EnhancerDB
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  3. vista1662[chr1:54941776-54941995]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1662[chr1:54941776-54941995]
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Tissue distribution of vista1662
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Transcription factor that possibly regulate vista1662[chr1:54941776-54941995]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 54941762 54941781 CTCF JASPAR yes 28987802
chr1 54941762 54941781 CTCF JASPAR yes 118293056
chr1 54941775 54941786 E2F1 JASPAR yes 28987805
chr1 54941775 54941786 E2F1 JASPAR yes 118293057
chr1 54941776 54941787 E2F4 JASPAR yes 28987806
chr1 54941776 54941787 E2F6 JASPAR yes 28987807
chr1 54941776 54941787 E2F4 JASPAR yes 118293058
chr1 54941776 54941787 E2F6 JASPAR yes 118293059
chr1 54941777 54941782 SP1 TRANSFAC yes 28987808
chr1 54941777 54941782 SP1 TRANSFAC yes 118293060
chr1 54941779 54941799 RREB1 JASPAR yes 28987809
chr1 54941779 54941799 RREB1 JASPAR yes 118293061
chr1 54941781 54941802 ZNF263 JASPAR yes 28987810
chr1 54941781 54941802 ZNF263 JASPAR yes 118293062
chr1 54941783 54941803 RREB1 JASPAR yes 28987811
chr1 54941783 54941803 RREB1 JASPAR yes 118293063
chr1 54941784 54941805 ZNF263 JASPAR yes 28987812
chr1 54941784 54941805 ZNF263 JASPAR yes 118293064
chr1 54941787 54941808 ZNF263 JASPAR yes 28987813
chr1 54941787 54941808 ZNF263 JASPAR yes 118293065
chr1 54941788 54941800 INSM1 JASPAR yes 28987814
chr1 54941788 54941800 INSM1 JASPAR yes 118293066
chr1 54941788 54941808 RREB1 JASPAR yes 28987815
chr1 54941788 54941808 RREB1 JASPAR yes 118293067
chr1 54941793 54941803 SP1 JASPAR yes 28987816
chr1 54941793 54941803 SP1 JASPAR yes 118293068
chr1 54941793 54941814 ZNF263 JASPAR yes 28987817
chr1 54941793 54941814 ZNF263 JASPAR yes 118293069
chr1 54941796 54941801 SP1 TRANSFAC yes 28987818
chr1 54941796 54941801 SP1 TRANSFAC yes 118293070
chr1 54941799 54941820 ZNF263 JASPAR yes 28987819
chr1 54941799 54941820 ZNF263 JASPAR yes 118293071
chr1 54941814 54941835 ZNF263 JASPAR yes 28987820
chr1 54941814 54941835 ZNF263 JASPAR yes 118293072
chr1 54941824 54941834 SP1 JASPAR yes 28987821
chr1 54941824 54941834 SP1 JASPAR yes 118293073
chr1 54941829 54941842 NFKB2 JASPAR yes 28987822
chr1 54941829 54941842 NFKB2 JASPAR yes 118293074
chr1 54941834 54941838 NFE TRANSFAC yes 28987823
chr1 54941834 54941838 NFE TRANSFAC yes 118293075
chr1 54941835 54941853 SRF JASPAR yes 28987824
chr1 54941835 54941853 SRF JASPAR yes 118293076
chr1 54941867 54941887 RREB1 JASPAR yes 28987825
chr1 54941867 54941887 RREB1 JASPAR yes 118293077
chr1 54941869 54941889 RREB1 JASPAR yes 28987826
chr1 54941869 54941889 RREB1 JASPAR yes 118293078
chr1 54941871 54941891 RREB1 JASPAR yes 28987827
chr1 54941871 54941891 RREB1 JASPAR yes 118293079
chr1 54941873 54941893 RREB1 JASPAR yes 28987828
chr1 54941873 54941893 RREB1 JASPAR yes 118293080
chr1 54941874 54941894 RREB1 JASPAR yes 28987829
chr1 54941874 54941894 RREB1 JASPAR yes 118293081
chr1 54941876 54941896 RREB1 JASPAR yes 28987830
chr1 54941876 54941896 RREB1 JASPAR yes 118293082
chr1 54941878 54941898 RREB1 JASPAR yes 28987831
chr1 54941878 54941898 RREB1 JASPAR yes 118293083
chr1 54941880 54941892 ZBTB7B JASPAR yes 28987832
chr1 54941880 54941892 ZBTB7B JASPAR yes 118293084
chr1 54941880 54941900 RREB1 JASPAR yes 28987833
chr1 54941880 54941900 RREB1 JASPAR yes 118293085
chr1 54941882 54941902 RREB1 JASPAR yes 28987834
chr1 54941882 54941902 RREB1 JASPAR yes 118293086
chr1 54941883 54941893 ZNF740 JASPAR yes 28987835
chr1 54941883 54941893 ZNF740 JASPAR yes 118293087
chr1 54941884 54941904 RREB1 JASPAR yes 28987836
chr1 54941884 54941904 RREB1 JASPAR yes 118293088
chr1 54941886 54941906 RREB1 JASPAR yes 28987837
chr1 54941886 54941906 RREB1 JASPAR yes 118293089
chr1 54941905 54941918 SMAD2 JASPAR yes 28987838
chr1 54941905 54941918 SMAD2 JASPAR yes 118293090
chr1 54941922 54941937 RUNX2 JASPAR yes 28987839
chr1 54941922 54941937 RUNX2 JASPAR yes 118293091
chr1 54941959 54941980 IRF1 JASPAR yes 28987840
chr1 54941959 54941980 IRF1 JASPAR yes 118293092
chr1 54941961 54941976 PRDM1 JASPAR yes 28987841
chr1 54941961 54941976 PRDM1 JASPAR yes 118293093
chr1 54941964 54941975 E2F6 JASPAR yes 28987842
chr1 54941964 54941975 E2F6 JASPAR yes 118293094
chr1 54941970 54941991 ZNF263 JASPAR yes 28987843
chr1 54941970 54941991 ZNF263 JASPAR yes 118293095
chr1 54941981 54941991 SP1 JASPAR yes 28987844
chr1 54941981 54941991 SP1 JASPAR yes 118293096
chr1 54941982 54941993 E2F6 JASPAR yes 28987845
chr1 54941982 54941993 E2F6 JASPAR yes 118293097
chr1 54941995 54942015 RREB1 JASPAR yes 28987846
chr1 54941995 54942015 RREB1 JASPAR yes 118293098
SNP sites on vista1662[chr1:54941776-54941995]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 54941884 rs150775511 A ACCCC,ACCCCC,ACCCCCC,ACCCCCCCC
RREB1 ZBTB7B ZNF740
320979
chr1 54941934 rs79711866 T C
RUNX2
320980
Genes possibly regulated by vista1662[chr1:54941776-54941995]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 54691105 54879152 - SSBP3 ENSG00000157216.11 54879152 0.79 1.0 730 37376
chr1 55007930 55104865 + ACOT11 ENSG00000162390.13 55007930 0.84 1.0 732 34065
Expression level of Genes
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miRNAs possibly regulated by vista1662[chr1:54941776-54941995]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results