EnhancerDB

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chrom.	Start	End	TF Name	Source	Predicted site?	id
chr1	54964098	54964112	RORA	JASPAR	yes	118293270
chr1	54964100	54964111	PHOX2A	JASPAR	yes	118293271
chr1	54964112	54964117	TFAP2A	TRANSFAC	yes	118293272
chr1	54964112	54964118	MZF1	JASPAR	yes	118293273
chr1	54964112	54964133	ZNF263	JASPAR	yes	118293274
chr1	54964114	54964120	MAZ	TRANSFAC	yes	118293275
chr1	54964114	54964125	E2F6	JASPAR	yes	118293276
chr1	54964142	54964150	HOXA5	JASPAR	yes	118293277
chr1	54964144	54964158	ONECUT3	JASPAR	yes	118293278
chr1	54964145	54964156	DUX4	JASPAR	yes	118293279
chr1	54964145	54964156	PHOX2A	JASPAR	yes	118293280
chr1	54964145	54964156	PROP1	JASPAR	yes	118293281
chr1	54964147	54964152	MYB	TRANSFAC	yes	118293282
chr1	54964148	54964169	IRF1	JASPAR	yes	118293283
chr1	54964154	54964169	FOXP1	JASPAR	yes	118293284
chr1	54964155	54964176	ZNF263	JASPAR	yes	118293285
chr1	54964159	54964180	ZNF263	JASPAR	yes	118293286
chr1	54964163	54964184	ZNF263	JASPAR	yes	118293287
chr1	54964179	54964194	TFAP2C	JASPAR	yes	118293288
chr1	54964179	54964195	GLIS1	JASPAR	yes	118293289
chr1	54964180	54964194	GLIS2	JASPAR	yes	118293290
chr1	54964180	54964194	GLIS3	JASPAR	yes	118293291
chr1	54964180	54964194	ZIC1	JASPAR	yes	118293292
chr1	54964180	54964195	ZIC3	JASPAR	yes	118293293
chr1	54964180	54964195	ZIC4	JASPAR	yes	118293294
chr1	54964181	54964195	EBF1	JASPAR	yes	118293295
chr1	54964182	54964193	EBF1	JASPAR	yes	118293296
chr1	54964190	54964203	ELF1	JASPAR	yes	118293297
chr1	54964192	54964203	ELF5	JASPAR	yes	118293298
chr1	54964203	54964222	REST	JASPAR	yes	118293299
chr1	54964208	54964218	SMAD3	JASPAR	yes	118293300
chr1	54964218	54964228	RELA	JASPAR	yes	118293301
chr1	54964241	54964253	ZBTB7B	JASPAR	yes	118293302
chr1	54964241	54964253	ZBTB7C	JASPAR	yes	118293303
chr1	54964242	54964254	ZBTB7A	JASPAR	yes	118293304
chr1	54964252	54964272	RREB1	JASPAR	yes	118293305
chr1	54964254	54964264	SP1	JASPAR	yes	118293306
chr1	54964255	54964261	SP1	TRANSFAC	yes	118293307
chr1	54964255	54964265	SP1	JASPAR	yes	118293308
chr1	54964257	54964267	ZNF740	JASPAR	yes	118293309

chrom	Position	dbSNP ID	Reference Allele	Alternative Allele	is SNP in TFBS	id
chr1	54964153	rs185548468	A	T	DUX4 IRF1 ONECUT3 PHOX2A PROP1	321250
chr1	54964163	rs112067185	T	TC	FOXP1 IRF1 ZNF263	321251
chr1	54964163	rs537923480	T	TC	FOXP1 IRF1 ZNF263	321252
chr1	54964163	rs77416924	T	C	FOXP1 IRF1 ZNF263	321253
chr1	54964186	rs553173792	C	A,G	EBF1 GLIS1 GLIS2 GLIS3 TFAP2C ZIC1 ZIC3 ZIC4	321254
chr1	54964188	rs79904655	C	G	EBF1 GLIS1 GLIS2 GLIS3 TFAP2C ZIC1 ZIC3 ZIC4	321255
chr1	54964191	rs72899641	G	A	EBF1 ELF1 GLIS1 GLIS2 GLIS3 TFAP2C ZIC1 ZIC3 ZIC4	321256
chr1	54964240	rs556018810	GCT	G	no	321257
chr1	54964257	rs547487442	C	G	RREB1 SP1 ZNF740	321258
chr1	54964265	rs184256954	C	A	RREB1 SP1 ZNF740	321259

Blank TSI value indicates lack of sufficient expression for calculation
Chrom	Start	End	Strand	Gene Name	Ensembl ID	TSS	TSI of Normal tissues	TSI of Cancer tissues	Distance between enhancer and TSS	id	More
chr1	54691105	54879152	-	SSBP3	ENSG00000157216.11	54879152	0.79	1.0	730	15074
chr1	55007930	55104865	+	ACOT11	ENSG00000162390.13	55007930	0.84	1.0	732	56344

Blank TSI value indicates lack of sufficient expression for calculation
Chrom	Start	End	Strand	miRNA Name	miRBase ID	TSS	Score	TSI of Normal tissues	TSI of Cancer tissues	id	More

No results

EnhancerDB

View enhancers around input chromosomal region

Chromosome characteristics of vista1665[chr1:54964078-54964274]

Tissue distribution of vista1665

Transcription factor that possibly regulate vista1665[chr1:54964078-54964274]

SNP sites on vista1665[chr1:54964078-54964274]

Genes possibly regulated by vista1665[chr1:54964078-54964274]

Details of Genes

Expression level of Genes

miRNAs possibly regulated by vista1665[chr1:54964078-54964274]

Details of miRNAs

Expression level of miRNAs