EnhancerDB
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  3. vista17042[chr13:110995670-110995825]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista17042[chr13:110995670-110995825]
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Tissue distribution of vista17042
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Transcription factor that possibly regulate vista17042[chr13:110995670-110995825]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr13 110995714 110995725 STAT3 JASPAR yes 19342615
chr13 110995714 110995725 STAT3 JASPAR yes 60339786
chr13 110995745 110995762 RXRA JASPAR yes 19342616
chr13 110995745 110995762 RXRA JASPAR yes 60339787
chr13 110995782 110995787 ETS2 TRANSFAC yes 19342617
chr13 110995782 110995787 ETS2 TRANSFAC yes 60339788
chr13 110995806 110995818 PKNOX1 JASPAR yes 19342618
chr13 110995806 110995818 TGIF1 JASPAR yes 19342619
chr13 110995806 110995818 TGIF2 JASPAR yes 19342620
chr13 110995806 110995818 PKNOX1 JASPAR yes 60339789
chr13 110995806 110995818 TGIF1 JASPAR yes 60339790
chr13 110995806 110995818 TGIF2 JASPAR yes 60339791
chr13 110995807 110995826 PAX5 JASPAR yes 19342621
chr13 110995807 110995826 PAX5 JASPAR yes 60339792
chr13 110995820 110995831 FOSL1 JASPAR yes 19342622
chr13 110995820 110995831 FOSL1 JASPAR yes 60339793
chr13 110995822 110995833 DUX4 JASPAR yes 19342623
chr13 110995822 110995833 DUX4 JASPAR yes 60339794
SNP sites on vista17042[chr13:110995670-110995825]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr13 110995739 rs10450819 G A no 3393354
chr13 110995767 rs9559773 C T no 3393355
chr13 110995821 rs148317448 C T
FOSL1 PAX5
3393356
Genes possibly regulated by vista17042[chr13:110995670-110995825]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr13 110801318 110959496 - COL4A1 ENSG00000187498.10 110959496 0.85 0.93 13019 63826
chr13 110958159 111165374 + COL4A2 ENSG00000134871.13 110958159 0.78 0.91 13020 62489
Expression level of Genes
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miRNAs possibly regulated by vista17042[chr13:110995670-110995825]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results