EnhancerDB
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  3. vista1655[chr1:54868582-54868776]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1655[chr1:54868582-54868776]
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Tissue distribution of vista1655
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Transcription factor that possibly regulate vista1655[chr1:54868582-54868776]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 54868592 54868601 HIC2 JASPAR yes 28982233
chr1 54868592 54868601 HIC2 JASPAR yes 118292671
chr1 54868595 54868599 LFA1 TRANSFAC yes 28982234
chr1 54868595 54868599 LFA1 TRANSFAC yes 118292672
chr1 54868599 54868613 IRF7 JASPAR yes 28982235
chr1 54868599 54868613 IRF7 JASPAR yes 118292673
chr1 54868601 54868613 IRF1 JASPAR yes 28982236
chr1 54868601 54868613 IRF1 JASPAR yes 118292674
chr1 54868601 54868616 HNF4G JASPAR yes 28982237
chr1 54868601 54868616 HNF4G JASPAR yes 118292675
chr1 54868602 54868617 HNF4A JASPAR yes 28982238
chr1 54868602 54868617 RUNX2 JASPAR yes 28982239
chr1 54868602 54868617 HNF4A JASPAR yes 118292676
chr1 54868602 54868617 RUNX2 JASPAR yes 118292677
chr1 54868617 54868636 PAX5 JASPAR yes 28982240
chr1 54868617 54868636 PAX5 JASPAR yes 118292678
chr1 54868622 54868626 H4TF2 TRANSFAC yes 28982241
chr1 54868622 54868626 H4TF2 TRANSFAC yes 118292679
chr1 54868688 54868698 TBX21 JASPAR yes 28982242
chr1 54868688 54868698 TBX21 JASPAR yes 118292680
chr1 54868688 54868699 TBX20 JASPAR yes 28982243
chr1 54868688 54868699 TBX2 JASPAR yes 28982244
chr1 54868688 54868699 TBX20 JASPAR yes 118292681
chr1 54868688 54868699 TBX2 JASPAR yes 118292682
chr1 54868688 54868701 EOMES JASPAR yes 28982245
chr1 54868688 54868701 EOMES JASPAR yes 118292683
chr1 54868689 54868697 MGA JASPAR yes 28982246
chr1 54868689 54868697 TBX15 JASPAR yes 28982247
chr1 54868689 54868697 TBX1 JASPAR yes 28982248
chr1 54868689 54868697 TBX4 JASPAR yes 28982249
chr1 54868689 54868697 TBX5 JASPAR yes 28982250
chr1 54868689 54868697 MGA JASPAR yes 118292684
chr1 54868689 54868697 TBX15 JASPAR yes 118292685
chr1 54868689 54868697 TBX1 JASPAR yes 118292686
chr1 54868689 54868697 TBX4 JASPAR yes 118292687
chr1 54868689 54868697 TBX5 JASPAR yes 118292688
chr1 54868689 54868699 TBR1 JASPAR yes 28982251
chr1 54868689 54868699 TBR1 JASPAR yes 118292689
chr1 54868690 54868706 POU4F3 JASPAR yes 28982252
chr1 54868690 54868706 POU4F3 JASPAR yes 118292690
chr1 54868692 54868706 POU4F1 JASPAR yes 28982253
chr1 54868692 54868706 POU4F1 JASPAR yes 118292691
chr1 54868696 54868716 PPARG JASPAR yes 28982254
chr1 54868696 54868716 PPARG JASPAR yes 118292692
chr1 54868707 54868713 NFE2 TRANSFAC yes 28982255
chr1 54868707 54868713 NFE2 TRANSFAC yes 118292693
chr1 54868720 54868739 PAX5 JASPAR yes 28982256
chr1 54868720 54868739 PAX5 JASPAR yes 118292694
chr1 54868731 54868742 FLI1 JASPAR yes 28982257
chr1 54868731 54868742 FLI1 JASPAR yes 118292695
chr1 54868732 54868751 CTCF JASPAR yes 28982258
chr1 54868732 54868751 CTCF JASPAR yes 118292696
chr1 54868736 54868747 E2F4 JASPAR yes 28982259
chr1 54868736 54868747 E2F4 JASPAR yes 118292697
chr1 54868756 54868762 ESR1 TRANSFAC yes 28982260
chr1 54868756 54868762 ESR1 TRANSFAC yes 118292698
chr1 54868758 54868762 ESR1 TRANSFAC yes 28982261
chr1 54868758 54868762 ESR1 TRANSFAC yes 118292699
chr1 54868761 54868765 YY1 TRANSFAC yes 28982262
chr1 54868761 54868765 YY1 TRANSFAC yes 118292700
SNP sites on vista1655[chr1:54868582-54868776]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 54868744 rs112848129 G A
CTCF E2F4
320347
chr1 54868747 rs114139640 G A
CTCF E2F4
320348
Genes possibly regulated by vista1655[chr1:54868582-54868776]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 54691105 54879152 - SSBP3 ENSG00000157216.11 54879152 0.79 1.0 730 89624
Expression level of Genes
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miRNAs possibly regulated by vista1655[chr1:54868582-54868776]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results