EnhancerDB
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  3. vista1666[chr1:54965120-54965643]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1666[chr1:54965120-54965643]
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Tissue distribution of vista1666
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Transcription factor that possibly regulate vista1666[chr1:54965120-54965643]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 54965095 54965541 CTCF UCSC Txn Factor no Conserved 107805277
chr1 54965130 54965142 INSM1 JASPAR yes 118293310
chr1 54965131 54965151 RREB1 JASPAR yes 118293311
chr1 54965133 54965153 RREB1 JASPAR yes 118293312
chr1 54965138 54965146 SP1 TRANSFAC yes 118293313
chr1 54965138 54965148 SP1 JASPAR yes 118293314
chr1 54965139 54965145 SP1 TRANSFAC yes 118293315
chr1 54965139 54965149 SP1 JASPAR yes 118293316
chr1 54965140 54965147 SP1 TRANSFAC yes 118293317
chr1 54965141 54965146 SP1 TRANSFAC yes 118293318
chr1 54965141 54965147 SP1 TRANSFAC yes 118293319
chr1 54965141 54965148 SP1 TRANSFAC yes 118293320
chr1 54965142 54965150 WT1 TRANSFAC yes 118293321
chr1 54965144 54965153 SP1 TRANSFAC yes 118293322
chr1 54965145 54965151 SP1 TRANSFAC yes 118293323
chr1 54965145 54965155 SP1 JASPAR yes 118293324
chr1 54965146 54965153 SP1 TRANSFAC yes 118293325
chr1 54965147 54965152 SP1 TRANSFAC yes 118293326
chr1 54965147 54965153 SP1 TRANSFAC yes 118293327
chr1 54965166 54965176 GCM2 JASPAR yes 118293328
chr1 54965166 54965177 GCM1 JASPAR yes 118293329
chr1 54965169 54965181 GLI2 JASPAR yes 118293330
chr1 54965170 54965182 ZBTB7A JASPAR yes 118293331
chr1 54965172 54965177 SP1 TRANSFAC yes 118293332
chr1 54965185 54965204 PAX5 JASPAR yes 118293333
chr1 54965186 54965192 SP1 TRANSFAC yes 118293334
chr1 54965186 54965196 SP1 JASPAR yes 118293335
chr1 54965237 54965250 POU3F3 JASPAR yes 118293336
chr1 54965237 54965251 POU1F1 JASPAR yes 118293337
chr1 54965238 54965250 POU3F2 JASPAR yes 118293338
chr1 54965244 54965257 HSF1 JASPAR yes 118293339
chr1 54965244 54965257 HSF2 JASPAR yes 118293340
chr1 54965248 54965263 HSF1 JASPAR yes 118293341
chr1 54965249 54965262 HSF1 JASPAR yes 118293342
chr1 54965249 54965262 HSF2 JASPAR yes 118293343
chr1 54965249 54965262 HSF4 JASPAR yes 118293344
chr1 54965257 54965261 YY1 TRANSFAC yes 118293345
chr1 54965264 54965281 ZNF410 JASPAR yes 118293346
chr1 54965272 54965282 POU6F2 JASPAR yes 118293347
chr1 54965281 54965289 FOXO3 JASPAR yes 118293348
chr1 54965283 54965302 CTCF JASPAR yes 118293349
chr1 54965314 54965325 ELK4 JASPAR yes 118293350
chr1 54965314 54965325 FLI1 JASPAR yes 118293351
chr1 54965314 54965327 ELF3 JASPAR yes 118293352
chr1 54965315 54965325 ELK1 JASPAR yes 118293353
chr1 54965315 54965325 ELK3 JASPAR yes 118293354
chr1 54965315 54965325 ERG JASPAR yes 118293355
chr1 54965315 54965325 ETS1 JASPAR yes 118293356
chr1 54965315 54965325 ETV1 JASPAR yes 118293357
chr1 54965315 54965325 ETV5 JASPAR yes 118293358
chr1 54965315 54965325 FLI1 JASPAR yes 118293359
chr1 54965315 54965325 GABPA JASPAR yes 118293360
chr1 54965315 54965326 ELF5 JASPAR yes 118293361
chr1 54965315 54965327 EHF JASPAR yes 118293362
chr1 54965315 54965327 ELF1 JASPAR yes 118293363
chr1 54965315 54965328 ELF1 JASPAR yes 118293364
chr1 54965316 54965325 ELK4 JASPAR yes 118293365
chr1 54965317 54965323 ETS1 JASPAR yes 118293366
chr1 54965317 54965323 SPI1 JASPAR yes 118293367
chr1 54965317 54965327 ELK1 JASPAR yes 118293368
chr1 54965331 54965342 E2F6 JASPAR yes 118293369
chr1 54965347 54965352 SP1 TRANSFAC yes 118293370
chr1 54965350 54965355 SP1 TRANSFAC yes 118293371
chr1 54965351 54965356 SP1 TRANSFAC yes 118293372
chr1 54965357 54965377 RREB1 JASPAR yes 118293373
chr1 54965365 54965375 SP1 JASPAR yes 118293374
chr1 54965367 54965379 INSM1 JASPAR yes 118293375
chr1 54965367 54965379 TFAP2A JASPAR yes 118293376
chr1 54965391 54965397 MAZ TRANSFAC yes 118293377
chr1 54965434 54965439 SP1 TRANSFAC yes 118293378
chr1 54965436 54965441 TFAP2A TRANSFAC yes 118293379
chr1 54965436 54965442 MZF1 JASPAR yes 118293380
chr1 54965437 54965457 RREB1 JASPAR yes 118293381
chr1 54965453 54965464 E2F1 JASPAR yes 118293382
chr1 54965454 54965459 SP1 TRANSFAC yes 118293383
chr1 54965454 54965465 E2F4 JASPAR yes 118293384
chr1 54965454 54965465 E2F6 JASPAR yes 118293385
chr1 54965455 54965460 SP1 TRANSFAC yes 118293386
chr1 54965465 54965469 NFE TRANSFAC yes 118293387
chr1 54965514 54965520 YY1 JASPAR yes 118293388
chr1 54965538 54965549 EBF1 JASPAR yes 118293389
chr1 54965543 54965557 PLAG1 JASPAR yes 118293390
chr1 54965544 54965549 SP1 TRANSFAC yes 118293391
chr1 54965559 54965565 SP1 TRANSFAC yes 118293392
chr1 54965579 54965583 H4TF2 TRANSFAC yes 118293393
chr1 54965580 54965601 ZNF263 JASPAR yes 118293394
chr1 54965583 54965604 ZNF263 JASPAR yes 118293395
chr1 54965584 54965590 ETS1 JASPAR yes 118293396
chr1 54965587 54965592 SP1 TRANSFAC yes 118293397
chr1 54965587 54965593 SP1 TRANSFAC yes 118293398
chr1 54965587 54965594 SP1 TRANSFAC yes 118293399
chr1 54965588 54965609 ZNF263 JASPAR yes 118293400
chr1 54965589 54965610 ZNF263 JASPAR yes 118293401
chr1 54965591 54965597 SP1 TRANSFAC yes 118293402
chr1 54965591 54965601 SP1 JASPAR yes 118293403
chr1 54965591 54965612 ZNF263 JASPAR yes 118293404
chr1 54965598 54965619 ZNF263 JASPAR yes 118293405
SNP sites on vista1666[chr1:54965120-54965643]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 54965126 rs545949828 A C
CTCF
321261
chr1 54965171 rs7517869 C G,T
CTCF GCM1 GCM2 GLI2 ZBTB7A
321262
chr1 54965323 rs553466034 G A,T
CTCF EHF ELF1 ELF3 ELF5 ELK1 ELK3 ELK4 ERG ETS1 ETV1 ETV5 FLI1 GABPA SPI1
321263
chr1 54965394 rs112997193 G A
CTCF MAZ
321264
chr1 54965403 rs11807531 G A
CTCF
321265
chr1 54965501 rs150382797 A G
CTCF
321266
chr1 54965556 rs169940 G A
PLAG1
321267
chr1 54965557 rs113195638 G A
PLAG1
321268
chr1 54965559 rs558388808 AC A
SP1
321269
chr1 54965578 rs113236925 C T no 321270
Genes possibly regulated by vista1666[chr1:54965120-54965643]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 54691105 54879152 - SSBP3 ENSG00000157216.11 54879152 0.79 1.0 730 14032
chr1 55007930 55104865 + ACOT11 ENSG00000162390.13 55007930 0.84 1.0 732 57713
Expression level of Genes
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miRNAs possibly regulated by vista1666[chr1:54965120-54965643]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results