EnhancerDB
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  3. vista1654[chr1:54844378-54844570]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1654[chr1:54844378-54844570]
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Tissue distribution of vista1654
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Transcription factor that possibly regulate vista1654[chr1:54844378-54844570]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 54844383 54844398 TFAP2A JASPAR yes 28980063
chr1 54844383 54844398 TFAP2C JASPAR yes 28980064
chr1 54844383 54844398 TFAP2A JASPAR yes 118292643
chr1 54844383 54844398 TFAP2C JASPAR yes 118292644
chr1 54844384 54844395 TFAP2A JASPAR yes 28980065
chr1 54844384 54844395 TFAP2A JASPAR yes 118292645
chr1 54844385 54844394 TFAP2A JASPAR yes 28980066
chr1 54844385 54844394 TFAP2A JASPAR yes 118292646
chr1 54844421 54844426 SP1 TRANSFAC yes 28980067
chr1 54844421 54844426 SP1 TRANSFAC yes 118292647
chr1 54844421 54844430 HIC2 JASPAR yes 28980068
chr1 54844421 54844430 HIC2 JASPAR yes 118292648
chr1 54844424 54844428 LFA1 TRANSFAC yes 28980069
chr1 54844424 54844428 LFA1 TRANSFAC yes 118292649
chr1 54844428 54844434 SOX10 JASPAR yes 28980070
chr1 54844428 54844434 SOX10 JASPAR yes 118292650
chr1 54844431 54844436 ETS2 TRANSFAC yes 28980071
chr1 54844431 54844436 ETS2 TRANSFAC yes 118292651
chr1 54844431 54844439 EHF JASPAR yes 28980072
chr1 54844431 54844439 EHF JASPAR yes 118292652
chr1 54844434 54844455 ZNF263 JASPAR yes 28980073
chr1 54844434 54844455 ZNF263 JASPAR yes 118292653
chr1 54844435 54844440 ETS2 TRANSFAC yes 28980074
chr1 54844435 54844440 ETS2 TRANSFAC yes 118292654
chr1 54844446 54844455 SP1 TRANSFAC yes 28980075
chr1 54844446 54844455 SP1 TRANSFAC yes 118292655
chr1 54844446 54844456 SP1 JASPAR yes 28980076
chr1 54844446 54844456 SP1 JASPAR yes 118292656
chr1 54844447 54844456 SP1 TRANSFAC yes 28980077
chr1 54844447 54844456 SP1 TRANSFAC yes 118292657
chr1 54844448 54844454 MAZ TRANSFAC yes 28980078
chr1 54844448 54844454 MAZ TRANSFAC yes 118292658
chr1 54844454 54844475 ZNF263 JASPAR yes 28980079
chr1 54844454 54844475 ZNF263 JASPAR yes 118292659
chr1 54844480 54844486 SOX10 JASPAR yes 28980080
chr1 54844480 54844486 SOX10 JASPAR yes 118292660
chr1 54844496 54844502 SOX10 JASPAR yes 28980081
chr1 54844496 54844502 SOX10 JASPAR yes 118292661
chr1 54844525 54844530 GATA2 JASPAR yes 28980082
chr1 54844525 54844530 GATA2 JASPAR yes 118292662
chr1 54844536 54844544 EHF JASPAR yes 28980083
chr1 54844536 54844544 EHF JASPAR yes 118292663
chr1 54844540 54844545 ETS2 TRANSFAC yes 28980084
chr1 54844540 54844545 ETS2 TRANSFAC yes 118292664
chr1 54844541 54844552 NFKB1 JASPAR yes 28980085
chr1 54844541 54844552 NFKB1 JASPAR yes 118292665
chr1 54844542 54844552 NFKB1 JASPAR yes 28980086
chr1 54844542 54844552 REL JASPAR yes 28980087
chr1 54844542 54844552 NFKB1 JASPAR yes 118292666
chr1 54844542 54844552 REL JASPAR yes 118292667
chr1 54844547 54844553 MZF1 JASPAR yes 28980088
chr1 54844547 54844553 MZF1 JASPAR yes 118292668
chr1 54844551 54844555 YY1 TRANSFAC yes 28980089
chr1 54844551 54844555 YY1 TRANSFAC yes 118292669
chr1 54844563 54844567 YY1 TRANSFAC yes 28980090
chr1 54844563 54844567 YY1 TRANSFAC yes 118292670
SNP sites on vista1654[chr1:54844378-54844570]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 54844512 rs74071702 A G no 320120
Genes possibly regulated by vista1654[chr1:54844378-54844570]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 54691105 54879152 - SSBP3 ENSG00000157216.11 54879152 0.79 1.0 730 65418
Expression level of Genes
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miRNAs possibly regulated by vista1654[chr1:54844378-54844570]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results