EnhancerDB
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  3. vista1675[chr1:55414845-55415038]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1675[chr1:55414845-55415038]
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Tissue distribution of vista1675
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Transcription factor that possibly regulate vista1675[chr1:55414845-55415038]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 55414828 55414847 RFX2 JASPAR yes 29009396
chr1 55414828 55414847 RFX2 JASPAR yes 118293714
chr1 55414850 55414861 NRF1 JASPAR yes 29009397
chr1 55414850 55414861 NRF1 JASPAR yes 118293715
chr1 55414860 55414873 NFKB1 JASPAR yes 29009398
chr1 55414860 55414873 NFKB2 JASPAR yes 29009399
chr1 55414860 55414873 NFKB1 JASPAR yes 118293716
chr1 55414860 55414873 NFKB2 JASPAR yes 118293717
chr1 55414861 55414872 NFKB1 JASPAR yes 29009400
chr1 55414861 55414872 NFKB1 JASPAR yes 118293718
chr1 55414862 55414872 NFKB1 JASPAR yes 29009401
chr1 55414862 55414872 RELA JASPAR yes 29009402
chr1 55414862 55414872 NFKB1 JASPAR yes 118293719
chr1 55414862 55414872 RELA JASPAR yes 118293720
chr1 55414871 55414875 YY1 TRANSFAC yes 29009403
chr1 55414871 55414875 YY1 TRANSFAC yes 118293721
chr1 55414875 55414879 TEAD2 TRANSFAC yes 29009404
chr1 55414875 55414879 TEAD2 TRANSFAC yes 118293722
chr1 55414875 55414880 TBP TRANSFAC yes 29009405
chr1 55414875 55414880 TBP TRANSFAC yes 118293723
chr1 55414875 55414881 TFIID TRANSFAC yes 29009406
chr1 55414875 55414881 TFIID TRANSFAC yes 118293724
chr1 55414884 55414893 ELK4 JASPAR yes 29009407
chr1 55414884 55414893 ELK4 JASPAR yes 118293725
chr1 55414886 55414901 ZBTB33 JASPAR yes 29009408
chr1 55414886 55414901 ZBTB33 JASPAR yes 118293726
chr1 55414890 55414901 EBF1 JASPAR yes 29009409
chr1 55414890 55414901 EBF1 JASPAR yes 118293727
chr1 55414895 55414902 JUN TRANSFAC yes 29009410
chr1 55414895 55414902 SP1 TRANSFAC yes 29009411
chr1 55414895 55414902 JUN TRANSFAC yes 118293728
chr1 55414895 55414902 SP1 TRANSFAC yes 118293729
chr1 55414906 55414922 RFX3 JASPAR yes 29009412
chr1 55414906 55414922 RFX3 JASPAR yes 118293730
chr1 55414921 55414933 INSM1 JASPAR yes 29009413
chr1 55414921 55414933 INSM1 JASPAR yes 118293731
chr1 55414922 55414932 MZF1 JASPAR yes 29009414
chr1 55414922 55414932 MZF1 JASPAR yes 118293732
chr1 55414930 55414945 RUNX2 JASPAR yes 29009415
chr1 55414930 55414945 RUNX2 JASPAR yes 118293733
chr1 55414941 55414952 FOS JASPAR yes 29009416
chr1 55414941 55414952 FOS JASPAR yes 118293734
chr1 55414942 55414955 DUXA JASPAR yes 29009417
chr1 55414942 55414955 DUXA JASPAR yes 118293735
chr1 55414943 55414954 DUX4 JASPAR yes 29009418
chr1 55414943 55414954 DUX4 JASPAR yes 118293736
chr1 55414956 55414966 FIGLA JASPAR yes 29009419
chr1 55414956 55414966 ID4 JASPAR yes 29009420
chr1 55414956 55414966 FIGLA JASPAR yes 118293737
chr1 55414956 55414966 ID4 JASPAR yes 118293738
chr1 55414957 55414966 SNAI2 JASPAR yes 29009421
chr1 55414957 55414966 SNAI2 JASPAR yes 118293739
chr1 55414958 55414963 USF2 TRANSFAC yes 29009422
chr1 55414958 55414963 USF2 TRANSFAC yes 118293740
chr1 55414958 55414977 REST JASPAR yes 29009423
chr1 55414958 55414977 REST JASPAR yes 118293741
chr1 55414961 55414965 NFE TRANSFAC yes 29009424
chr1 55414961 55414965 NFE TRANSFAC yes 118293742
chr1 55414964 55414970 MZF1 JASPAR yes 29009425
chr1 55414964 55414970 MZF1 JASPAR yes 118293743
chr1 55414973 55414987 CREB3L1 JASPAR yes 29009426
chr1 55414973 55414987 CREB3L1 JASPAR yes 118293744
chr1 55414991 55414995 TEAD2 TRANSFAC yes 29009427
chr1 55414991 55414995 TEAD2 TRANSFAC yes 118293745
chr1 55414999 55415009 TBX21 JASPAR yes 29009428
chr1 55414999 55415009 TBX21 JASPAR yes 118293746
chr1 55414999 55415010 TBX2 JASPAR yes 29009429
chr1 55414999 55415010 TBX2 JASPAR yes 118293747
chr1 55414999 55415012 EOMES JASPAR yes 29009430
chr1 55414999 55415012 EOMES JASPAR yes 118293748
chr1 55415000 55415010 TBR1 JASPAR yes 29009431
chr1 55415000 55415010 TBR1 JASPAR yes 118293749
chr1 55415012 55415017 SP1 TRANSFAC yes 29009432
chr1 55415012 55415017 SP1 TRANSFAC yes 118293750
SNP sites on vista1675[chr1:55414845-55415038]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 55414896 rs143308383 T C
EBF1 JUN SP1 ZBTB33
323570
chr1 55414918 rs147517380 G A
RFX3
323571
chr1 55414973 rs76971682 C G
CREB3L1 REST
323572
Genes possibly regulated by vista1675[chr1:55414845-55415038]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 55315306 55352891 - DHCR24 ENSG00000116133.7 55352891 0.91 0.99 740 38046
chr1 55446465 55457966 + TMEM61 ENSG00000143001.4 55446465 0.91 1.0 741 68573
chr1 55464606 55476556 + BSND ENSG00000162399.6 55464606 1.0 0.98 742 50432
chr1 55505221 55530525 + PCSK9 ENSG00000169174.9 55505221 0.96 1.0 743 9817
Expression level of Genes
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miRNAs possibly regulated by vista1675[chr1:55414845-55415038]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results