EnhancerDB
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  3. vista17043[chr13:111013776-111014136]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista17043[chr13:111013776-111014136]
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Tissue distribution of vista17043
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Transcription factor that possibly regulate vista17043[chr13:111013776-111014136]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr13 111013782 111013785 MYB TRANSFAC yes 19342624
chr13 111013782 111013785 MYB TRANSFAC yes 60342098
chr13 111013784 111013804 TP53 JASPAR yes 19342625
chr13 111013784 111013804 TP53 JASPAR yes 60342099
chr13 111013791 111013802 NFKB1 JASPAR yes 19342626
chr13 111013791 111013802 NFKB1 JASPAR yes 60342100
chr13 111013832 111013850 MAFF JASPAR yes 19342627
chr13 111013832 111013850 MAFF JASPAR yes 60342101
chr13 111013839 111013855 SRF JASPAR yes 19342628
chr13 111013839 111013855 SRF JASPAR yes 60342102
chr13 111013839 111013857 SRF JASPAR yes 19342629
chr13 111013839 111013857 SRF JASPAR yes 60342103
chr13 111013842 111013851 SRF TRANSFAC yes 19342630
chr13 111013842 111013851 SRF TRANSFAC yes 60342104
chr13 111013842 111013854 SRF JASPAR yes 19342631
chr13 111013842 111013854 SRF JASPAR yes 60342105
chr13 111013843 111013853 HOXA13 JASPAR yes 19342632
chr13 111013843 111013853 HOXB13 JASPAR yes 19342633
chr13 111013843 111013853 HOXD13 JASPAR yes 19342634
chr13 111013843 111013853 HOXA13 JASPAR yes 60342106
chr13 111013843 111013853 HOXB13 JASPAR yes 60342107
chr13 111013843 111013853 HOXD13 JASPAR yes 60342108
chr13 111013844 111013853 CDX1 JASPAR yes 19342635
chr13 111013844 111013853 CDX1 JASPAR yes 60342109
chr13 111013844 111013855 CDX2 JASPAR yes 19342636
chr13 111013844 111013855 CDX2 JASPAR yes 60342110
chr13 111013849 111013859 SP1 JASPAR yes 19342637
chr13 111013849 111013859 SP1 JASPAR yes 60342111
chr13 111013850 111013854 LFA1 TRANSFAC yes 19342638
chr13 111013850 111013854 LFA1 TRANSFAC yes 60342112
chr13 111013872 111013891 RFX2 JASPAR yes 19342639
chr13 111013872 111013891 RFX2 JASPAR yes 60342113
chr13 111013874 111013880 ATF1 TRANSFAC yes 19342640
chr13 111013874 111013880 ATF1 TRANSFAC yes 60342114
chr13 111013874 111013886 CREB1 JASPAR yes 19342641
chr13 111013874 111013886 CREB1 JASPAR yes 60342115
chr13 111013876 111013892 RFX2 JASPAR yes 19342642
chr13 111013876 111013892 RFX3 JASPAR yes 19342643
chr13 111013876 111013892 RFX4 JASPAR yes 19342644
chr13 111013876 111013892 RFX5 JASPAR yes 19342645
chr13 111013876 111013892 RFX2 JASPAR yes 60342116
chr13 111013876 111013892 RFX3 JASPAR yes 60342117
chr13 111013876 111013892 RFX4 JASPAR yes 60342118
chr13 111013876 111013892 RFX5 JASPAR yes 60342119
chr13 111013877 111013896 RFX2 JASPAR yes 19342646
chr13 111013877 111013896 RFX2 JASPAR yes 60342120
chr13 111013879 111013894 RFX5 JASPAR yes 19342647
chr13 111013879 111013894 RFX5 JASPAR yes 60342121
chr13 111013884 111013897 SMAD2 JASPAR yes 19342648
chr13 111013884 111013897 SMAD2 JASPAR yes 60342122
chr13 111013886 111013894 MEIS2 JASPAR yes 19342649
chr13 111013886 111013894 MEIS3 JASPAR yes 19342650
chr13 111013886 111013894 MEIS2 JASPAR yes 60342123
chr13 111013886 111013894 MEIS3 JASPAR yes 60342124
chr13 111013898 111013908 ERF JASPAR yes 19342651
chr13 111013898 111013908 ETV3 JASPAR yes 19342652
chr13 111013898 111013908 ETV5 JASPAR yes 19342653
chr13 111013898 111013908 ETV6 JASPAR yes 19342654
chr13 111013898 111013908 ERF JASPAR yes 60342125
chr13 111013898 111013908 ETV3 JASPAR yes 60342126
chr13 111013898 111013908 ETV5 JASPAR yes 60342127
chr13 111013898 111013908 ETV6 JASPAR yes 60342128
chr13 111013900 111013906 ETS1 JASPAR yes 19342655
chr13 111013900 111013906 SPI1 JASPAR yes 19342656
chr13 111013900 111013906 ETS1 JASPAR yes 60342129
chr13 111013900 111013906 SPI1 JASPAR yes 60342130
chr13 111013909 111013921 CREB1 JASPAR yes 19342657
chr13 111013909 111013921 CREB1 JASPAR yes 60342131
chr13 111013910 111013915 ATF1 TRANSFAC yes 19342658
chr13 111013910 111013915 ATF1 TRANSFAC yes 60342132
chr13 111013912 111013928 SOX8 JASPAR yes 19342659
chr13 111013912 111013928 SOX8 JASPAR yes 60342133
chr13 111013918 111013923 GATA2 JASPAR yes 19342660
chr13 111013918 111013923 GATA2 JASPAR yes 60342134
chr13 111013921 111013924 MYB TRANSFAC yes 19342661
chr13 111013921 111013924 MYB TRANSFAC yes 60342135
chr13 111013982 111013992 TFEB JASPAR yes 19342662
chr13 111013982 111013992 TFEC JASPAR yes 19342663
chr13 111013982 111013992 TFEB JASPAR yes 60342136
chr13 111013982 111013992 TFEC JASPAR yes 60342137
chr13 111013982 111013993 USF1 JASPAR yes 19342664
chr13 111013982 111013993 USF2 JASPAR yes 19342665
chr13 111013982 111013993 USF1 JASPAR yes 60342138
chr13 111013982 111013993 USF2 JASPAR yes 60342139
chr13 111014000 111014014 RORA JASPAR yes 19342666
chr13 111014000 111014014 RORA JASPAR yes 60342140
chr13 111014006 111014012 ESR1 TRANSFAC yes 19342667
chr13 111014006 111014012 ESR1 TRANSFAC yes 60342141
chr13 111014008 111014012 ESR1 TRANSFAC yes 19342668
chr13 111014008 111014012 ESR1 TRANSFAC yes 60342142
chr13 111014023 111014029 LEF1 TRANSFAC yes 19342669
chr13 111014023 111014029 SOX10 JASPAR yes 19342670
chr13 111014023 111014029 LEF1 TRANSFAC yes 60342143
chr13 111014023 111014029 SOX10 JASPAR yes 60342144
chr13 111014037 111014042 SP1 TRANSFAC yes 19342671
chr13 111014037 111014042 SP1 TRANSFAC yes 60342145
chr13 111014072 111014083 CEBPB JASPAR yes 19342672
chr13 111014072 111014083 CEBPB JASPAR yes 60342146
chr13 111014107 111014122 HSF1 JASPAR yes 19342673
chr13 111014107 111014122 HSF1 JASPAR yes 60342147
chr13 111014108 111014121 HSF1 JASPAR yes 19342674
chr13 111014108 111014121 HSF4 JASPAR yes 19342675
chr13 111014108 111014121 HSF1 JASPAR yes 60342148
chr13 111014108 111014121 HSF4 JASPAR yes 60342149
chr13 111014119 111014134 RUNX2 JASPAR yes 19342676
chr13 111014119 111014134 RUNX2 JASPAR yes 60342150
SNP sites on vista17043[chr13:111013776-111014136]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr13 111013824 rs11839958 C T no 3393638
chr13 111013875 rs140776505 T C
ATF1 CREB1 RFX2
3393639
chr13 111013902 rs565883532 G A
ERF ETS1 ETV3 ETV5 ETV6 SPI1
3393640
chr13 111013942 rs144822911 G A no 3393641
chr13 111013959 rs138659244 A G no 3393642
chr13 111013964 rs78065214 T G no 3393643
Genes possibly regulated by vista17043[chr13:111013776-111014136]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr13 110801318 110959496 - COL4A1 ENSG00000187498.10 110959496 0.85 0.93 13019 45720
chr13 110958159 111165374 + COL4A2 ENSG00000134871.13 110958159 0.78 0.91 13020 44383
Expression level of Genes
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miRNAs possibly regulated by vista17043[chr13:111013776-111014136]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results