EnhancerDB
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  3. vista1658[chr1:54925355-54925634]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1658[chr1:54925355-54925634]
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Tissue distribution of vista1658
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Transcription factor that possibly regulate vista1658[chr1:54925355-54925634]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 54925377 54925398 ZNF263 JASPAR yes 28986187
chr1 54925377 54925398 ZNF263 JASPAR yes 71131531
chr1 54925377 54925398 ZNF263 JASPAR yes 118292847
chr1 54925388 54925398 SP1 JASPAR yes 28986188
chr1 54925388 54925398 SP1 JASPAR yes 71131532
chr1 54925388 54925398 SP1 JASPAR yes 118292848
chr1 54925391 54925397 NFE2 TRANSFAC yes 28986189
chr1 54925391 54925397 NFE2 TRANSFAC yes 71131533
chr1 54925391 54925397 NFE2 TRANSFAC yes 118292849
chr1 54925393 54925402 SP1 TRANSFAC yes 28986190
chr1 54925393 54925402 SP1 TRANSFAC yes 71131534
chr1 54925393 54925402 SP1 TRANSFAC yes 118292850
chr1 54925394 54925400 SP1 TRANSFAC yes 28986191
chr1 54925394 54925400 SP1 TRANSFAC yes 71131535
chr1 54925394 54925400 SP1 TRANSFAC yes 118292851
chr1 54925394 54925404 SP1 JASPAR yes 28986192
chr1 54925394 54925404 SP1 JASPAR yes 71131536
chr1 54925394 54925404 SP1 JASPAR yes 118292852
chr1 54925395 54925402 SP1 TRANSFAC yes 28986193
chr1 54925395 54925402 SP1 TRANSFAC yes 71131537
chr1 54925395 54925402 SP1 TRANSFAC yes 118292853
chr1 54925396 54925401 SP1 TRANSFAC yes 28986194
chr1 54925396 54925401 SP1 TRANSFAC yes 71131538
chr1 54925396 54925401 SP1 TRANSFAC yes 118292854
chr1 54925396 54925402 SP1 TRANSFAC yes 28986195
chr1 54925396 54925402 SP1 TRANSFAC yes 71131539
chr1 54925396 54925402 SP1 TRANSFAC yes 118292855
chr1 54925398 54925417 PAX5 JASPAR yes 28986196
chr1 54925398 54925417 PAX5 JASPAR yes 71131540
chr1 54925398 54925417 PAX5 JASPAR yes 118292856
chr1 54925400 54925414 ZIC1 JASPAR yes 28986197
chr1 54925400 54925414 ZIC1 JASPAR yes 71131541
chr1 54925400 54925414 ZIC1 JASPAR yes 118292857
chr1 54925400 54925415 ZIC3 JASPAR yes 28986198
chr1 54925400 54925415 ZIC4 JASPAR yes 28986199
chr1 54925400 54925415 ZIC3 JASPAR yes 71131542
chr1 54925400 54925415 ZIC4 JASPAR yes 71131543
chr1 54925400 54925415 ZIC3 JASPAR yes 118292858
chr1 54925400 54925415 ZIC4 JASPAR yes 118292859
chr1 54925410 54925429 REST JASPAR yes 28986200
chr1 54925410 54925429 REST JASPAR yes 71131544
chr1 54925410 54925429 REST JASPAR yes 118292860
chr1 54925432 54925442 SP1 TRANSFAC yes 28986201
chr1 54925432 54925442 SP1 TRANSFAC yes 71131545
chr1 54925432 54925442 SP1 TRANSFAC yes 118292861
chr1 54925433 54925443 SP1 JASPAR yes 28986202
chr1 54925433 54925443 SP1 JASPAR yes 71131546
chr1 54925433 54925443 SP1 JASPAR yes 118292862
chr1 54925434 54925440 SP1 TRANSFAC yes 28986203
chr1 54925434 54925440 SP1 TRANSFAC yes 71131547
chr1 54925434 54925440 SP1 TRANSFAC yes 118292863
chr1 54925434 54925444 SP1 JASPAR yes 28986204
chr1 54925434 54925444 SP1 JASPAR yes 71131548
chr1 54925434 54925444 SP1 JASPAR yes 118292864
chr1 54925441 54925452 USF1 JASPAR yes 28986205
chr1 54925441 54925452 USF2 JASPAR yes 28986206
chr1 54925441 54925452 USF1 JASPAR yes 71131549
chr1 54925441 54925452 USF2 JASPAR yes 71131550
chr1 54925441 54925452 USF1 JASPAR yes 118292865
chr1 54925441 54925452 USF2 JASPAR yes 118292866
chr1 54925442 54925452 MAX JASPAR yes 28986207
chr1 54925442 54925452 MAX JASPAR yes 71131551
chr1 54925442 54925452 MAX JASPAR yes 118292867
chr1 54925443 54925456 NR2F1 JASPAR yes 28986208
chr1 54925443 54925456 NR2F1 JASPAR yes 71131552
chr1 54925443 54925456 NR2F1 JASPAR yes 118292868
chr1 54925462 54925478 ZNF143 JASPAR yes 28986209
chr1 54925462 54925478 ZNF143 JASPAR yes 71131553
chr1 54925462 54925478 ZNF143 JASPAR yes 118292869
chr1 54925463 54925468 SP1 TRANSFAC yes 28986210
chr1 54925463 54925468 SP1 TRANSFAC yes 71131554
chr1 54925463 54925468 SP1 TRANSFAC yes 118292870
chr1 54925463 54925477 PLAG1 JASPAR yes 28986211
chr1 54925463 54925477 PLAG1 JASPAR yes 71131555
chr1 54925463 54925477 PLAG1 JASPAR yes 118292871
chr1 54925466 54925477 EBF1 JASPAR yes 28986212
chr1 54925466 54925477 EBF1 JASPAR yes 71131556
chr1 54925466 54925477 EBF1 JASPAR yes 118292872
chr1 54925497 54925511 TLX1 JASPAR yes 28986213
chr1 54925497 54925511 TLX1 JASPAR yes 71131557
chr1 54925497 54925511 TLX1 JASPAR yes 118292873
chr1 54925511 54925525 ONECUT1 JASPAR yes 28986214
chr1 54925511 54925525 ONECUT1 JASPAR yes 71131558
chr1 54925511 54925525 ONECUT1 JASPAR yes 118292874
chr1 54925512 54925522 CUX1 JASPAR yes 28986215
chr1 54925512 54925522 CUX2 JASPAR yes 28986216
chr1 54925512 54925522 CUX1 JASPAR yes 71131559
chr1 54925512 54925522 CUX2 JASPAR yes 71131560
chr1 54925512 54925522 CUX1 JASPAR yes 118292875
chr1 54925512 54925522 CUX2 JASPAR yes 118292876
chr1 54925547 54925551 NFE TRANSFAC yes 28986217
chr1 54925547 54925551 NFE TRANSFAC yes 71131561
chr1 54925547 54925551 NFE TRANSFAC yes 118292877
chr1 54925550 54925560 SP1 JASPAR yes 28986218
chr1 54925550 54925560 SP1 JASPAR yes 71131562
chr1 54925550 54925560 SP1 JASPAR yes 118292878
chr1 54925551 54925559 SP1 TRANSFAC yes 28986219
chr1 54925551 54925559 SP1 TRANSFAC yes 71131563
chr1 54925551 54925559 SP1 TRANSFAC yes 118292879
chr1 54925554 54925567 TFAP2A JASPAR yes 28986220
chr1 54925554 54925567 TFAP2B JASPAR yes 28986221
chr1 54925554 54925567 TFAP2C JASPAR yes 28986222
chr1 54925554 54925567 TFAP2A JASPAR yes 71131564
chr1 54925554 54925567 TFAP2B JASPAR yes 71131565
chr1 54925554 54925567 TFAP2C JASPAR yes 71131566
chr1 54925554 54925567 TFAP2A JASPAR yes 118292880
chr1 54925554 54925567 TFAP2B JASPAR yes 118292881
chr1 54925554 54925567 TFAP2C JASPAR yes 118292882
chr1 54925554 54925568 EBF1 JASPAR yes 28986223
chr1 54925554 54925568 EBF1 JASPAR yes 71131567
chr1 54925554 54925568 EBF1 JASPAR yes 118292883
chr1 54925555 54925570 TFAP2A JASPAR yes 28986224
chr1 54925555 54925570 TFAP2C JASPAR yes 28986225
chr1 54925555 54925570 TFAP2A JASPAR yes 71131568
chr1 54925555 54925570 TFAP2C JASPAR yes 71131569
chr1 54925555 54925570 TFAP2A JASPAR yes 118292884
chr1 54925555 54925570 TFAP2C JASPAR yes 118292885
chr1 54925556 54925567 EBF1 JASPAR yes 28986226
chr1 54925556 54925567 EBF1 JASPAR yes 71131570
chr1 54925556 54925567 EBF1 JASPAR yes 118292886
chr1 54925561 54925571 SP1 JASPAR yes 28986227
chr1 54925561 54925571 SP1 JASPAR yes 71131571
chr1 54925561 54925571 SP1 JASPAR yes 118292887
chr1 54925561 54925582 ZNF263 JASPAR yes 28986228
chr1 54925561 54925582 ZNF263 JASPAR yes 71131572
chr1 54925561 54925582 ZNF263 JASPAR yes 118292888
chr1 54925564 54925569 SP1 TRANSFAC yes 28986229
chr1 54925564 54925569 SP1 TRANSFAC yes 71131573
chr1 54925564 54925569 SP1 TRANSFAC yes 118292889
chr1 54925565 54925575 ZNF740 JASPAR yes 28986230
chr1 54925565 54925575 ZNF740 JASPAR yes 71131574
chr1 54925565 54925575 ZNF740 JASPAR yes 118292890
chr1 54925608 54925623 TFAP2A JASPAR yes 28986231
chr1 54925608 54925623 TFAP2C JASPAR yes 28986232
chr1 54925608 54925623 TFAP2A JASPAR yes 71131575
chr1 54925608 54925623 TFAP2C JASPAR yes 71131576
chr1 54925608 54925623 TFAP2A JASPAR yes 118292891
chr1 54925608 54925623 TFAP2C JASPAR yes 118292892
chr1 54925609 54925620 TFAP2A JASPAR yes 28986233
chr1 54925609 54925620 TFAP2B JASPAR yes 28986234
chr1 54925609 54925620 TFAP2C JASPAR yes 28986235
chr1 54925609 54925620 TFAP2A JASPAR yes 71131577
chr1 54925609 54925620 TFAP2B JASPAR yes 71131578
chr1 54925609 54925620 TFAP2C JASPAR yes 71131579
chr1 54925609 54925620 TFAP2A JASPAR yes 118292893
chr1 54925609 54925620 TFAP2B JASPAR yes 118292894
chr1 54925609 54925620 TFAP2C JASPAR yes 118292895
chr1 54925609 54925621 INSM1 JASPAR yes 28986236
chr1 54925609 54925621 INSM1 JASPAR yes 71131580
chr1 54925609 54925621 INSM1 JASPAR yes 118292896
chr1 54925610 54925619 TFAP2A JASPAR yes 28986237
chr1 54925610 54925619 TFAP2A JASPAR yes 71131581
chr1 54925610 54925619 TFAP2A JASPAR yes 118292897
chr1 54925615 54925619 LFA1 TRANSFAC yes 28986238
chr1 54925615 54925619 LFA1 TRANSFAC yes 71131582
chr1 54925615 54925619 LFA1 TRANSFAC yes 118292898
SNP sites on vista1658[chr1:54925355-54925634]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 54925455 rs12025740 G A
NR2F1
320799
chr1 54925527 rs370830961 T C no 320800
chr1 54925568 rs74073682 G T
EBF1 SP1 TFAP2A TFAP2C ZNF263 ZNF740
320801
Genes possibly regulated by vista1658[chr1:54925355-54925634]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 54691105 54879152 - SSBP3 ENSG00000157216.11 54879152 0.79 1.0 730 53797
chr1 55007930 55104865 + ACOT11 ENSG00000162390.13 55007930 0.84 1.0 732 17704
Expression level of Genes
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miRNAs possibly regulated by vista1658[chr1:54925355-54925634]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results