EnhancerDB
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  3. vista1682[chr1:55594097-55594408]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1682[chr1:55594097-55594408]
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Tissue distribution of vista1682
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Transcription factor that possibly regulate vista1682[chr1:55594097-55594408]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 55594086 55594098 PKNOX1 JASPAR yes 29014978
chr1 55594086 55594098 TGIF1 JASPAR yes 29014979
chr1 55594086 55594098 TGIF2 JASPAR yes 29014980
chr1 55594086 55594098 PKNOX1 JASPAR yes 118294009
chr1 55594086 55594098 TGIF1 JASPAR yes 118294010
chr1 55594086 55594098 TGIF2 JASPAR yes 118294011
chr1 55594091 55594112 ZNF263 JASPAR yes 29014981
chr1 55594091 55594112 ZNF263 JASPAR yes 118294012
chr1 55594108 55594114 TCF4 TRANSFAC yes 29014982
chr1 55594108 55594114 TCF4 TRANSFAC yes 118294013
chr1 55594155 55594176 ZNF263 JASPAR yes 29014983
chr1 55594155 55594176 ZNF263 JASPAR yes 118294014
chr1 55594162 55594183 ZNF263 JASPAR yes 29014984
chr1 55594162 55594183 ZNF263 JASPAR yes 118294015
chr1 55594174 55594182 EHF JASPAR yes 29014985
chr1 55594174 55594182 EHF JASPAR yes 118294016
chr1 55594174 55594195 ZNF263 JASPAR yes 29014986
chr1 55594174 55594195 ZNF263 JASPAR yes 118294017
chr1 55594176 55594181 ETS2 TRANSFAC yes 29014987
chr1 55594176 55594181 ETS2 TRANSFAC yes 118294018
chr1 55594202 55594213 E2F6 JASPAR yes 29014988
chr1 55594202 55594213 E2F6 JASPAR yes 118294019
chr1 55594209 55594224 FOXA1 JASPAR yes 29014989
chr1 55594209 55594224 FOXA1 JASPAR yes 118294020
chr1 55594211 55594223 FOXC2 JASPAR yes 29014990
chr1 55594211 55594223 FOXC2 JASPAR yes 118294021
chr1 55594211 55594225 FOXF2 JASPAR yes 29014991
chr1 55594211 55594225 FOXF2 JASPAR yes 118294022
chr1 55594212 55594223 FOXB1 JASPAR yes 29014992
chr1 55594212 55594223 FOXC1 JASPAR yes 29014993
chr1 55594212 55594223 FOXB1 JASPAR yes 118294023
chr1 55594212 55594223 FOXC1 JASPAR yes 118294024
chr1 55594213 55594217 YY1 TRANSFAC yes 29014994
chr1 55594213 55594217 YY1 TRANSFAC yes 118294025
chr1 55594213 55594224 FOXA1 JASPAR yes 29014995
chr1 55594213 55594224 FOXA1 JASPAR yes 118294026
chr1 55594226 55594231 H4TF1 TRANSFAC yes 29014996
chr1 55594226 55594231 H4TF1 TRANSFAC yes 118294027
chr1 55594230 55594244 FOXF2 JASPAR yes 29014997
chr1 55594230 55594244 FOXF2 JASPAR yes 118294028
chr1 55594231 55594242 FOXA1 JASPAR yes 29014998
chr1 55594231 55594242 FOXA1 JASPAR yes 118294029
chr1 55594231 55594246 FOXA1 JASPAR yes 29014999
chr1 55594231 55594246 FOXA1 JASPAR yes 118294030
chr1 55594232 55594243 FOXB1 JASPAR yes 29015000
chr1 55594232 55594243 FOXC1 JASPAR yes 29015001
chr1 55594232 55594243 FOXB1 JASPAR yes 118294031
chr1 55594232 55594243 FOXC1 JASPAR yes 118294032
chr1 55594232 55594244 FOXC2 JASPAR yes 29015002
chr1 55594232 55594244 FOXC2 JASPAR yes 118294033
chr1 55594233 55594251 NR3C1 JASPAR yes 29015003
chr1 55594233 55594251 NR3C1 JASPAR yes 118294034
chr1 55594234 55594249 HNF1A JASPAR yes 29015004
chr1 55594234 55594249 HNF1A JASPAR yes 118294035
chr1 55594235 55594248 HNF1B JASPAR yes 29015005
chr1 55594235 55594248 HNF1B JASPAR yes 118294036
chr1 55594242 55594253 CEBPA JASPAR yes 29015006
chr1 55594242 55594253 CEBPA JASPAR yes 118294037
chr1 55594247 55594251 H1TF2 TRANSFAC yes 29015007
chr1 55594247 55594251 NFE TRANSFAC yes 29015008
chr1 55594247 55594251 SRF TRANSFAC yes 29015009
chr1 55594247 55594251 H1TF2 TRANSFAC yes 118294038
chr1 55594247 55594251 NFE TRANSFAC yes 118294039
chr1 55594247 55594251 SRF TRANSFAC yes 118294040
chr1 55594267 55594271 YY1 TRANSFAC yes 29015010
chr1 55594267 55594271 YY1 TRANSFAC yes 118294041
chr1 55594282 55594290 FEV JASPAR yes 29015011
chr1 55594282 55594290 FEV JASPAR yes 118294042
chr1 55594285 55594303 RARA JASPAR yes 29015012
chr1 55594285 55594303 RARA JASPAR yes 118294043
chr1 55594288 55594291 MYB TRANSFAC yes 29015013
chr1 55594288 55594291 MYB TRANSFAC yes 118294044
chr1 55594292 55594305 NR2F1 JASPAR yes 29015014
chr1 55594292 55594305 NR2F1 JASPAR yes 118294045
chr1 55594315 55594319 H1TF2 TRANSFAC yes 29015015
chr1 55594315 55594319 NFE TRANSFAC yes 29015016
chr1 55594315 55594319 SRF TRANSFAC yes 29015017
chr1 55594315 55594319 H1TF2 TRANSFAC yes 118294046
chr1 55594315 55594319 NFE TRANSFAC yes 118294047
chr1 55594315 55594319 SRF TRANSFAC yes 118294048
chr1 55594317 55594328 DMRT3 JASPAR yes 29015018
chr1 55594317 55594328 DMRT3 JASPAR yes 118294049
chr1 55594321 55594324 MYB TRANSFAC yes 29015019
chr1 55594321 55594324 MYB TRANSFAC yes 118294050
chr1 55594327 55594348 ZNF263 JASPAR yes 29015020
chr1 55594327 55594348 ZNF263 JASPAR yes 118294051
chr1 55594330 55594351 ZNF263 JASPAR yes 29015021
chr1 55594330 55594351 ZNF263 JASPAR yes 118294052
chr1 55594335 55594345 MZF1 JASPAR yes 29015022
chr1 55594335 55594345 MZF1 JASPAR yes 118294053
chr1 55594338 55594344 SP1 TRANSFAC yes 29015023
chr1 55594338 55594344 SP1 TRANSFAC yes 118294054
chr1 55594338 55594348 SP1 JASPAR yes 29015024
chr1 55594338 55594348 SP1 JASPAR yes 118294055
chr1 55594380 55594401 IRF1 JASPAR yes 29015025
chr1 55594380 55594401 IRF1 JASPAR yes 118294056
chr1 55594381 55594402 IRF1 JASPAR yes 29015026
chr1 55594381 55594402 IRF1 JASPAR yes 118294057
chr1 55594382 55594403 IRF1 JASPAR yes 29015027
chr1 55594382 55594403 IRF1 JASPAR yes 118294058
chr1 55594383 55594404 IRF1 JASPAR yes 29015028
chr1 55594383 55594404 IRF1 JASPAR yes 118294059
chr1 55594384 55594399 FOXP1 JASPAR yes 29015029
chr1 55594384 55594399 FOXP1 JASPAR yes 118294060
chr1 55594384 55594405 IRF1 JASPAR yes 29015030
chr1 55594384 55594405 IRF1 JASPAR yes 118294061
chr1 55594385 55594400 FOXP1 JASPAR yes 29015031
chr1 55594385 55594400 FOXP1 JASPAR yes 118294062
chr1 55594385 55594406 IRF1 JASPAR yes 29015032
chr1 55594385 55594406 IRF1 JASPAR yes 118294063
chr1 55594386 55594401 FOXP1 JASPAR yes 29015033
chr1 55594386 55594401 FOXP1 JASPAR yes 118294064
chr1 55594386 55594407 IRF1 JASPAR yes 29015034
chr1 55594386 55594407 IRF1 JASPAR yes 118294065
chr1 55594387 55594402 FOXP1 JASPAR yes 29015035
chr1 55594387 55594402 FOXP1 JASPAR yes 118294066
chr1 55594388 55594403 FOXP1 JASPAR yes 29015036
chr1 55594388 55594403 FOXP1 JASPAR yes 118294067
chr1 55594389 55594404 FOXP1 JASPAR yes 29015037
chr1 55594389 55594404 FOXP1 JASPAR yes 118294068
chr1 55594390 55594405 FOXP1 JASPAR yes 29015038
chr1 55594390 55594405 FOXP1 JASPAR yes 118294069
chr1 55594391 55594406 FOXP1 JASPAR yes 29015039
chr1 55594391 55594406 FOXP1 JASPAR yes 118294070
chr1 55594392 55594407 FOXP1 JASPAR yes 29015040
chr1 55594392 55594407 FOXP1 JASPAR yes 118294071
chr1 55594393 55594408 FOXP1 JASPAR yes 29015041
chr1 55594393 55594408 FOXP1 JASPAR yes 118294072
chr1 55594394 55594409 FOXP1 JASPAR yes 29015042
chr1 55594394 55594409 FOXP1 JASPAR yes 118294073
SNP sites on vista1682[chr1:55594097-55594408]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 55594168 rs567626120 C T
ZNF263
324389
chr1 55594208 rs568972442 C T
E2F6
324390
chr1 55594347 rs74073039 C A
SP1 ZNF263
324391
chr1 55594348 rs74073040 C G
SP1 ZNF263
324392
chr1 55594384 rs201419348 AC A
FOXP1 IRF1
324393
chr1 55594384 rs770539816 AC A
FOXP1 IRF1
324394
Genes possibly regulated by vista1682[chr1:55594097-55594408]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 55505221 55530525 + PCSK9 ENSG00000169174.9 55505221 0.96 1.0 743 11124
chr1 55532032 55680786 - USP24 ENSG00000162402.8 55680786 0.67 0.99 744 13622
Expression level of Genes
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miRNAs possibly regulated by vista1682[chr1:55594097-55594408]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results