EnhancerDB
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  3. vista1668[chr1:55009665-55009918]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1668[chr1:55009665-55009918]
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Tissue distribution of vista1668
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Transcription factor that possibly regulate vista1668[chr1:55009665-55009918]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 55009693 55009714 IRF1 JASPAR yes 28991308
chr1 55009693 55009714 IRF1 JASPAR yes 118293471
chr1 55009696 55009710 IRF7 JASPAR yes 28991309
chr1 55009696 55009710 IRF8 JASPAR yes 28991310
chr1 55009696 55009710 IRF7 JASPAR yes 118293472
chr1 55009696 55009710 IRF8 JASPAR yes 118293473
chr1 55009697 55009711 SPI1 JASPAR yes 28991311
chr1 55009697 55009711 SPIC JASPAR yes 28991312
chr1 55009697 55009711 SPI1 JASPAR yes 118293474
chr1 55009697 55009711 SPIC JASPAR yes 118293475
chr1 55009697 55009715 IRF2 JASPAR yes 28991313
chr1 55009697 55009715 IRF2 JASPAR yes 118293476
chr1 55009698 55009711 ELF1 JASPAR yes 28991314
chr1 55009698 55009711 ELF1 JASPAR yes 118293477
chr1 55009699 55009711 EHF JASPAR yes 28991315
chr1 55009699 55009711 ELF1 JASPAR yes 28991316
chr1 55009699 55009711 ELF4 JASPAR yes 28991317
chr1 55009699 55009711 EHF JASPAR yes 118293478
chr1 55009699 55009711 ELF1 JASPAR yes 118293479
chr1 55009699 55009711 ELF4 JASPAR yes 118293480
chr1 55009699 55009712 ELF3 JASPAR yes 28991318
chr1 55009699 55009712 ELF3 JASPAR yes 118293481
chr1 55009700 55009711 ELF5 JASPAR yes 28991319
chr1 55009700 55009711 ETV2 JASPAR yes 28991320
chr1 55009700 55009711 ELF5 JASPAR yes 118293482
chr1 55009700 55009711 ETV2 JASPAR yes 118293483
chr1 55009700 55009712 HINFP JASPAR yes 28991321
chr1 55009700 55009712 HINFP JASPAR yes 118293484
chr1 55009701 55009711 ELK1 JASPAR yes 28991322
chr1 55009701 55009711 ELK3 JASPAR yes 28991323
chr1 55009701 55009711 ERG JASPAR yes 28991324
chr1 55009701 55009711 ETS1 JASPAR yes 28991325
chr1 55009701 55009711 ETV1 JASPAR yes 28991326
chr1 55009701 55009711 ETV4 JASPAR yes 28991327
chr1 55009701 55009711 ETV5 JASPAR yes 28991328
chr1 55009701 55009711 ETV6 JASPAR yes 28991329
chr1 55009701 55009711 FEV JASPAR yes 28991330
chr1 55009701 55009711 FLI1 JASPAR yes 28991331
chr1 55009701 55009711 GABPA JASPAR yes 28991332
chr1 55009701 55009711 ELK1 JASPAR yes 118293485
chr1 55009701 55009711 ELK3 JASPAR yes 118293486
chr1 55009701 55009711 ERG JASPAR yes 118293487
chr1 55009701 55009711 ETS1 JASPAR yes 118293488
chr1 55009701 55009711 ETV1 JASPAR yes 118293489
chr1 55009701 55009711 ETV4 JASPAR yes 118293490
chr1 55009701 55009711 ETV5 JASPAR yes 118293491
chr1 55009701 55009711 ETV6 JASPAR yes 118293492
chr1 55009701 55009711 FEV JASPAR yes 118293493
chr1 55009701 55009711 FLI1 JASPAR yes 118293494
chr1 55009701 55009711 GABPA JASPAR yes 118293495
chr1 55009701 55009712 ELK4 JASPAR yes 28991333
chr1 55009701 55009712 FLI1 JASPAR yes 28991334
chr1 55009701 55009712 ELK4 JASPAR yes 118293496
chr1 55009701 55009712 FLI1 JASPAR yes 118293497
chr1 55009702 55009712 HINFP JASPAR yes 28991335
chr1 55009702 55009712 HINFP JASPAR yes 118293498
chr1 55009703 55009709 ETS1 JASPAR yes 28991336
chr1 55009703 55009709 SPI1 JASPAR yes 28991337
chr1 55009703 55009709 ETS1 JASPAR yes 118293499
chr1 55009703 55009709 SPI1 JASPAR yes 118293500
chr1 55009718 55009728 SREBF1 JASPAR yes 28991338
chr1 55009718 55009728 SREBF2 JASPAR yes 28991339
chr1 55009718 55009728 SREBF1 JASPAR yes 118293501
chr1 55009718 55009728 SREBF2 JASPAR yes 118293502
chr1 55009718 55009729 TBX2 JASPAR yes 28991340
chr1 55009718 55009729 TBX2 JASPAR yes 118293503
chr1 55009719 55009727 MGA JASPAR yes 28991341
chr1 55009719 55009727 MGA JASPAR yes 118293504
chr1 55009719 55009732 SMAD2 JASPAR yes 28991342
chr1 55009719 55009732 SMAD2 JASPAR yes 118293505
chr1 55009737 55009748 EBF1 JASPAR yes 28991343
chr1 55009737 55009748 EBF1 JASPAR yes 118293506
chr1 55009754 55009758 H4TF2 TRANSFAC yes 28991344
chr1 55009754 55009758 H4TF2 TRANSFAC yes 118293507
chr1 55009758 55009762 NFE TRANSFAC yes 28991345
chr1 55009758 55009762 NFE TRANSFAC yes 118293508
chr1 55009763 55009774 NFKB1 JASPAR yes 28991346
chr1 55009763 55009774 NFKB1 JASPAR yes 118293509
chr1 55009776 55009795 CTCF JASPAR yes 28991347
chr1 55009776 55009795 CTCF JASPAR yes 118293510
chr1 55009786 55009797 NFKB1 JASPAR yes 28991348
chr1 55009786 55009797 NFKB1 JASPAR yes 118293511
chr1 55009787 55009797 NFKB1 JASPAR yes 28991349
chr1 55009787 55009797 NFKB1 JASPAR yes 118293512
chr1 55009801 55009806 NFY TRANSFAC yes 28991350
chr1 55009801 55009806 NFY TRANSFAC yes 118293513
chr1 55009808 55009812 YY1 TRANSFAC yes 28991351
chr1 55009808 55009812 YY1 TRANSFAC yes 118293514
chr1 55009816 55009827 BATF JASPAR yes 28991352
chr1 55009816 55009827 BATF JASPAR yes 118293515
chr1 55009816 55009837 IRF1 JASPAR yes 28991353
chr1 55009816 55009837 IRF1 JASPAR yes 118293516
chr1 55009822 55009843 IRF1 JASPAR yes 28991354
chr1 55009822 55009843 IRF1 JASPAR yes 118293517
chr1 55009824 55009835 FLI1 JASPAR yes 28991355
chr1 55009824 55009835 FLI1 JASPAR yes 118293518
chr1 55009825 55009829 YY1 TRANSFAC yes 28991356
chr1 55009825 55009829 YY1 TRANSFAC yes 118293519
chr1 55009825 55009835 ETV6 JASPAR yes 28991357
chr1 55009825 55009835 ETV6 JASPAR yes 118293520
chr1 55009825 55009836 ETV2 JASPAR yes 28991358
chr1 55009825 55009836 ETV2 JASPAR yes 118293521
chr1 55009825 55009838 ELF1 JASPAR yes 28991359
chr1 55009825 55009838 ELF1 JASPAR yes 118293522
chr1 55009825 55009839 SPIC JASPAR yes 28991360
chr1 55009825 55009839 SPIC JASPAR yes 118293523
chr1 55009826 55009834 FEV JASPAR yes 28991361
chr1 55009826 55009834 FEV JASPAR yes 118293524
chr1 55009828 55009835 SPIB JASPAR yes 28991362
chr1 55009828 55009835 SPIB JASPAR yes 118293525
chr1 55009836 55009845 THAP1 JASPAR yes 28991363
chr1 55009836 55009845 THAP1 JASPAR yes 118293526
chr1 55009859 55009873 PAX6 JASPAR yes 28991364
chr1 55009859 55009873 PAX6 JASPAR yes 118293527
chr1 55009869 55009880 FOSL1 JASPAR yes 28991365
chr1 55009869 55009880 FOSL1 JASPAR yes 118293528
chr1 55009870 55009881 FOSL2 JASPAR yes 28991366
chr1 55009870 55009881 JUNB JASPAR yes 28991367
chr1 55009870 55009881 FOSL2 JASPAR yes 118293529
chr1 55009870 55009881 JUNB JASPAR yes 118293530
chr1 55009884 55009892 EHF JASPAR yes 28991368
chr1 55009884 55009892 EHF JASPAR yes 118293531
chr1 55009886 55009893 SPIB JASPAR yes 28991369
chr1 55009886 55009893 SPIB JASPAR yes 118293532
chr1 55009893 55009897 LFA1 TRANSFAC yes 28991370
chr1 55009893 55009897 LFA1 TRANSFAC yes 118293533
chr1 55009904 55009915 STAT3 JASPAR yes 28991371
chr1 55009904 55009915 STAT3 JASPAR yes 118293534
chr1 55009917 55009928 FOSL2 JASPAR yes 28991372
chr1 55009917 55009928 JUNB JASPAR yes 28991373
chr1 55009917 55009928 FOSL2 JASPAR yes 118293535
chr1 55009917 55009928 JUNB JASPAR yes 118293536
chr1 55009918 55009929 FOS JASPAR yes 28991374
chr1 55009918 55009929 FOS JASPAR yes 118293537
SNP sites on vista1668[chr1:55009665-55009918]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 55009695 rs557227229 T G
IRF1
321391
chr1 55009849 rs559973832 C T no 321392
chr1 55009874 rs113473169 A AC
FOSL1 FOSL2 JUNB
321393
chr1 55009913 rs380841 A G
STAT3
321394
Genes possibly regulated by vista1668[chr1:55009665-55009918]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 55007930 55104865 + ACOT11 ENSG00000162390.13 55007930 0.84 1.0 732 98265
chr1 55074855 55089229 - FAM151A ENSG00000162391.7 55089229 0.99 1.0 733 20689
chr1 55107459 55207981 + MROH7-TTC4 ENSG00000271723.1 55107459 0.96 0.93 734 2459
chr1 55107463 55175939 + MROH7 ENSG00000184313.15 55107463 0.9 1.0 735 2455
Expression level of Genes
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miRNAs possibly regulated by vista1668[chr1:55009665-55009918]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results