EnhancerDB
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  3. vista1659[chr1:54929582-54929903]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1659[chr1:54929582-54929903]
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Tissue distribution of vista1659
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Transcription factor that possibly regulate vista1659[chr1:54929582-54929903]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 54929572 54929592 RREB1 JASPAR yes 28986761
chr1 54929572 54929592 RREB1 JASPAR yes 118292899
chr1 54929578 54929592 PLAG1 JASPAR yes 28986762
chr1 54929578 54929592 PLAG1 JASPAR yes 118292900
chr1 54929580 54929597 RXRA JASPAR yes 28986763
chr1 54929580 54929597 RXRA JASPAR yes 118292901
chr1 54929580 54929601 ZNF263 JASPAR yes 28986764
chr1 54929580 54929601 ZNF263 JASPAR yes 118292902
chr1 54929581 54929596 ZIC3 JASPAR yes 28986765
chr1 54929581 54929596 ZIC4 JASPAR yes 28986766
chr1 54929581 54929596 ZIC3 JASPAR yes 118292903
chr1 54929581 54929596 ZIC4 JASPAR yes 118292904
chr1 54929581 54929597 GLIS1 JASPAR yes 28986767
chr1 54929581 54929597 GLIS1 JASPAR yes 118292905
chr1 54929582 54929596 ZIC1 JASPAR yes 28986768
chr1 54929582 54929596 ZIC1 JASPAR yes 118292906
chr1 54929584 54929604 RREB1 JASPAR yes 28986769
chr1 54929584 54929604 RREB1 JASPAR yes 118292907
chr1 54929586 54929596 ZNF740 JASPAR yes 28986770
chr1 54929586 54929596 ZNF740 JASPAR yes 118292908
chr1 54929591 54929608 RARA JASPAR yes 28986771
chr1 54929591 54929608 RXRA JASPAR yes 28986772
chr1 54929591 54929608 RARA JASPAR yes 118292909
chr1 54929591 54929608 RXRA JASPAR yes 118292910
chr1 54929603 54929607 LFA1 TRANSFAC yes 28986773
chr1 54929603 54929607 LFA1 TRANSFAC yes 118292911
chr1 54929634 54929639 SP1 TRANSFAC yes 28986774
chr1 54929634 54929639 SP1 TRANSFAC yes 118292912
chr1 54929636 54929641 TFAP2A TRANSFAC yes 28986775
chr1 54929636 54929641 TFAP2A TRANSFAC yes 118292913
chr1 54929636 54929642 MZF1 JASPAR yes 28986776
chr1 54929636 54929642 MZF1 JASPAR yes 118292914
chr1 54929638 54929652 NR2F1 JASPAR yes 28986777
chr1 54929638 54929652 NR2F1 JASPAR yes 118292915
chr1 54929638 54929656 ESR1 JASPAR yes 28986778
chr1 54929638 54929656 ESR1 JASPAR yes 118292916
chr1 54929655 54929659 H4TF2 TRANSFAC yes 28986779
chr1 54929655 54929659 H4TF2 TRANSFAC yes 118292917
chr1 54929692 54929713 ZNF263 JASPAR yes 28986780
chr1 54929692 54929713 ZNF263 JASPAR yes 118292918
chr1 54929700 54929715 NR2C2 JASPAR yes 28986781
chr1 54929700 54929715 NR2C2 JASPAR yes 118292919
chr1 54929700 54929720 RREB1 JASPAR yes 28986782
chr1 54929700 54929720 RREB1 JASPAR yes 118292920
chr1 54929701 54929715 PLAG1 JASPAR yes 28986783
chr1 54929701 54929715 PLAG1 JASPAR yes 118292921
chr1 54929703 54929713 SP1 JASPAR yes 28986784
chr1 54929703 54929713 SP1 JASPAR yes 118292922
chr1 54929722 54929727 SP1 TRANSFAC yes 28986785
chr1 54929722 54929727 SP1 TRANSFAC yes 118292923
chr1 54929726 54929747 ZNF263 JASPAR yes 28986786
chr1 54929726 54929747 ZNF263 JASPAR yes 118292924
chr1 54929756 54929766 REL JASPAR yes 28986787
chr1 54929756 54929766 REL JASPAR yes 118292925
chr1 54929762 54929773 EBF1 JASPAR yes 28986788
chr1 54929762 54929773 EBF1 JASPAR yes 118292926
chr1 54929774 54929785 CEBPB JASPAR yes 28986789
chr1 54929774 54929785 CEBPB JASPAR yes 118292927
chr1 54929774 54929787 ATF4 JASPAR yes 28986790
chr1 54929774 54929787 ATF4 JASPAR yes 118292928
chr1 54929775 54929788 JUN JASPAR yes 28986791
chr1 54929775 54929788 JUN JASPAR yes 118292929
chr1 54929782 54929792 GCM2 JASPAR yes 28986792
chr1 54929782 54929792 GCM2 JASPAR yes 118292930
chr1 54929795 54929808 ELF1 JASPAR yes 28986793
chr1 54929795 54929808 ELF1 JASPAR yes 118292931
chr1 54929796 54929808 ELF4 JASPAR yes 28986794
chr1 54929796 54929808 ELF4 JASPAR yes 118292932
chr1 54929797 54929808 ETV2 JASPAR yes 28986795
chr1 54929797 54929808 ETV2 JASPAR yes 118292933
chr1 54929798 54929808 ELK1 JASPAR yes 28986796
chr1 54929798 54929808 ELK3 JASPAR yes 28986797
chr1 54929798 54929808 ERF JASPAR yes 28986798
chr1 54929798 54929808 ERG JASPAR yes 28986799
chr1 54929798 54929808 ETS1 JASPAR yes 28986800
chr1 54929798 54929808 ETV1 JASPAR yes 28986801
chr1 54929798 54929808 ETV3 JASPAR yes 28986802
chr1 54929798 54929808 ETV4 JASPAR yes 28986803
chr1 54929798 54929808 ETV6 JASPAR yes 28986804
chr1 54929798 54929808 FEV JASPAR yes 28986805
chr1 54929798 54929808 FLI1 JASPAR yes 28986806
chr1 54929798 54929808 GABPA JASPAR yes 28986807
chr1 54929798 54929808 ELK1 JASPAR yes 118292934
chr1 54929798 54929808 ELK3 JASPAR yes 118292935
chr1 54929798 54929808 ERF JASPAR yes 118292936
chr1 54929798 54929808 ERG JASPAR yes 118292937
chr1 54929798 54929808 ETS1 JASPAR yes 118292938
chr1 54929798 54929808 ETV1 JASPAR yes 118292939
chr1 54929798 54929808 ETV3 JASPAR yes 118292940
chr1 54929798 54929808 ETV4 JASPAR yes 118292941
chr1 54929798 54929808 ETV6 JASPAR yes 118292942
chr1 54929798 54929808 FEV JASPAR yes 118292943
chr1 54929798 54929808 FLI1 JASPAR yes 118292944
chr1 54929798 54929808 GABPA JASPAR yes 118292945
chr1 54929798 54929809 ELK4 JASPAR yes 28986808
chr1 54929798 54929809 FLI1 JASPAR yes 28986809
chr1 54929798 54929809 ELK4 JASPAR yes 118292946
chr1 54929798 54929809 FLI1 JASPAR yes 118292947
chr1 54929799 54929807 EHF JASPAR yes 28986810
chr1 54929799 54929807 FEV JASPAR yes 28986811
chr1 54929799 54929807 EHF JASPAR yes 118292948
chr1 54929799 54929807 FEV JASPAR yes 118292949
chr1 54929800 54929807 SPI1 JASPAR yes 28986812
chr1 54929800 54929807 SPI1 JASPAR yes 118292950
chr1 54929868 54929878 ERF JASPAR yes 28986813
chr1 54929868 54929878 ERF JASPAR yes 118292951
chr1 54929870 54929876 ETS1 JASPAR yes 28986814
chr1 54929870 54929876 ETS1 JASPAR yes 118292952
chr1 54929880 54929899 PAX5 JASPAR yes 28986815
chr1 54929880 54929899 PAX5 JASPAR yes 118292953
SNP sites on vista1659[chr1:54929582-54929903]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 54929727 rs191566607 C T
SP1 ZNF263
320858
chr1 54929744 rs563628493 C T
ZNF263
320859
chr1 54929784 rs549166964 A G
ATF4 CEBPB GCM2 JUN
320860
chr1 54929871 rs183430405 C G,T
ERF ETS1
320861
Genes possibly regulated by vista1659[chr1:54929582-54929903]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 54691105 54879152 - SSBP3 ENSG00000157216.11 54879152 0.79 1.0 730 49570
chr1 55007930 55104865 + ACOT11 ENSG00000162390.13 55007930 0.84 1.0 732 21973
Expression level of Genes
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miRNAs possibly regulated by vista1659[chr1:54929582-54929903]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results