhancerDB
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  3. vista1643[chr1:54739679-54739787]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1643[chr1:54739679-54739787]
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Tissue distribution of vista1643
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Transcription factor that possibly regulate vista1643[chr1:54739679-54739787]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 54739157 54739866 CTCF UCSC Txn Factor no Conserved 107804668
chr1 54739550 54739796 EGR1 UCSC Txn Factor no Conserved 107804690
chr1 54739676 54739697 ZNF263 JASPAR yes 28967362
chr1 54739676 54739697 ZNF263 JASPAR yes 118292326
chr1 54739677 54739683 SP1 TRANSFAC yes 28967363
chr1 54739677 54739683 SP1 TRANSFAC yes 118292327
chr1 54739678 54739683 SP1 TRANSFAC yes 28967364
chr1 54739678 54739683 SP1 TRANSFAC yes 118292328
chr1 54739682 54739703 ZNF263 JASPAR yes 28967365
chr1 54739682 54739703 ZNF263 JASPAR yes 118292329
chr1 54739686 54739701 ZIC3 JASPAR yes 28967366
chr1 54739686 54739701 ZIC3 JASPAR yes 118292330
chr1 54739692 54739702 ZNF740 JASPAR yes 28967367
chr1 54739692 54739702 ZNF740 JASPAR yes 118292331
chr1 54739705 54739724 CTCF JASPAR yes 28967368
chr1 54739705 54739724 CTCF JASPAR yes 118292332
chr1 54739707 54739711 NFE TRANSFAC yes 28967369
chr1 54739707 54739711 NFE TRANSFAC yes 118292333
chr1 54739710 54739725 TFAP2C JASPAR yes 28967370
chr1 54739710 54739725 TFAP2C JASPAR yes 118292334
chr1 54739711 54739722 EBF1 JASPAR yes 28967371
chr1 54739711 54739722 EBF1 JASPAR yes 118292335
chr1 54739730 54739736 ZNF354C JASPAR yes 28967372
chr1 54739730 54739736 ZNF354C JASPAR yes 118292336
chr1 54739738 54739749 NFE2L2 JASPAR yes 28967373
chr1 54739738 54739749 NFE2L2 JASPAR yes 118292337
chr1 54739752 54739756 NFE TRANSFAC yes 28967374
chr1 54739752 54739756 NFE TRANSFAC yes 118292338
chr1 54739761 54739767 MZF1 JASPAR yes 28967375
chr1 54739761 54739767 MZF1 JASPAR yes 118292339
chr1 54739761 54739780 CTCF JASPAR yes 28967376
chr1 54739761 54739780 CTCF JASPAR yes 118292340
chr1 54739781 54739785 NFE TRANSFAC yes 28967377
chr1 54739781 54739785 NFE TRANSFAC yes 118292341
SNP sites on vista1643[chr1:54739679-54739787]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista1643[chr1:54739679-54739787]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 54606897 54665746 - RP11-446E24.4 ENSG00000256407.1 54665746 0.93 1.0 726 26067
chr1 54638009 54665709 - CYB5RL ENSG00000215883.5 54665709 0.71 0.99 728 26030
chr1 54649714 54691137 + MRPL37 ENSG00000116221.11 54649714 0.77 1.0 729 10035
chr1 54703710 54704736 + SSBP3-AS1 ENSG00000198711.4 54703710 0.82 0.95 731 64031
Expression level of Genes
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miRNAs possibly regulated by vista1643[chr1:54739679-54739787]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results