EnhancerDB
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  3. vista1674[chr1:55413962-55414227]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1674[chr1:55413962-55414227]
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Tissue distribution of vista1674
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Transcription factor that possibly regulate vista1674[chr1:55413962-55414227]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 55413996 55414006 NFIA JASPAR yes 29009273
chr1 55413996 55414006 NFIA JASPAR yes 118293675
chr1 55413998 55414004 NFIC JASPAR yes 29009274
chr1 55413998 55414004 NFIC JASPAR yes 118293676
chr1 55414002 55414023 ZNF263 JASPAR yes 29009275
chr1 55414002 55414023 ZNF263 JASPAR yes 118293677
chr1 55414006 55414027 ZNF263 JASPAR yes 29009276
chr1 55414006 55414027 ZNF263 JASPAR yes 118293678
chr1 55414009 55414019 MZF1 JASPAR yes 29009277
chr1 55414009 55414019 MZF1 JASPAR yes 118293679
chr1 55414012 55414017 TFAP2A TRANSFAC yes 29009278
chr1 55414012 55414017 TFAP2A TRANSFAC yes 118293680
chr1 55414012 55414018 MZF1 JASPAR yes 29009279
chr1 55414012 55414018 MZF1 JASPAR yes 118293681
chr1 55414015 55414025 SP1 JASPAR yes 29009280
chr1 55414015 55414025 SP1 JASPAR yes 118293682
chr1 55414030 55414043 ELF1 JASPAR yes 29009281
chr1 55414030 55414043 ELF1 JASPAR yes 118293683
chr1 55414031 55414038 SPI1 JASPAR yes 29009282
chr1 55414031 55414038 SPI1 JASPAR yes 118293684
chr1 55414031 55414039 FEV JASPAR yes 29009283
chr1 55414031 55414039 FEV JASPAR yes 118293685
chr1 55414033 55414038 ETS2 TRANSFAC yes 29009284
chr1 55414033 55414038 ETS2 TRANSFAC yes 118293686
chr1 55414037 55414054 BCL6B JASPAR yes 29009285
chr1 55414037 55414054 BCL6B JASPAR yes 118293687
chr1 55414038 55414053 STAT1 JASPAR yes 29009286
chr1 55414038 55414053 STAT1 JASPAR yes 118293688
chr1 55414039 55414054 STAT1 JASPAR yes 29009287
chr1 55414039 55414054 STAT1 JASPAR yes 118293689
chr1 55414041 55414052 STAT3 JASPAR yes 29009288
chr1 55414041 55414052 STAT3 JASPAR yes 118293690
chr1 55414052 55414068 SOX4 JASPAR yes 29009289
chr1 55414052 55414068 SOX4 JASPAR yes 118293691
chr1 55414053 55414059 HiNF-A TRANSFAC yes 29009290
chr1 55414053 55414059 HiNF-A TRANSFAC yes 118293692
chr1 55414053 55414068 SOX21 JASPAR yes 29009291
chr1 55414053 55414068 SOX21 JASPAR yes 118293693
chr1 55414076 55414092 POU4F2 JASPAR yes 29009292
chr1 55414076 55414092 POU4F2 JASPAR yes 118293694
chr1 55414084 55414092 NKX6-1 JASPAR yes 29009293
chr1 55414084 55414092 NKX6-2 JASPAR yes 29009294
chr1 55414084 55414092 NKX6-1 JASPAR yes 118293695
chr1 55414084 55414092 NKX6-2 JASPAR yes 118293696
chr1 55414084 55414094 POU6F2 JASPAR yes 29009295
chr1 55414084 55414094 POU6F2 JASPAR yes 118293697
chr1 55414097 55414108 NFIL3 JASPAR yes 29009296
chr1 55414097 55414108 NFIL3 JASPAR yes 118293698
chr1 55414102 55414105 MYB TRANSFAC yes 29009297
chr1 55414102 55414105 MYB TRANSFAC yes 118293699
chr1 55414129 55414141 NHLH1 JASPAR yes 29009298
chr1 55414129 55414141 NHLH1 JASPAR yes 118293700
chr1 55414130 55414140 NHLH1 JASPAR yes 29009299
chr1 55414130 55414140 NHLH1 JASPAR yes 118293701
chr1 55414170 55414185 JUND JASPAR yes 29009300
chr1 55414170 55414185 JUND JASPAR yes 118293702
chr1 55414171 55414184 JUN JASPAR yes 29009301
chr1 55414171 55414184 JUN JASPAR yes 118293703
chr1 55414172 55414186 ATF7 JASPAR yes 29009302
chr1 55414172 55414186 BATF3 JASPAR yes 29009303
chr1 55414172 55414186 ATF7 JASPAR yes 118293704
chr1 55414172 55414186 BATF3 JASPAR yes 118293705
chr1 55414173 55414185 JDP2 JASPAR yes 29009304
chr1 55414173 55414185 JDP2 JASPAR yes 118293706
chr1 55414175 55414180 ATF1 TRANSFAC yes 29009305
chr1 55414175 55414180 ATF1 TRANSFAC yes 118293707
chr1 55414175 55414183 CREB1 JASPAR yes 29009306
chr1 55414175 55414183 CREB1 JASPAR yes 118293708
chr1 55414177 55414182 ATF1 TRANSFAC yes 29009307
chr1 55414177 55414182 ATF1 TRANSFAC yes 118293709
chr1 55414180 55414191 ESRRB JASPAR yes 29009308
chr1 55414180 55414191 ESRRB JASPAR yes 118293710
chr1 55414187 55414191 TEAD2 TRANSFAC yes 29009309
chr1 55414187 55414191 TEAD2 TRANSFAC yes 118293711
chr1 55414210 55414218 SP1 TRANSFAC yes 29009310
chr1 55414210 55414218 SP1 TRANSFAC yes 118293712
chr1 55414215 55414228 SMAD2 JASPAR yes 29009311
chr1 55414215 55414228 SMAD2 JASPAR yes 118293713
SNP sites on vista1674[chr1:55413962-55414227]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 55414102 rs116640032 G A
MYB NFIL3
323554
chr1 55414110 rs115583039 C A no 323555
chr1 55414193 rs555555061 T C no 323556
Genes possibly regulated by vista1674[chr1:55413962-55414227]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 55315306 55352891 - DHCR24 ENSG00000116133.7 55352891 0.91 0.99 740 38929
chr1 55446465 55457966 + TMEM61 ENSG00000143001.4 55446465 0.91 1.0 741 67762
chr1 55464606 55476556 + BSND ENSG00000162399.6 55464606 1.0 0.98 742 49621
chr1 55505221 55530525 + PCSK9 ENSG00000169174.9 55505221 0.96 1.0 743 9006
Expression level of Genes
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miRNAs possibly regulated by vista1674[chr1:55413962-55414227]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results