EnhancerDB
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  3. vista17038[chr13:110969695-110970088]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista17038[chr13:110969695-110970088]
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Tissue distribution of vista17038
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Transcription factor that possibly regulate vista17038[chr13:110969695-110970088]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr13 110969680 110969695 RUNX2 JASPAR yes 19342435
chr13 110969680 110969695 RUNX2 JASPAR yes 60336527
chr13 110969681 110969701 RREB1 JASPAR yes 19342436
chr13 110969681 110969701 RREB1 JASPAR yes 60336528
chr13 110969683 110969703 RREB1 JASPAR yes 19342437
chr13 110969683 110969703 RREB1 JASPAR yes 60336529
chr13 110969698 110969704 HiNF-A TRANSFAC yes 19342438
chr13 110969698 110969704 HiNF-A TRANSFAC yes 60336530
chr13 110969698 110969708 MAX JASPAR yes 19342439
chr13 110969698 110969708 MAX JASPAR yes 60336531
chr13 110969699 110969709 CLOCK JASPAR yes 19342440
chr13 110969699 110969709 CLOCK JASPAR yes 60336532
chr13 110969710 110969730 RREB1 JASPAR yes 19342441
chr13 110969710 110969730 RREB1 JASPAR yes 60336533
chr13 110969711 110969725 FOXF2 JASPAR yes 19342442
chr13 110969711 110969725 FOXF2 JASPAR yes 60336534
chr13 110969711 110969726 FOXP1 JASPAR yes 19342443
chr13 110969711 110969726 FOXP1 JASPAR yes 60336535
chr13 110969714 110969726 FOXI1 JASPAR yes 19342444
chr13 110969714 110969726 FOXI1 JASPAR yes 60336536
chr13 110969716 110969724 FOXG1 JASPAR yes 19342445
chr13 110969716 110969724 FOXG1 JASPAR yes 60336537
chr13 110969718 110969724 HiNF-A TRANSFAC yes 19342446
chr13 110969718 110969724 HiNF-A TRANSFAC yes 60336538
chr13 110969720 110969740 TP53 JASPAR yes 19342447
chr13 110969720 110969740 TP53 JASPAR yes 60336539
chr13 110969722 110969742 TP63 JASPAR yes 19342448
chr13 110969722 110969742 TP63 JASPAR yes 60336540
chr13 110969723 110969741 TP53 JASPAR yes 19342449
chr13 110969723 110969741 TP53 JASPAR yes 60336541
chr13 110969724 110969739 TP53 JASPAR yes 19342450
chr13 110969724 110969739 TP53 JASPAR yes 60336542
chr13 110969789 110969810 ZNF263 JASPAR yes 19342451
chr13 110969789 110969810 ZNF263 JASPAR yes 60336543
chr13 110969816 110969831 TFAP2A JASPAR yes 19342452
chr13 110969816 110969831 TFAP2A JASPAR yes 60336544
chr13 110969819 110969831 TFAP2A JASPAR yes 19342453
chr13 110969819 110969831 TFAP2B JASPAR yes 19342454
chr13 110969819 110969831 TFAP2C JASPAR yes 19342455
chr13 110969819 110969831 TFAP2A JASPAR yes 60336545
chr13 110969819 110969831 TFAP2B JASPAR yes 60336546
chr13 110969819 110969831 TFAP2C JASPAR yes 60336547
chr13 110969821 110969832 EBF1 JASPAR yes 19342456
chr13 110969821 110969832 EBF1 JASPAR yes 60336548
chr13 110969825 110969830 TFAP2A TRANSFAC yes 19342457
chr13 110969825 110969830 TFAP2A TRANSFAC yes 60336549
chr13 110969825 110969831 MZF1 JASPAR yes 19342458
chr13 110969825 110969831 MZF1 JASPAR yes 60336550
chr13 110969838 110969853 SCRT1 JASPAR yes 19342459
chr13 110969838 110969853 SCRT1 JASPAR yes 60336551
chr13 110969839 110969851 GRHL1 JASPAR yes 19342460
chr13 110969839 110969851 GRHL1 JASPAR yes 60336552
chr13 110969842 110969848 PTF TRANSFAC yes 19342461
chr13 110969842 110969848 PTF TRANSFAC yes 60336553
chr13 110969856 110969860 H4TF2 TRANSFAC yes 19342462
chr13 110969856 110969860 H4TF2 TRANSFAC yes 60336554
chr13 110969882 110969893 E2F1 JASPAR yes 19342463
chr13 110969882 110969893 E2F1 JASPAR yes 60336555
chr13 110969883 110969888 SP1 TRANSFAC yes 19342464
chr13 110969883 110969888 SP1 TRANSFAC yes 60336556
chr13 110969883 110969894 E2F4 JASPAR yes 19342465
chr13 110969883 110969894 E2F6 JASPAR yes 19342466
chr13 110969883 110969894 E2F4 JASPAR yes 60336557
chr13 110969883 110969894 E2F6 JASPAR yes 60336558
chr13 110969884 110969889 SP1 TRANSFAC yes 19342467
chr13 110969884 110969889 SP1 TRANSFAC yes 60336559
chr13 110969887 110969893 MAZ TRANSFAC yes 19342468
chr13 110969887 110969893 MAZ TRANSFAC yes 60336560
chr13 110969899 110969917 RARA JASPAR yes 19342469
chr13 110969899 110969917 RARA JASPAR yes 60336561
chr13 110969910 110969924 NR2F1 JASPAR yes 19342470
chr13 110969910 110969924 NR2F1 JASPAR yes 60336562
chr13 110969986 110970004 RARA JASPAR yes 19342471
chr13 110969986 110970004 RARA JASPAR yes 60336563
chr13 110969988 110969992 LFA1 TRANSFAC yes 19342472
chr13 110969988 110969992 LFA1 TRANSFAC yes 60336564
chr13 110969993 110970011 ESR2 JASPAR yes 19342473
chr13 110969993 110970011 ESR2 JASPAR yes 60336565
chr13 110969995 110970010 ESR2 JASPAR yes 19342474
chr13 110969995 110970010 ESR2 JASPAR yes 60336566
chr13 110970005 110970010 USF2 TRANSFAC yes 19342475
chr13 110970005 110970010 USF2 TRANSFAC yes 60336567
chr13 110970033 110970045 ZBTB7B JASPAR yes 19342476
chr13 110970033 110970045 ZBTB7C JASPAR yes 19342477
chr13 110970033 110970045 ZBTB7B JASPAR yes 60336568
chr13 110970033 110970045 ZBTB7C JASPAR yes 60336569
chr13 110970087 110970108 MAFG JASPAR yes 19342478
chr13 110970087 110970108 MAFG JASPAR yes 60336570
SNP sites on vista17038[chr13:110969695-110970088]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr13 110969704 rs34125710 CAT C
CLOCK HiNF-A MAX
3392954
chr13 110969760 rs7334395 C T no 3392955
chr13 110969768 rs7334722 G A no 3392956
chr13 110969785 rs4773154 T C no 3392957
chr13 110969792 rs7334237 A G
ZNF263
3392958
chr13 110969802 rs9559767 G A
ZNF263
3392959
chr13 110969831 rs141272252 A G
EBF1 MZF1 TFAP2A TFAP2B TFAP2C
3392960
chr13 110969892 rs74783411 G A
E2F1 E2F4 E2F6 MAZ
3392961
chr13 110969903 rs113880865 TA T
RARA
3392962
chr13 110969924 rs7335117 G A
NR2F1
3392963
chr13 110969932 rs192779660 T A no 3392964
chr13 110969961 rs145135520 A C no 3392965
chr13 110970002 rs112732352 A G
ESR2 RARA
3392966
chr13 110970024 rs7336422 T A no 3392967
chr13 110970047 rs559833844 G A no 3392968
Genes possibly regulated by vista17038[chr13:110969695-110970088]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr13 110801318 110959496 - COL4A1 ENSG00000187498.10 110959496 0.85 0.93 13019 89801
chr13 110958159 111165374 + COL4A2 ENSG00000134871.13 110958159 0.78 0.91 13020 88464
Expression level of Genes
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miRNAs possibly regulated by vista17038[chr13:110969695-110970088]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results