EnhancerDB
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  3. vista1680[chr1:55461514-55461717]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1680[chr1:55461514-55461717]
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Tissue distribution of vista1680
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Transcription factor that possibly regulate vista1680[chr1:55461514-55461717]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 55461553 55461568 NR2C2 JASPAR yes 118293953
chr1 55461564 55461577 DUXA JASPAR yes 118293954
chr1 55461565 55461576 DUX4 JASPAR yes 118293955
chr1 55461566 55461571 NFY TRANSFAC yes 118293956
chr1 55461600 55461620 RREB1 JASPAR yes 118293957
chr1 55461601 55461622 ZNF263 JASPAR yes 118293958
chr1 55461602 55461612 GCM2 JASPAR yes 118293959
chr1 55461606 55461616 TBX21 JASPAR yes 118293960
chr1 55461606 55461617 TBX20 JASPAR yes 118293961
chr1 55461607 55461615 MGA JASPAR yes 118293962
chr1 55461607 55461615 TBX15 JASPAR yes 118293963
chr1 55461607 55461615 TBX1 JASPAR yes 118293964
chr1 55461607 55461615 TBX4 JASPAR yes 118293965
chr1 55461607 55461615 TBX5 JASPAR yes 118293966
chr1 55461613 55461634 ZNF263 JASPAR yes 118293967
chr1 55461616 55461637 ZNF263 JASPAR yes 118293968
chr1 55461646 55461649 MYB TRANSFAC yes 118293969
chr1 55461646 55461656 ELK1 JASPAR yes 118293970
chr1 55461646 55461658 EHF JASPAR yes 118293971
chr1 55461646 55461658 ELF4 JASPAR yes 118293972
chr1 55461646 55461659 ELF3 JASPAR yes 118293973
chr1 55461647 55461658 ELF5 JASPAR yes 118293974
chr1 55461647 55461658 ETV2 JASPAR yes 118293975
chr1 55461648 55461658 ELK1 JASPAR yes 118293976
chr1 55461648 55461658 ELK3 JASPAR yes 118293977
chr1 55461648 55461658 ERF JASPAR yes 118293978
chr1 55461648 55461658 ERG JASPAR yes 118293979
chr1 55461648 55461658 ETS1 JASPAR yes 118293980
chr1 55461648 55461658 ETV1 JASPAR yes 118293981
chr1 55461648 55461658 ETV3 JASPAR yes 118293982
chr1 55461648 55461658 ETV4 JASPAR yes 118293983
chr1 55461648 55461658 ETV5 JASPAR yes 118293984
chr1 55461648 55461658 FEV JASPAR yes 118293985
chr1 55461648 55461658 FLI1 JASPAR yes 118293986
chr1 55461650 55461656 ETS1 JASPAR yes 118293987
chr1 55461650 55461656 SPI1 JASPAR yes 118293988
chr1 55461652 55461673 ZNF263 JASPAR yes 118293989
chr1 55461658 55461675 ZNF410 JASPAR yes 118293990
chr1 55461660 55461677 RARA JASPAR yes 118293991
chr1 55461660 55461677 RXRA JASPAR yes 118293992
chr1 55461665 55461675 SP1 JASPAR yes 118293993
chr1 55461667 55461673 MAZ TRANSFAC yes 118293994
chr1 55461670 55461690 TP53 JASPAR yes 118293995
chr1 55461671 55461692 ZNF263 JASPAR yes 118293996
chr1 55461672 55461676 LFA1 TRANSFAC yes 118293997
chr1 55461681 55461686 TFAP2A TRANSFAC yes 118293998
chr1 55461681 55461687 MZF1 JASPAR yes 118293999
chr1 55461684 55461690 PEA3 TRANSFAC yes 118294000
SNP sites on vista1680[chr1:55461514-55461717]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 55461572 rs184845648 G T
DUX4 DUXA
324067
chr1 55461600 rs545805617 T G
RREB1
324068
chr1 55461680 rs2495484 C T
TP53 ZNF263
324069
Genes possibly regulated by vista1680[chr1:55461514-55461717]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 55446465 55457966 + TMEM61 ENSG00000143001.4 55446465 0.91 1.0 741 84951
chr1 55464606 55476556 + BSND ENSG00000162399.6 55464606 1.0 0.98 742 97111
chr1 55505221 55530525 + PCSK9 ENSG00000169174.9 55505221 0.96 1.0 743 56496
Expression level of Genes
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miRNAs possibly regulated by vista1680[chr1:55461514-55461717]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results