EnhancerDB
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  3. vista16996[chr13:110147333-110147690]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista16996[chr13:110147333-110147690]
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Tissue distribution of vista16996
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Transcription factor that possibly regulate vista16996[chr13:110147333-110147690]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr13 110147327 110147341 BATF3 JASPAR yes 19340321
chr13 110147327 110147341 BATF3 JASPAR yes 60272442
chr13 110147328 110147343 JUND JASPAR yes 19340322
chr13 110147328 110147343 JUND JASPAR yes 60272443
chr13 110147346 110147350 TEAD2 TRANSFAC yes 19340323
chr13 110147346 110147350 TEAD2 TRANSFAC yes 60272444
chr13 110147364 110147368 YY1 TRANSFAC yes 19340324
chr13 110147364 110147368 YY1 TRANSFAC yes 60272445
chr13 110147364 110147381 BCL6B JASPAR yes 19340325
chr13 110147364 110147381 BCL6B JASPAR yes 60272446
chr13 110147375 110147394 RFX2 JASPAR yes 19340326
chr13 110147375 110147394 RFX2 JASPAR yes 60272447
chr13 110147377 110147392 RFX5 JASPAR yes 19340327
chr13 110147377 110147392 RFX5 JASPAR yes 60272448
chr13 110147388 110147405 NR3C1 JASPAR yes 19340328
chr13 110147388 110147405 NR3C2 JASPAR yes 19340329
chr13 110147388 110147405 NR3C1 JASPAR yes 60272449
chr13 110147388 110147405 NR3C2 JASPAR yes 60272450
chr13 110147390 110147405 AR JASPAR yes 19340330
chr13 110147390 110147405 AR JASPAR yes 60272451
chr13 110147403 110147409 NFIC JASPAR yes 19340331
chr13 110147403 110147409 NFIC JASPAR yes 60272452
chr13 110147405 110147409 H1TF2 TRANSFAC yes 19340332
chr13 110147405 110147409 NFE TRANSFAC yes 19340333
chr13 110147405 110147409 SRF TRANSFAC yes 19340334
chr13 110147405 110147409 H1TF2 TRANSFAC yes 60272453
chr13 110147405 110147409 NFE TRANSFAC yes 60272454
chr13 110147405 110147409 SRF TRANSFAC yes 60272455
chr13 110147416 110147427 NRL JASPAR yes 19340335
chr13 110147416 110147427 NRL JASPAR yes 60272456
chr13 110147433 110147438 H4TF1 TRANSFAC yes 19340336
chr13 110147433 110147438 H4TF1 TRANSFAC yes 60272457
chr13 110147446 110147461 FOXP1 JASPAR yes 19340337
chr13 110147446 110147461 FOXP1 JASPAR yes 60272458
chr13 110147447 110147458 FOXP2 JASPAR yes 19340338
chr13 110147447 110147458 FOXP2 JASPAR yes 60272459
chr13 110147451 110147462 STAT3 JASPAR yes 19340339
chr13 110147451 110147462 STAT3 JASPAR yes 60272460
chr13 110147452 110147467 HSF1 JASPAR yes 19340340
chr13 110147452 110147467 HSF1 JASPAR yes 60272461
chr13 110147453 110147466 HSF2 JASPAR yes 19340341
chr13 110147453 110147466 HSF2 JASPAR yes 60272462
chr13 110147469 110147479 ELK1 JASPAR yes 19340342
chr13 110147469 110147479 ELK1 JASPAR yes 60272463
chr13 110147470 110147481 ETV2 JASPAR yes 19340343
chr13 110147470 110147481 ETV2 JASPAR yes 60272464
chr13 110147471 110147481 ERF JASPAR yes 19340344
chr13 110147471 110147481 ERG JASPAR yes 19340345
chr13 110147471 110147481 ETS1 JASPAR yes 19340346
chr13 110147471 110147481 FEV JASPAR yes 19340347
chr13 110147471 110147481 FLI1 JASPAR yes 19340348
chr13 110147471 110147481 ERF JASPAR yes 60272465
chr13 110147471 110147481 ERG JASPAR yes 60272466
chr13 110147471 110147481 ETS1 JASPAR yes 60272467
chr13 110147471 110147481 FEV JASPAR yes 60272468
chr13 110147471 110147481 FLI1 JASPAR yes 60272469
chr13 110147471 110147482 ELK4 JASPAR yes 19340349
chr13 110147471 110147482 FLI1 JASPAR yes 19340350
chr13 110147471 110147482 ELK4 JASPAR yes 60272470
chr13 110147471 110147482 FLI1 JASPAR yes 60272471
chr13 110147473 110147479 ETS1 JASPAR yes 19340351
chr13 110147473 110147479 ETS1 JASPAR yes 60272472
chr13 110147484 110147490 SOX10 JASPAR yes 19340352
chr13 110147484 110147490 SOX10 JASPAR yes 60272473
chr13 110147491 110147502 NFE2 JASPAR yes 19340353
chr13 110147491 110147502 NFE2 JASPAR yes 60272474
chr13 110147492 110147501 JDP2 JASPAR yes 19340354
chr13 110147492 110147501 JDP2 JASPAR yes 60272475
chr13 110147529 110147534 SP1 TRANSFAC yes 19340355
chr13 110147529 110147534 SP1 TRANSFAC yes 60272476
chr13 110147529 110147535 SP1 TRANSFAC yes 19340356
chr13 110147529 110147535 SP1 TRANSFAC yes 60272477
chr13 110147534 110147548 FOXF2 JASPAR yes 19340357
chr13 110147534 110147548 FOXF2 JASPAR yes 60272478
chr13 110147536 110147547 HOXD12 JASPAR yes 19340358
chr13 110147536 110147547 HOXD12 JASPAR yes 60272479
chr13 110147537 110147548 CDX2 JASPAR yes 19340359
chr13 110147537 110147548 CDX2 JASPAR yes 60272480
chr13 110147543 110147548 H4TF1 TRANSFAC yes 19340360
chr13 110147543 110147548 H4TF1 TRANSFAC yes 60272481
chr13 110147549 110147554 TFAP2A TRANSFAC yes 19340361
chr13 110147549 110147554 TFAP2A TRANSFAC yes 60272482
chr13 110147549 110147555 MZF1 JASPAR yes 19340362
chr13 110147549 110147555 MZF1 JASPAR yes 60272483
chr13 110147552 110147557 GATA2 JASPAR yes 19340363
chr13 110147552 110147557 GATA2 JASPAR yes 60272484
chr13 110147555 110147559 YY1 TRANSFAC yes 19340364
chr13 110147555 110147559 YY1 TRANSFAC yes 60272485
chr13 110147567 110147571 TEAD2 TRANSFAC yes 19340365
chr13 110147567 110147571 TEAD2 TRANSFAC yes 60272486
chr13 110147568 110147584 E2F2 JASPAR yes 19340366
chr13 110147568 110147584 E2F2 JASPAR yes 60272487
chr13 110147585 110147594 SRY JASPAR yes 19340367
chr13 110147585 110147594 SRY JASPAR yes 60272488
chr13 110147591 110147606 MEF2A JASPAR yes 19340368
chr13 110147591 110147606 MEF2A JASPAR yes 60272489
chr13 110147592 110147607 MEF2C JASPAR yes 19340369
chr13 110147592 110147607 MEF2C JASPAR yes 60272490
chr13 110147593 110147605 MEF2A JASPAR yes 19340370
chr13 110147593 110147605 MEF2B JASPAR yes 19340371
chr13 110147593 110147605 MEF2D JASPAR yes 19340372
chr13 110147593 110147605 MEF2A JASPAR yes 60272491
chr13 110147593 110147605 MEF2B JASPAR yes 60272492
chr13 110147593 110147605 MEF2D JASPAR yes 60272493
chr13 110147594 110147604 MEF2A JASPAR yes 19340373
chr13 110147594 110147604 MEF2A JASPAR yes 60272494
chr13 110147595 110147599 YY1 TRANSFAC yes 19340374
chr13 110147595 110147599 YY1 TRANSFAC yes 60272495
chr13 110147629 110147634 ATF1 TRANSFAC yes 19340375
chr13 110147629 110147634 ATF1 TRANSFAC yes 60272496
chr13 110147629 110147637 CREB1 JASPAR yes 19340376
chr13 110147629 110147637 CREB1 JASPAR yes 60272497
chr13 110147631 110147636 ATF1 TRANSFAC yes 19340377
chr13 110147631 110147636 ATF1 TRANSFAC yes 60272498
chr13 110147640 110147651 CDX2 JASPAR yes 19340378
chr13 110147640 110147651 CDX2 JASPAR yes 60272499
chr13 110147641 110147652 HOXC13 JASPAR yes 19340379
chr13 110147641 110147652 HOXC13 JASPAR yes 60272500
chr13 110147655 110147660 GATA2 JASPAR yes 19340380
chr13 110147655 110147660 GATA2 JASPAR yes 60272501
chr13 110147658 110147662 TEAD2 TRANSFAC yes 19340381
chr13 110147658 110147662 TEAD2 TRANSFAC yes 60272502
chr13 110147658 110147663 TBP TRANSFAC yes 19340382
chr13 110147658 110147663 TBP TRANSFAC yes 60272503
chr13 110147670 110147674 YY1 TRANSFAC yes 19340383
chr13 110147670 110147674 YY1 TRANSFAC yes 60272504
chr13 110147670 110147681 TBX20 JASPAR yes 19340384
chr13 110147670 110147681 TBX20 JASPAR yes 60272505
chr13 110147675 110147686 CEBPB JASPAR yes 19340385
chr13 110147675 110147686 CEBPB JASPAR yes 60272506
SNP sites on vista16996[chr13:110147333-110147690]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr13 110147359 rs143051954 G GT no 3385344
chr13 110147495 rs114919833 G A
JDP2 NFE2
3385345
chr13 110147532 rs115506500 G A,C
SP1
3385346
chr13 110147580 rs7323814 C G
E2F2
3385347
chr13 110147686 rs74601739 A G
CEBPB
3385348
Genes possibly regulated by vista16996[chr13:110147333-110147690]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista16996[chr13:110147333-110147690]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results