EnhancerDB
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  3. vista1687[chr1:55753963-55754247]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1687[chr1:55753963-55754247]
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Tissue distribution of vista1687
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Transcription factor that possibly regulate vista1687[chr1:55753963-55754247]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 55753872 55754250 EBF1 UCSC Txn Factor no Conserved 107805573
chr1 55753893 55754319 EP300 UCSC Txn Factor no Conserved 107805577
chr1 55753961 55753971 MAX JASPAR yes 29025641
chr1 55753961 55753971 MAX JASPAR yes 118294187
chr1 55753971 55753984 SMAD2 JASPAR yes 29025642
chr1 55753971 55753984 SMAD2 JASPAR yes 118294188
chr1 55753986 55753990 TEAD2 TRANSFAC yes 29025643
chr1 55753986 55753990 TEAD2 TRANSFAC yes 118294189
chr1 55753986 55753991 TBP TRANSFAC yes 29025644
chr1 55753986 55753991 TBP TRANSFAC yes 118294190
chr1 55753995 55754009 EBF1 JASPAR yes 29025645
chr1 55753995 55754009 EBF1 JASPAR yes 118294191
chr1 55753996 55754011 TFAP2C JASPAR yes 29025646
chr1 55753996 55754011 TFAP2C JASPAR yes 118294192
chr1 55753997 55754008 EBF1 JASPAR yes 29025647
chr1 55753997 55754008 EBF1 JASPAR yes 118294193
chr1 55754001 55754006 TFAP2A TRANSFAC yes 29025648
chr1 55754001 55754006 TFAP2A TRANSFAC yes 118294194
chr1 55754001 55754007 MZF1 JASPAR yes 29025649
chr1 55754001 55754007 MZF1 JASPAR yes 118294195
chr1 55754018 55754024 YY1 JASPAR yes 29025650
chr1 55754018 55754024 YY1 JASPAR yes 118294196
chr1 55754038 55754043 SP1 TRANSFAC yes 29025651
chr1 55754038 55754043 SP1 TRANSFAC yes 118294197
chr1 55754048 55754056 OTX2 JASPAR yes 29025652
chr1 55754048 55754056 OTX2 JASPAR yes 118294198
chr1 55754069 55754083 EBF1 JASPAR yes 29025653
chr1 55754069 55754083 EBF1 JASPAR yes 118294199
chr1 55754070 55754081 EBF1 JASPAR yes 29025654
chr1 55754070 55754081 EBF1 JASPAR yes 118294200
chr1 55754070 55754086 ZNF143 JASPAR yes 29025655
chr1 55754070 55754086 ZNF143 JASPAR yes 118294201
chr1 55754071 55754082 EBF1 JASPAR yes 29025656
chr1 55754071 55754082 EBF1 JASPAR yes 118294202
chr1 55754071 55754085 PLAG1 JASPAR yes 29025657
chr1 55754071 55754085 PLAG1 JASPAR yes 118294203
chr1 55754077 55754082 SP1 TRANSFAC yes 29025658
chr1 55754077 55754082 SP1 TRANSFAC yes 118294204
chr1 55754089 55754107 NR3C1 JASPAR yes 29025659
chr1 55754089 55754107 NR3C1 JASPAR yes 118294205
chr1 55754095 55754110 HSF1 JASPAR yes 29025660
chr1 55754095 55754110 HSF1 JASPAR yes 118294206
chr1 55754096 55754109 HSF1 JASPAR yes 29025661
chr1 55754096 55754109 HSF2 JASPAR yes 29025662
chr1 55754096 55754109 HSF4 JASPAR yes 29025663
chr1 55754096 55754109 HSF1 JASPAR yes 118294207
chr1 55754096 55754109 HSF2 JASPAR yes 118294208
chr1 55754096 55754109 HSF4 JASPAR yes 118294209
chr1 55754101 55754122 IRF1 JASPAR yes 29025664
chr1 55754101 55754122 IRF1 JASPAR yes 118294210
chr1 55754103 55754118 IRF9 JASPAR yes 29025665
chr1 55754103 55754118 IRF9 JASPAR yes 118294211
chr1 55754104 55754118 IRF7 JASPAR yes 29025666
chr1 55754104 55754118 IRF8 JASPAR yes 29025667
chr1 55754104 55754118 IRF7 JASPAR yes 118294212
chr1 55754104 55754118 IRF8 JASPAR yes 118294213
chr1 55754105 55754119 STAT1 JASPAR yes 29025668
chr1 55754105 55754119 STAT1 JASPAR yes 118294214
chr1 55754105 55754120 STAT2 JASPAR yes 29025669
chr1 55754105 55754120 STAT2 JASPAR yes 118294215
chr1 55754105 55754123 IRF2 JASPAR yes 29025670
chr1 55754105 55754123 IRF2 JASPAR yes 118294216
chr1 55754106 55754118 IRF1 JASPAR yes 29025671
chr1 55754106 55754118 IRF1 JASPAR yes 118294217
chr1 55754116 55754126 SREBF2 JASPAR yes 29025672
chr1 55754116 55754126 SREBF2 JASPAR yes 118294218
chr1 55754122 55754127 ATF1 TRANSFAC yes 29025673
chr1 55754122 55754127 ATF1 TRANSFAC yes 118294219
chr1 55754149 55754160 NRL JASPAR yes 29025674
chr1 55754149 55754160 NRL JASPAR yes 118294220
chr1 55754167 55754178 ELK4 JASPAR yes 29025675
chr1 55754167 55754178 FLI1 JASPAR yes 29025676
chr1 55754167 55754178 ELK4 JASPAR yes 118294221
chr1 55754167 55754178 FLI1 JASPAR yes 118294222
chr1 55754167 55754180 ELF3 JASPAR yes 29025677
chr1 55754167 55754180 ELF3 JASPAR yes 118294223
chr1 55754168 55754172 YY1 TRANSFAC yes 29025678
chr1 55754168 55754172 YY1 TRANSFAC yes 118294224
chr1 55754168 55754179 ELF5 JASPAR yes 29025679
chr1 55754168 55754179 ELF5 JASPAR yes 118294225
chr1 55754168 55754180 EHF JASPAR yes 29025680
chr1 55754168 55754180 ELF1 JASPAR yes 29025681
chr1 55754168 55754180 EHF JASPAR yes 118294226
chr1 55754168 55754180 ELF1 JASPAR yes 118294227
chr1 55754168 55754181 ELF1 JASPAR yes 29025682
chr1 55754168 55754181 ELF1 JASPAR yes 118294228
chr1 55754169 55754177 FEV JASPAR yes 29025683
chr1 55754169 55754177 FEV JASPAR yes 118294229
chr1 55754188 55754193 SP1 TRANSFAC yes 29025684
chr1 55754188 55754193 SP1 TRANSFAC yes 118294230
chr1 55754192 55754196 ESR1 TRANSFAC yes 29025685
chr1 55754192 55754196 ESR1 TRANSFAC yes 118294231
chr1 55754211 55754216 SP1 TRANSFAC yes 29025686
chr1 55754211 55754216 SP1 TRANSFAC yes 118294232
SNP sites on vista1687[chr1:55753963-55754247]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 55754060 rs569741499 G A
EBF1 EP300
325382
chr1 55754134 rs188161668 C A
EBF1 EP300
325383
chr1 55754190 rs535043370 G T
EBF1 EP300 SP1
325384
chr1 55754205 rs146250047 C T
EBF1 EP300
325385
chr1 55754245 rs183595371 T G
EBF1 EP300
325386
Genes possibly regulated by vista1687[chr1:55753963-55754247]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 55532032 55680786 - USP24 ENSG00000162402.8 55680786 0.67 0.99 744 26823
Expression level of Genes
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miRNAs possibly regulated by vista1687[chr1:55753963-55754247]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results