EnhancerDB
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  3. vista1673[chr1:55411305-55411465]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1673[chr1:55411305-55411465]
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Tissue distribution of vista1673
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Transcription factor that possibly regulate vista1673[chr1:55411305-55411465]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 55411260 55411435 CEBPB UCSC Txn Factor no Conserved 107805391
chr1 55411317 55411321 LFA1 TRANSFAC yes 29008975
chr1 55411317 55411321 LFA1 TRANSFAC yes 118293658
chr1 55411321 55411331 TBX21 JASPAR yes 29008976
chr1 55411321 55411331 TBX21 JASPAR yes 118293659
chr1 55411322 55411330 TBX15 JASPAR yes 29008977
chr1 55411322 55411330 TBX4 JASPAR yes 29008978
chr1 55411322 55411330 TBX15 JASPAR yes 118293660
chr1 55411322 55411330 TBX4 JASPAR yes 118293661
chr1 55411331 55411342 CEBPB JASPAR yes 29008979
chr1 55411331 55411342 CEBPB JASPAR yes 118293662
chr1 55411332 55411343 CEBPA JASPAR yes 29008980
chr1 55411332 55411343 CEBPA JASPAR yes 118293663
chr1 55411343 55411347 LFA1 TRANSFAC yes 29008981
chr1 55411343 55411347 LFA1 TRANSFAC yes 118293664
chr1 55411369 55411373 LFA1 TRANSFAC yes 29008982
chr1 55411369 55411373 LFA1 TRANSFAC yes 118293665
chr1 55411388 55411398 RELA JASPAR yes 29008983
chr1 55411388 55411398 RELA JASPAR yes 118293666
chr1 55411388 55411399 NFKB1 JASPAR yes 29008984
chr1 55411388 55411399 NFKB1 JASPAR yes 118293667
chr1 55411402 55411422 RREB1 JASPAR yes 29008985
chr1 55411402 55411422 RREB1 JASPAR yes 118293668
chr1 55411403 55411413 SP1 JASPAR yes 29008986
chr1 55411403 55411413 SP1 JASPAR yes 118293669
chr1 55411405 55411410 SP1 TRANSFAC yes 29008987
chr1 55411405 55411410 SP1 TRANSFAC yes 118293670
chr1 55411410 55411415 SP1 TRANSFAC yes 29008988
chr1 55411410 55411415 SP1 TRANSFAC yes 118293671
chr1 55411414 55411418 LFA1 TRANSFAC yes 29008989
chr1 55411414 55411418 LFA1 TRANSFAC yes 118293672
chr1 55411449 55411470 ZNF263 JASPAR yes 29008990
chr1 55411449 55411470 ZNF263 JASPAR yes 118293673
chr1 55411458 55411469 E2F6 JASPAR yes 29008991
chr1 55411458 55411469 E2F6 JASPAR yes 118293674
SNP sites on vista1673[chr1:55411305-55411465]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 55411408 rs367815364 T G
CEBPB RREB1 SP1
323512
Genes possibly regulated by vista1673[chr1:55411305-55411465]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 55315306 55352891 - DHCR24 ENSG00000116133.7 55352891 0.91 0.99 740 41586
chr1 55446465 55457966 + TMEM61 ENSG00000143001.4 55446465 0.91 1.0 741 65000
chr1 55464606 55476556 + BSND ENSG00000162399.6 55464606 1.0 0.98 742 46859
chr1 55505221 55530525 + PCSK9 ENSG00000169174.9 55505221 0.96 1.0 743 6244
Expression level of Genes
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miRNAs possibly regulated by vista1673[chr1:55411305-55411465]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results