EnhancerDB
  1. Home
  2. Enhancers
  3. vista17015[chr13:110521819-110522258]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista17015[chr13:110521819-110522258]
Back to top
Tissue distribution of vista17015
Back to top
Transcription factor that possibly regulate vista17015[chr13:110521819-110522258]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr13 110521920 110522317 USF1 UCSC Txn Factor no Conserved 108088898
chr13 110521931 110522411 CTCF UCSC Txn Factor no Conserved 108088902
chr13 110521931 110522411 CTCF UCSC Txn Factor no Conserved 108088903
chr13 110522073 110522341 RAD21 UCSC Txn Factor no Conserved 108088917
chr13 110521813 110521826 ZBED1 JASPAR yes 19341128
chr13 110521813 110521826 ZBED1 JASPAR yes 60302442
chr13 110521823 110521844 ZNF263 JASPAR yes 19341129
chr13 110521823 110521844 ZNF263 JASPAR yes 60302443
chr13 110521835 110521850 STAT1 JASPAR yes 19341130
chr13 110521835 110521850 STAT1 JASPAR yes 60302444
chr13 110521837 110521848 STAT1 JASPAR yes 19341131
chr13 110521837 110521848 STAT3 JASPAR yes 19341132
chr13 110521837 110521848 STAT1 JASPAR yes 60302445
chr13 110521837 110521848 STAT3 JASPAR yes 60302446
chr13 110521839 110521853 PLAG1 JASPAR yes 19341133
chr13 110521839 110521853 PLAG1 JASPAR yes 60302447
chr13 110521853 110521858 MYB TRANSFAC yes 19341134
chr13 110521853 110521858 MYB TRANSFAC yes 60302448
chr13 110521861 110521866 ETS2 TRANSFAC yes 19341135
chr13 110521861 110521866 ETS2 TRANSFAC yes 60302449
chr13 110521863 110521878 STAT1 JASPAR yes 19341136
chr13 110521863 110521878 STAT1 JASPAR yes 60302450
chr13 110521868 110521889 IRF1 JASPAR yes 19341137
chr13 110521868 110521889 IRF1 JASPAR yes 60302451
chr13 110521886 110521898 TEAD1 JASPAR yes 19341138
chr13 110521886 110521898 TEAD1 JASPAR yes 60302452
chr13 110521888 110521892 YY1 TRANSFAC yes 19341139
chr13 110521888 110521892 YY1 TRANSFAC yes 60302453
chr13 110521894 110521899 TFAP2A TRANSFAC yes 19341140
chr13 110521894 110521899 TFAP2A TRANSFAC yes 60302454
chr13 110521894 110521900 MZF1 JASPAR yes 19341141
chr13 110521894 110521900 MZF1 JASPAR yes 60302455
chr13 110521896 110521917 IRF1 JASPAR yes 19341142
chr13 110521896 110521917 IRF1 JASPAR yes 60302456
chr13 110521900 110521915 STAT2 JASPAR yes 19341143
chr13 110521900 110521915 STAT2 JASPAR yes 60302457
chr13 110521920 110521923 MYB TRANSFAC yes 19341144
chr13 110521920 110521923 MYB TRANSFAC yes 60302458
chr13 110521942 110521954 TAL1 JASPAR yes 19341145
chr13 110521942 110521954 TAL1 JASPAR yes 60302459
chr13 110521943 110521955 NHLH1 JASPAR yes 19341146
chr13 110521943 110521955 NHLH1 JASPAR yes 60302460
chr13 110521944 110521954 MSC JASPAR yes 19341147
chr13 110521944 110521954 MYF6 JASPAR yes 19341148
chr13 110521944 110521954 NHLH1 JASPAR yes 19341149
chr13 110521944 110521954 TFAP4 JASPAR yes 19341150
chr13 110521944 110521954 MSC JASPAR yes 60302461
chr13 110521944 110521954 MYF6 JASPAR yes 60302462
chr13 110521944 110521954 NHLH1 JASPAR yes 60302463
chr13 110521944 110521954 TFAP4 JASPAR yes 60302464
chr13 110521946 110521958 NHLH1 JASPAR yes 19341151
chr13 110521946 110521958 NHLH1 JASPAR yes 60302465
chr13 110521979 110521993 GLIS2 JASPAR yes 19341152
chr13 110521979 110521993 GLIS2 JASPAR yes 60302466
chr13 110522001 110522005 LFA1 TRANSFAC yes 19341153
chr13 110522001 110522005 LFA1 TRANSFAC yes 60302467
chr13 110522001 110522011 REL JASPAR yes 19341154
chr13 110522001 110522011 REL JASPAR yes 60302468
chr13 110522012 110522017 SP1 TRANSFAC yes 19341155
chr13 110522012 110522017 SP1 TRANSFAC yes 60302469
chr13 110522034 110522042 FOXC1 JASPAR yes 19341156
chr13 110522034 110522042 FOXC1 JASPAR yes 60302470
chr13 110522041 110522051 MAX JASPAR yes 19341157
chr13 110522041 110522051 MAX JASPAR yes 60302471
chr13 110522042 110522052 BHLHE40 JASPAR yes 19341158
chr13 110522042 110522052 BHLHE41 JASPAR yes 19341159
chr13 110522042 110522052 HEY1 JASPAR yes 19341160
chr13 110522042 110522052 HEY2 JASPAR yes 19341161
chr13 110522042 110522052 MAX JASPAR yes 19341162
chr13 110522042 110522052 MLXIPL JASPAR yes 19341163
chr13 110522042 110522052 MNT JASPAR yes 19341164
chr13 110522042 110522052 SREBF2 JASPAR yes 19341165
chr13 110522042 110522052 TFE3 JASPAR yes 19341166
chr13 110522042 110522052 TFEB JASPAR yes 19341167
chr13 110522042 110522052 TFEC JASPAR yes 19341168
chr13 110522042 110522052 BHLHE40 JASPAR yes 60302472
chr13 110522042 110522052 BHLHE41 JASPAR yes 60302473
chr13 110522042 110522052 HEY1 JASPAR yes 60302474
chr13 110522042 110522052 HEY2 JASPAR yes 60302475
chr13 110522042 110522052 MAX JASPAR yes 60302476
chr13 110522042 110522052 MLXIPL JASPAR yes 60302477
chr13 110522042 110522052 MNT JASPAR yes 60302478
chr13 110522042 110522052 SREBF2 JASPAR yes 60302479
chr13 110522042 110522052 TFE3 JASPAR yes 60302480
chr13 110522042 110522052 TFEB JASPAR yes 60302481
chr13 110522042 110522052 TFEC JASPAR yes 60302482
chr13 110522042 110522053 USF1 JASPAR yes 19341169
chr13 110522042 110522053 USF2 JASPAR yes 19341170
chr13 110522042 110522053 USF1 JASPAR yes 60302483
chr13 110522042 110522053 USF2 JASPAR yes 60302484
chr13 110522043 110522053 MAX JASPAR yes 19341171
chr13 110522043 110522053 MAX JASPAR yes 60302485
chr13 110522044 110522049 MYC TRANSFAC yes 19341172
chr13 110522044 110522049 USF1 TRANSFAC yes 19341173
chr13 110522044 110522049 USF2 TRANSFAC yes 19341174
chr13 110522044 110522049 MYC TRANSFAC yes 60302486
chr13 110522044 110522049 USF1 TRANSFAC yes 60302487
chr13 110522044 110522049 USF2 TRANSFAC yes 60302488
chr13 110522057 110522071 STAT1 JASPAR yes 19341175
chr13 110522057 110522071 STAT1 JASPAR yes 60302489
chr13 110522057 110522072 PRDM1 JASPAR yes 19341176
chr13 110522057 110522072 STAT2 JASPAR yes 19341177
chr13 110522057 110522072 PRDM1 JASPAR yes 60302490
chr13 110522057 110522072 STAT2 JASPAR yes 60302491
chr13 110522087 110522098 GCM1 JASPAR yes 19341178
chr13 110522087 110522098 GCM1 JASPAR yes 60302492
chr13 110522101 110522120 PAX5 JASPAR yes 19341179
chr13 110522101 110522120 PAX5 JASPAR yes 60302493
chr13 110522103 110522117 TLX1 JASPAR yes 19341180
chr13 110522103 110522117 TLX1 JASPAR yes 60302494
chr13 110522104 110522121 PAX9 JASPAR yes 19341181
chr13 110522104 110522121 PAX9 JASPAR yes 60302495
chr13 110522174 110522193 CTCF JASPAR yes 19341182
chr13 110522174 110522193 CTCF JASPAR yes 60302496
chr13 110522178 110522188 MSC JASPAR yes 19341183
chr13 110522178 110522188 MSC JASPAR yes 60302497
chr13 110522198 110522203 SP1 TRANSFAC yes 19341184
chr13 110522198 110522203 SP1 TRANSFAC yes 60302498
chr13 110522230 110522249 CTCF JASPAR yes 19341185
chr13 110522230 110522249 CTCF JASPAR yes 60302499
chr13 110522241 110522245 LFA1 TRANSFAC yes 19341186
chr13 110522241 110522245 LFA1 TRANSFAC yes 60302500
SNP sites on vista17015[chr13:110521819-110522258]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr13 110521900 rs556420674 A G
IRF1 MZF1 STAT2
3388753
chr13 110521909 rs34712606 A AAT,AT
IRF1 STAT2
3388754
chr13 110521909 rs57345444 A AAT
IRF1 STAT2
3388755
chr13 110521962 rs116805358 G A
CTCF USF1
3388756
chr13 110522069 rs78366942 G A,C
CTCF PRDM1 STAT1 STAT2 USF1
3388757
chr13 110522152 rs336257 C A,G
CTCF RAD21 USF1
3388758
Genes possibly regulated by vista17015[chr13:110521819-110522258]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr13 110406184 110438915 - IRS2 ENSG00000185950.7 110438915 0.77 1.0 13018 17096
Expression level of Genes
Back to top
miRNAs possibly regulated by vista17015[chr13:110521819-110522258]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results