EnhancerDB
  1. Home
  2. Enhancers
  3. vista17040[chr13:110982194-110982608]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista17040[chr13:110982194-110982608]
Back to top
Tissue distribution of vista17040
Back to top
Transcription factor that possibly regulate vista17040[chr13:110982194-110982608]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr13 110982193 110982198 SP1 TRANSFAC yes 19342519
chr13 110982193 110982198 SP1 TRANSFAC yes 60338014
chr13 110982197 110982218 MAFG JASPAR yes 19342520
chr13 110982197 110982218 MAFG JASPAR yes 60338015
chr13 110982201 110982212 FOSL2 JASPAR yes 19342521
chr13 110982201 110982212 FOSL2 JASPAR yes 60338016
chr13 110982202 110982208 YY1 JASPAR yes 19342522
chr13 110982202 110982208 YY1 JASPAR yes 60338017
chr13 110982202 110982220 MAFF JASPAR yes 19342523
chr13 110982202 110982220 MAFF JASPAR yes 60338018
chr13 110982203 110982218 MAFK JASPAR yes 19342524
chr13 110982203 110982218 MAFK JASPAR yes 60338019
chr13 110982238 110982252 PLAG1 JASPAR yes 19342525
chr13 110982238 110982252 PLAG1 JASPAR yes 60338020
chr13 110982238 110982253 NR2C2 JASPAR yes 19342526
chr13 110982238 110982253 NR2C2 JASPAR yes 60338021
chr13 110982239 110982253 RXRB JASPAR yes 19342527
chr13 110982239 110982253 RXRG JASPAR yes 19342528
chr13 110982239 110982253 RXRB JASPAR yes 60338022
chr13 110982239 110982253 RXRG JASPAR yes 60338023
chr13 110982240 110982260 RREB1 JASPAR yes 19342529
chr13 110982240 110982260 RREB1 JASPAR yes 60338024
chr13 110982277 110982291 XBP1 JASPAR yes 19342530
chr13 110982277 110982291 XBP1 JASPAR yes 60338025
chr13 110982318 110982326 MGA JASPAR yes 19342531
chr13 110982318 110982326 TBX15 JASPAR yes 19342532
chr13 110982318 110982326 TBX1 JASPAR yes 19342533
chr13 110982318 110982326 TBX4 JASPAR yes 19342534
chr13 110982318 110982326 TBX5 JASPAR yes 19342535
chr13 110982318 110982326 MGA JASPAR yes 60338026
chr13 110982318 110982326 TBX15 JASPAR yes 60338027
chr13 110982318 110982326 TBX1 JASPAR yes 60338028
chr13 110982318 110982326 TBX4 JASPAR yes 60338029
chr13 110982318 110982326 TBX5 JASPAR yes 60338030
chr13 110982318 110982328 TBR1 JASPAR yes 19342536
chr13 110982318 110982328 TBR1 JASPAR yes 60338031
chr13 110982349 110982358 NFIX JASPAR yes 19342537
chr13 110982349 110982358 NFIX JASPAR yes 60338032
chr13 110982349 110982359 NFIA JASPAR yes 19342538
chr13 110982349 110982359 NFIA JASPAR yes 60338033
chr13 110982351 110982357 NFIC JASPAR yes 19342539
chr13 110982351 110982357 NFIC JASPAR yes 60338034
chr13 110982367 110982378 FOXH1 JASPAR yes 19342540
chr13 110982367 110982378 FOXH1 JASPAR yes 60338035
chr13 110982371 110982375 YY1 TRANSFAC yes 19342541
chr13 110982371 110982375 YY1 TRANSFAC yes 60338036
chr13 110982387 110982400 POU2F2 JASPAR yes 19342542
chr13 110982387 110982400 POU2F2 JASPAR yes 60338037
chr13 110982435 110982446 PHOX2A JASPAR yes 19342543
chr13 110982435 110982446 PROP1 JASPAR yes 19342544
chr13 110982435 110982446 PHOX2A JASPAR yes 60338038
chr13 110982435 110982446 PROP1 JASPAR yes 60338039
chr13 110982465 110982469 YY1 TRANSFAC yes 19342545
chr13 110982465 110982469 YY1 TRANSFAC yes 60338040
chr13 110982497 110982500 MYB TRANSFAC yes 19342546
chr13 110982497 110982500 MYB TRANSFAC yes 60338041
chr13 110982506 110982521 HNF4A JASPAR yes 19342547
chr13 110982506 110982521 HNF4A JASPAR yes 60338042
chr13 110982507 110982521 NR2F1 JASPAR yes 19342548
chr13 110982507 110982521 NR2F1 JASPAR yes 60338043
chr13 110982507 110982522 HNF4G JASPAR yes 19342549
chr13 110982507 110982522 HNF4G JASPAR yes 60338044
chr13 110982517 110982523 TCF4 TRANSFAC yes 19342550
chr13 110982517 110982523 TCF4 TRANSFAC yes 60338045
chr13 110982545 110982559 ATF7 JASPAR yes 19342551
chr13 110982545 110982559 BATF3 JASPAR yes 19342552
chr13 110982545 110982559 ATF7 JASPAR yes 60338046
chr13 110982545 110982559 BATF3 JASPAR yes 60338047
chr13 110982546 110982558 JDP2 JASPAR yes 19342553
chr13 110982546 110982558 JDP2 JASPAR yes 60338048
chr13 110982548 110982565 BCL6B JASPAR yes 19342554
chr13 110982548 110982565 BCL6B JASPAR yes 60338049
chr13 110982574 110982579 ETS2 TRANSFAC yes 19342555
chr13 110982574 110982579 ETS2 TRANSFAC yes 60338050
chr13 110982574 110982584 TEAD4 JASPAR yes 19342556
chr13 110982574 110982584 TEAD4 JASPAR yes 60338051
chr13 110982579 110982593 IRF8 JASPAR yes 19342557
chr13 110982579 110982593 IRF8 JASPAR yes 60338052
chr13 110982590 110982594 TEAD2 TRANSFAC yes 19342558
chr13 110982590 110982594 TEAD2 TRANSFAC yes 60338053
chr13 110982592 110982595 MYB TRANSFAC yes 19342559
chr13 110982592 110982595 MYB TRANSFAC yes 60338054
chr13 110982596 110982600 ESR1 TRANSFAC yes 19342560
chr13 110982596 110982600 ESR1 TRANSFAC yes 60338055
SNP sites on vista17040[chr13:110982194-110982608]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr13 110982195 rs141765488 C T
SP1
3393143
chr13 110982283 rs117732883 C T
XBP1
3393144
chr13 110982357 rs7989565 A G
NFIA NFIC NFIX
3393145
chr13 110982401 rs566760030 T A no 3393146
chr13 110982405 rs61964293 C T no 3393147
chr13 110982406 rs192965533 T A no 3393148
chr13 110982419 rs4447275 G A no 3393149
chr13 110982485 rs138128730 T C no 3393150
chr13 110982512 rs375907134 C T
HNF4A HNF4G NR2F1
3393151
chr13 110982585 rs371160383 C T
IRF8
3393152
chr13 110982597 rs573100802 G A
ESR1
3393153
Genes possibly regulated by vista17040[chr13:110982194-110982608]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr13 110801318 110959496 - COL4A1 ENSG00000187498.10 110959496 0.85 0.93 13019 77302
chr13 110958159 111165374 + COL4A2 ENSG00000134871.13 110958159 0.78 0.91 13020 75965
Expression level of Genes
Back to top
miRNAs possibly regulated by vista17040[chr13:110982194-110982608]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results