EnhancerDB
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  3. vista1647[chr1:54766230-54766370]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1647[chr1:54766230-54766370]
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Tissue distribution of vista1647
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Transcription factor that possibly regulate vista1647[chr1:54766230-54766370]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 54766250 54766255 ETS2 TRANSFAC yes 28970481
chr1 54766250 54766255 ETS2 TRANSFAC yes 118292387
chr1 54766250 54766258 EHF JASPAR yes 28970482
chr1 54766250 54766258 EHF JASPAR yes 118292388
chr1 54766255 54766263 OTX2 JASPAR yes 28970483
chr1 54766255 54766263 OTX2 JASPAR yes 118292389
chr1 54766260 54766264 YY1 TRANSFAC yes 28970484
chr1 54766260 54766264 YY1 TRANSFAC yes 118292390
chr1 54766266 54766277 TFAP2A JASPAR yes 28970485
chr1 54766266 54766277 TFAP2B JASPAR yes 28970486
chr1 54766266 54766277 TFAP2A JASPAR yes 118292391
chr1 54766266 54766277 TFAP2B JASPAR yes 118292392
chr1 54766274 54766279 SP1 TRANSFAC yes 28970487
chr1 54766274 54766279 SP1 TRANSFAC yes 118292393
chr1 54766277 54766287 NFKB1 JASPAR yes 28970488
chr1 54766277 54766287 NFKB1 JASPAR yes 118292394
chr1 54766308 54766320 TAL1 JASPAR yes 28970489
chr1 54766308 54766320 TAL1 JASPAR yes 118292395
chr1 54766310 54766320 NEUROG2 JASPAR yes 28970490
chr1 54766310 54766320 OLIG1 JASPAR yes 28970491
chr1 54766310 54766320 OLIG3 JASPAR yes 28970492
chr1 54766310 54766320 NEUROG2 JASPAR yes 118292396
chr1 54766310 54766320 OLIG1 JASPAR yes 118292397
chr1 54766310 54766320 OLIG3 JASPAR yes 118292398
chr1 54766310 54766322 TAL1 JASPAR yes 28970493
chr1 54766310 54766322 TAL1 JASPAR yes 118292399
chr1 54766319 54766323 YY1 TRANSFAC yes 28970494
chr1 54766319 54766323 YY1 TRANSFAC yes 118292400
chr1 54766328 54766336 BARX1 JASPAR yes 28970495
chr1 54766328 54766336 BARX1 JASPAR yes 118292401
chr1 54766328 54766337 VENTX JASPAR yes 28970496
chr1 54766328 54766337 VENTX JASPAR yes 118292402
chr1 54766334 54766347 ZBTB18 JASPAR yes 28970497
chr1 54766334 54766347 ZBTB18 JASPAR yes 118292403
chr1 54766340 54766350 TBX21 JASPAR yes 28970498
chr1 54766340 54766350 TBX21 JASPAR yes 118292404
chr1 54766340 54766351 TBX2 JASPAR yes 28970499
chr1 54766340 54766351 TBX2 JASPAR yes 118292405
chr1 54766340 54766353 EOMES JASPAR yes 28970500
chr1 54766340 54766353 EOMES JASPAR yes 118292406
chr1 54766341 54766351 TBR1 JASPAR yes 28970501
chr1 54766341 54766351 TBR1 JASPAR yes 118292407
SNP sites on vista1647[chr1:54766230-54766370]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista1647[chr1:54766230-54766370]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 54703710 54704736 + SSBP3-AS1 ENSG00000198711.4 54703710 0.82 0.95 731 37480
Expression level of Genes
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miRNAs possibly regulated by vista1647[chr1:54766230-54766370]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr8 2024700 2024720 + hsa-miR-7160-3p MIMAT0028231 1993160 0.0001565026866294538 0.0 0.0 1475
Expression level of miRNAs
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