EnhancerDB
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  3. vista17036[chr13:110956468-110956902]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista17036[chr13:110956468-110956902]
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Tissue distribution of vista17036
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Transcription factor that possibly regulate vista17036[chr13:110956468-110956902]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr13 110956465 110956479 RXRB JASPAR yes 19342368
chr13 110956465 110956479 RXRB JASPAR yes 60335834
chr13 110956482 110956486 H1TF2 TRANSFAC yes 19342369
chr13 110956482 110956486 NFE TRANSFAC yes 19342370
chr13 110956482 110956486 SRF TRANSFAC yes 19342371
chr13 110956482 110956486 H1TF2 TRANSFAC yes 60335835
chr13 110956482 110956486 NFE TRANSFAC yes 60335836
chr13 110956482 110956486 SRF TRANSFAC yes 60335837
chr13 110956491 110956503 MEF2A JASPAR yes 19342372
chr13 110956491 110956503 MEF2B JASPAR yes 19342373
chr13 110956491 110956503 MEF2D JASPAR yes 19342374
chr13 110956491 110956503 MEF2A JASPAR yes 60335838
chr13 110956491 110956503 MEF2B JASPAR yes 60335839
chr13 110956491 110956503 MEF2D JASPAR yes 60335840
chr13 110956492 110956502 MEF2A JASPAR yes 19342375
chr13 110956492 110956502 MEF2A JASPAR yes 60335841
chr13 110956499 110956503 TEAD2 TRANSFAC yes 19342376
chr13 110956499 110956503 TEAD2 TRANSFAC yes 60335842
chr13 110956499 110956504 TBP TRANSFAC yes 19342377
chr13 110956499 110956504 TBP TRANSFAC yes 60335843
chr13 110956516 110956520 TEAD2 TRANSFAC yes 19342378
chr13 110956516 110956520 TEAD2 TRANSFAC yes 60335844
chr13 110956519 110956524 ETS2 TRANSFAC yes 19342379
chr13 110956519 110956524 ETS2 TRANSFAC yes 60335845
chr13 110956533 110956537 H1TF2 TRANSFAC yes 19342380
chr13 110956533 110956537 NFE TRANSFAC yes 19342381
chr13 110956533 110956537 SRF TRANSFAC yes 19342382
chr13 110956533 110956537 H1TF2 TRANSFAC yes 60335846
chr13 110956533 110956537 NFE TRANSFAC yes 60335847
chr13 110956533 110956537 SRF TRANSFAC yes 60335848
chr13 110956573 110956587 JUN JASPAR yes 19342383
chr13 110956573 110956587 JUN JASPAR yes 60335849
chr13 110956611 110956615 YY1 TRANSFAC yes 19342384
chr13 110956628 110956632 H4TF2 TRANSFAC yes 19342385
chr13 110956632 110956648 SRF JASPAR yes 19342386
chr13 110956633 110956640 NKX3-1 JASPAR yes 19342387
chr13 110956666 110956680 RORA JASPAR yes 19342388
chr13 110956668 110956688 ESR1 JASPAR yes 19342389
chr13 110956669 110956679 RORA JASPAR yes 19342390
chr13 110956670 110956681 ESRRB JASPAR yes 19342391
chr13 110956671 110956689 ESR2 JASPAR yes 19342392
chr13 110956671 110956691 PPARG JASPAR yes 19342393
chr13 110956673 110956688 ESR2 JASPAR yes 19342394
chr13 110956674 110956678 ESR1 TRANSFAC yes 19342395
chr13 110956690 110956704 JUN JASPAR yes 19342396
chr13 110956693 110956704 FOSL2 JASPAR yes 19342397
chr13 110956693 110956704 JUNB JASPAR yes 19342398
chr13 110956694 110956705 FOSL1 JASPAR yes 19342399
chr13 110956694 110956705 JUND JASPAR yes 19342400
chr13 110956695 110956702 JUN TRANSFAC yes 19342401
chr13 110956703 110956722 CTCF JASPAR yes 19342402
chr13 110956704 110956708 ESR1 TRANSFAC yes 19342403
chr13 110956745 110956755 MZF1 JASPAR yes 19342404
chr13 110956745 110956760 HNF4G JASPAR yes 19342405
chr13 110956745 110956760 NR2C2 JASPAR yes 19342406
chr13 110956746 110956760 RXRB JASPAR yes 19342407
chr13 110956746 110956760 RXRG JASPAR yes 19342408
chr13 110956749 110956760 NFKB1 JASPAR yes 19342409
chr13 110956765 110956773 OTX2 JASPAR yes 19342410
chr13 110956802 110956817 HSF1 JASPAR yes 19342411
chr13 110956817 110956828 TBX2 JASPAR yes 19342412
chr13 110956817 110956830 EOMES JASPAR yes 19342413
chr13 110956818 110956828 TBR1 JASPAR yes 19342414
chr13 110956834 110956845 FLI1 JASPAR yes 19342415
chr13 110956835 110956843 EHF JASPAR yes 19342416
chr13 110956850 110956855 SP1 TRANSFAC yes 19342417
chr13 110956865 110956876 FOSL2 JASPAR yes 19342418
chr13 110956865 110956876 JUNB JASPAR yes 19342419
chr13 110956866 110956877 FOSL1 JASPAR yes 19342420
chr13 110956867 110956874 JUN TRANSFAC yes 19342421
SNP sites on vista17036[chr13:110956468-110956902]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr13 110956523 rs77748762 G C
ETS2
3392788
chr13 110956559 rs76065270 C T no 3392789
chr13 110956655 rs116678734 C T no 3392790
chr13 110956704 rs7994799 T C
CTCF ESR1 FOSL1 FOSL2 JUN JUNB JUND
3392791
chr13 110956879 rs564634343 T C no 3392792
Genes possibly regulated by vista17036[chr13:110956468-110956902]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr13 110801318 110959496 - COL4A1 ENSG00000187498.10 110959496 0.85 0.93 13019 97406
chr13 110958159 111165374 + COL4A2 ENSG00000134871.13 110958159 0.78 0.91 13020 98743
Expression level of Genes
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miRNAs possibly regulated by vista17036[chr13:110956468-110956902]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results