EnhancerDB
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  3. vista1683[chr1:55650535-55650650]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1683[chr1:55650535-55650650]
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Tissue distribution of vista1683
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Transcription factor that possibly regulate vista1683[chr1:55650535-55650650]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 55650547 55650560 POU2F2 JASPAR yes 118294074
chr1 55650549 55650563 IRF7 JASPAR yes 118294075
chr1 55650553 55650565 POU3F1 JASPAR yes 118294076
chr1 55650553 55650565 POU3F2 JASPAR yes 118294077
chr1 55650553 55650566 POU3F3 JASPAR yes 118294078
chr1 55650554 55650566 POU2F1 JASPAR yes 118294079
chr1 55650562 55650566 TEAD2 TRANSFAC yes 118294080
chr1 55650567 55650571 TEAD2 TRANSFAC yes 118294081
chr1 55650567 55650572 TBP TRANSFAC yes 118294082
chr1 55650567 55650573 TFIID TRANSFAC yes 118294083
chr1 55650594 55650609 LEF1 JASPAR yes 118294084
chr1 55650599 55650614 PRDM1 JASPAR yes 118294085
chr1 55650608 55650623 FOXA1 JASPAR yes 118294086
chr1 55650609 55650621 FOXI1 JASPAR yes 118294087
chr1 55650609 55650624 FOXP1 JASPAR yes 118294088
chr1 55650610 55650622 FOXC2 JASPAR yes 118294089
chr1 55650612 55650623 FOXA1 JASPAR yes 118294090
chr1 55650621 55650642 IRF1 JASPAR yes 118294091
chr1 55650625 55650637 IRF1 JASPAR yes 118294092
chr1 55650626 55650641 MEF2A JASPAR yes 118294093
chr1 55650627 55650642 FOXP1 JASPAR yes 118294094
chr1 55650627 55650642 MEF2C JASPAR yes 118294095
chr1 55650627 55650648 IRF1 JASPAR yes 118294096
chr1 55650628 55650640 FOXC2 JASPAR yes 118294097
chr1 55650628 55650640 MEF2A JASPAR yes 118294098
chr1 55650628 55650640 MEF2B JASPAR yes 118294099
chr1 55650628 55650640 MEF2D JASPAR yes 118294100
chr1 55650629 55650639 MEF2A JASPAR yes 118294101
chr1 55650630 55650634 YY1 TRANSFAC yes 118294102
chr1 55650631 55650643 IRF1 JASPAR yes 118294103
chr1 55650631 55650645 IRF7 JASPAR yes 118294104
chr1 55650633 55650648 FOXP1 JASPAR yes 118294105
chr1 55650634 55650646 FOXC2 JASPAR yes 118294106
chr1 55650636 55650640 YY1 TRANSFAC yes 118294107
SNP sites on vista1683[chr1:55650535-55650650]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 55650535 rs150879461 C T no 324423
chr1 55650538 rs575319148 G A,T no 324424
chr1 55650638 rs147392101 A AT
FOXC2 FOXP1 IRF1 IRF7 MEF2A MEF2B MEF2C MEF2D YY1
324425
chr1 55650642 rs11577522 T A
FOXC2 FOXP1 IRF1 IRF7 MEF2C
324426
Genes possibly regulated by vista1683[chr1:55650535-55650650]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 55532032 55680786 - USP24 ENSG00000162402.8 55680786 0.67 0.99 744 69864
Expression level of Genes
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miRNAs possibly regulated by vista1683[chr1:55650535-55650650]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results