EnhancerDB
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  3. vista17046[chr13:111039905-111040155]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista17046[chr13:111039905-111040155]
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Tissue distribution of vista17046
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Transcription factor that possibly regulate vista17046[chr13:111039905-111040155]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr13 111039919 111039924 SP1 TRANSFAC yes 19342791
chr13 111039919 111039924 SP1 TRANSFAC yes 60346251
chr13 111039931 111039936 TFAP2A TRANSFAC yes 19342792
chr13 111039931 111039936 TFAP2A TRANSFAC yes 60346252
chr13 111039931 111039937 MZF1 JASPAR yes 19342793
chr13 111039931 111039937 MZF1 JASPAR yes 60346253
chr13 111039934 111039940 PEA3 TRANSFAC yes 19342794
chr13 111039934 111039940 PEA3 TRANSFAC yes 60346254
chr13 111039944 111039949 SP1 TRANSFAC yes 19342795
chr13 111039944 111039949 SP1 TRANSFAC yes 60346255
chr13 111039954 111039966 TFAP2A JASPAR yes 19342796
chr13 111039954 111039966 TFAP2B JASPAR yes 19342797
chr13 111039954 111039966 TFAP2C JASPAR yes 19342798
chr13 111039954 111039966 TFAP2A JASPAR yes 60346256
chr13 111039954 111039966 TFAP2B JASPAR yes 60346257
chr13 111039954 111039966 TFAP2C JASPAR yes 60346258
chr13 111039954 111039968 EBF1 JASPAR yes 19342799
chr13 111039954 111039968 EBF1 JASPAR yes 60346259
chr13 111039954 111039969 TFAP2A JASPAR yes 19342800
chr13 111039954 111039969 TFAP2A JASPAR yes 60346260
chr13 111039965 111039981 SOX4 JASPAR yes 19342801
chr13 111039965 111039981 SOX4 JASPAR yes 60346261
chr13 111039976 111039991 STAT1 JASPAR yes 19342802
chr13 111039976 111039991 STAT1 JASPAR yes 60346262
chr13 111039978 111039989 STAT1 JASPAR yes 19342803
chr13 111039978 111039989 STAT1 JASPAR yes 60346263
chr13 111039978 111039993 MEF2C JASPAR yes 19342804
chr13 111039978 111039993 MEF2C JASPAR yes 60346264
chr13 111039979 111039994 MEF2A JASPAR yes 19342805
chr13 111039979 111039994 MEF2A JASPAR yes 60346265
chr13 111039980 111039992 MEF2B JASPAR yes 19342806
chr13 111039980 111039992 MEF2B JASPAR yes 60346266
chr13 111039992 111040003 ELK4 JASPAR yes 19342807
chr13 111039992 111040003 ELK4 JASPAR yes 60346267
chr13 111039992 111040005 ELF3 JASPAR yes 19342808
chr13 111039992 111040005 ELF3 JASPAR yes 60346268
chr13 111039993 111040003 GABPA JASPAR yes 19342809
chr13 111039993 111040003 GABPA JASPAR yes 60346269
chr13 111039993 111040005 EHF JASPAR yes 19342810
chr13 111039993 111040005 ELF1 JASPAR yes 19342811
chr13 111039993 111040005 ELF4 JASPAR yes 19342812
chr13 111039993 111040005 EHF JASPAR yes 60346270
chr13 111039993 111040005 ELF1 JASPAR yes 60346271
chr13 111039993 111040005 ELF4 JASPAR yes 60346272
chr13 111039993 111040006 ELF1 JASPAR yes 19342813
chr13 111039993 111040006 ELF1 JASPAR yes 60346273
chr13 111039994 111040003 ELK4 JASPAR yes 19342814
chr13 111039994 111040003 ELK4 JASPAR yes 60346274
chr13 111039995 111040001 ETS1 JASPAR yes 19342815
chr13 111039995 111040001 SPI1 JASPAR yes 19342816
chr13 111039995 111040001 ETS1 JASPAR yes 60346275
chr13 111039995 111040001 SPI1 JASPAR yes 60346276
chr13 111040060 111040065 SP1 TRANSFAC yes 19342817
chr13 111040060 111040065 SP1 TRANSFAC yes 60346277
chr13 111040080 111040095 JUND JASPAR yes 19342818
chr13 111040080 111040095 JUND JASPAR yes 60346278
chr13 111040083 111040095 JDP2 JASPAR yes 19342819
chr13 111040083 111040095 JDP2 JASPAR yes 60346279
chr13 111040083 111040098 JUND JASPAR yes 19342820
chr13 111040083 111040098 JUND JASPAR yes 60346280
chr13 111040084 111040097 JUN JASPAR yes 19342821
chr13 111040084 111040097 JUN JASPAR yes 60346281
chr13 111040085 111040092 JUN TRANSFAC yes 19342822
chr13 111040085 111040092 JUN TRANSFAC yes 60346282
chr13 111040093 111040107 STAT1 JASPAR yes 19342823
chr13 111040093 111040107 STAT1 JASPAR yes 60346283
chr13 111040094 111040108 SPIC JASPAR yes 19342824
chr13 111040094 111040108 SPIC JASPAR yes 60346284
chr13 111040097 111040104 SPIB JASPAR yes 19342825
chr13 111040097 111040104 SPIB JASPAR yes 60346285
chr13 111040121 111040142 ZNF263 JASPAR yes 19342826
chr13 111040121 111040142 ZNF263 JASPAR yes 60346286
chr13 111040123 111040128 ETS2 TRANSFAC yes 19342827
chr13 111040123 111040128 ETS2 TRANSFAC yes 60346287
chr13 111040124 111040145 ZNF263 JASPAR yes 19342828
chr13 111040124 111040145 ZNF263 JASPAR yes 60346288
chr13 111040126 111040141 TFAP2C JASPAR yes 19342829
chr13 111040126 111040141 TFAP2C JASPAR yes 60346289
chr13 111040130 111040136 MZF1 JASPAR yes 19342830
chr13 111040130 111040136 MZF1 JASPAR yes 60346290
chr13 111040138 111040144 SP1 TRANSFAC yes 19342831
chr13 111040138 111040144 SP1 TRANSFAC yes 60346291
chr13 111040139 111040150 E2F4 JASPAR yes 19342832
chr13 111040139 111040150 E2F6 JASPAR yes 19342833
chr13 111040139 111040150 E2F4 JASPAR yes 60346292
chr13 111040139 111040150 E2F6 JASPAR yes 60346293
chr13 111040140 111040151 E2F1 JASPAR yes 19342834
chr13 111040140 111040151 E2F1 JASPAR yes 60346294
chr13 111040140 111040159 REST JASPAR yes 19342835
chr13 111040140 111040159 REST JASPAR yes 60346295
chr13 111040144 111040149 SP1 TRANSFAC yes 19342836
chr13 111040144 111040149 SP1 TRANSFAC yes 60346296
chr13 111040146 111040158 NHLH1 JASPAR yes 19342837
chr13 111040146 111040158 NHLH1 JASPAR yes 60346297
chr13 111040147 111040157 NHLH1 JASPAR yes 19342838
chr13 111040147 111040157 NHLH1 JASPAR yes 60346298
chr13 111040155 111040167 NHLH1 JASPAR yes 19342839
chr13 111040155 111040167 NHLH1 JASPAR yes 60346299
SNP sites on vista17046[chr13:111039905-111040155]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr13 111039923 rs552003380 G GC
SP1
3394041
chr13 111039928 rs140317319 G A,T no 3394042
chr13 111039949 rs1999013 G A
SP1
3394043
chr13 111040015 rs74127433 G T no 3394044
chr13 111040026 rs74127434 A G,T no 3394045
chr13 111040095 rs112436564 G A
JDP2 JUN JUND SPIC STAT1
3394046
chr13 111040103 rs113696651 C T
SPIB SPIC STAT1
3394047
chr13 111040109 rs376125057 A G no 3394048
Genes possibly regulated by vista17046[chr13:111039905-111040155]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr13 110801318 110959496 - COL4A1 ENSG00000187498.10 110959496 0.85 0.93 13019 19591
chr13 110958159 111165374 + COL4A2 ENSG00000134871.13 110958159 0.78 0.91 13020 18254
Expression level of Genes
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miRNAs possibly regulated by vista17046[chr13:111039905-111040155]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results