EnhancerDB
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  3. vista17050[chr13:111049993-111050394]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista17050[chr13:111049993-111050394]
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Tissue distribution of vista17050
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Transcription factor that possibly regulate vista17050[chr13:111049993-111050394]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr13 111049778 111050002 CEBPB UCSC Txn Factor no Conserved 108089340
chr13 111050005 111050017 GLI2 JASPAR yes 19342949
chr13 111050005 111050017 GLI2 JASPAR yes 60347632
chr13 111050049 111050055 ZNF354C JASPAR yes 19342950
chr13 111050049 111050055 ZNF354C JASPAR yes 60347633
chr13 111050063 111050069 SOX10 JASPAR yes 19342951
chr13 111050063 111050069 SOX10 JASPAR yes 60347634
chr13 111050066 111050075 THAP1 JASPAR yes 19342952
chr13 111050066 111050075 THAP1 JASPAR yes 60347635
chr13 111050068 111050089 ZNF263 JASPAR yes 19342953
chr13 111050068 111050089 ZNF263 JASPAR yes 60347636
chr13 111050069 111050073 LFA1 TRANSFAC yes 19342954
chr13 111050069 111050073 LFA1 TRANSFAC yes 60347637
chr13 111050071 111050082 FLI1 JASPAR yes 19342955
chr13 111050071 111050082 FLI1 JASPAR yes 60347638
chr13 111050072 111050080 EHF JASPAR yes 19342956
chr13 111050072 111050080 EHF JASPAR yes 60347639
chr13 111050075 111050096 ZNF263 JASPAR yes 19342957
chr13 111050075 111050096 ZNF263 JASPAR yes 60347640
chr13 111050090 111050095 SP1 TRANSFAC yes 19342958
chr13 111050090 111050095 SP1 TRANSFAC yes 60347641
chr13 111050098 111050107 THAP1 JASPAR yes 19342959
chr13 111050098 111050107 THAP1 JASPAR yes 60347642
chr13 111050101 111050105 LFA1 TRANSFAC yes 19342960
chr13 111050101 111050105 LFA1 TRANSFAC yes 60347643
chr13 111050119 111050139 RREB1 JASPAR yes 19342961
chr13 111050119 111050139 RREB1 JASPAR yes 60347644
chr13 111050125 111050137 INSM1 JASPAR yes 19342962
chr13 111050125 111050137 INSM1 JASPAR yes 60347645
chr13 111050167 111050177 OLIG1 JASPAR yes 19342963
chr13 111050167 111050177 OLIG2 JASPAR yes 19342964
chr13 111050167 111050177 OLIG3 JASPAR yes 19342965
chr13 111050167 111050177 OLIG1 JASPAR yes 60347646
chr13 111050167 111050177 OLIG2 JASPAR yes 60347647
chr13 111050167 111050177 OLIG3 JASPAR yes 60347648
chr13 111050169 111050185 POU4F2 JASPAR yes 19342966
chr13 111050169 111050185 POU4F2 JASPAR yes 60347649
chr13 111050171 111050175 YY1 TRANSFAC yes 19342967
chr13 111050171 111050175 YY1 TRANSFAC yes 60347650
chr13 111050171 111050185 POU4F1 JASPAR yes 19342968
chr13 111050171 111050185 POU4F1 JASPAR yes 60347651
chr13 111050186 111050201 MEF2A JASPAR yes 19342969
chr13 111050186 111050201 MEF2A JASPAR yes 60347652
chr13 111050187 111050199 FOXI1 JASPAR yes 19342970
chr13 111050187 111050199 FOXI1 JASPAR yes 60347653
chr13 111050187 111050202 MEF2C JASPAR yes 19342971
chr13 111050187 111050202 MEF2C JASPAR yes 60347654
chr13 111050188 111050200 FOXC2 JASPAR yes 19342972
chr13 111050188 111050200 FOXC2 JASPAR yes 60347655
chr13 111050188 111050202 FOXF2 JASPAR yes 19342973
chr13 111050188 111050202 FOXF2 JASPAR yes 60347656
chr13 111050189 111050200 FOXC1 JASPAR yes 19342974
chr13 111050189 111050200 FOXC1 JASPAR yes 60347657
chr13 111050190 111050194 YY1 TRANSFAC yes 19342975
chr13 111050190 111050194 YY1 TRANSFAC yes 60347658
chr13 111050192 111050205 POU3F3 JASPAR yes 19342976
chr13 111050192 111050205 POU3F3 JASPAR yes 60347659
chr13 111050195 111050210 MEF2A JASPAR yes 19342977
chr13 111050195 111050210 MEF2A JASPAR yes 60347660
chr13 111050196 111050211 MEF2C JASPAR yes 19342978
chr13 111050196 111050211 MEF2C JASPAR yes 60347661
chr13 111050197 111050209 MEF2A JASPAR yes 19342979
chr13 111050197 111050209 MEF2D JASPAR yes 19342980
chr13 111050197 111050209 MEF2A JASPAR yes 60347662
chr13 111050197 111050209 MEF2D JASPAR yes 60347663
chr13 111050199 111050203 YY1 TRANSFAC yes 19342981
chr13 111050199 111050203 YY1 TRANSFAC yes 60347664
chr13 111050226 111050241 MYBL2 JASPAR yes 19342982
chr13 111050226 111050241 MYBL2 JASPAR yes 60347665
chr13 111050230 111050242 HNF1B JASPAR yes 19342983
chr13 111050230 111050242 HNF1B JASPAR yes 60347666
chr13 111050230 111050243 HNF1B JASPAR yes 19342984
chr13 111050230 111050243 HNF1B JASPAR yes 60347667
chr13 111050241 111050253 ZBTB7B JASPAR yes 19342985
chr13 111050241 111050253 ZBTB7C JASPAR yes 19342986
chr13 111050241 111050253 ZBTB7B JASPAR yes 60347668
chr13 111050241 111050253 ZBTB7C JASPAR yes 60347669
chr13 111050254 111050259 NFY TRANSFAC yes 19342987
chr13 111050254 111050259 NFY TRANSFAC yes 60347670
chr13 111050257 111050264 NFATC2 JASPAR yes 19342988
chr13 111050257 111050264 NFATC2 JASPAR yes 60347671
chr13 111050267 111050271 LFA1 TRANSFAC yes 19342989
chr13 111050267 111050271 LFA1 TRANSFAC yes 60347672
chr13 111050286 111050298 NHLH1 JASPAR yes 19342990
chr13 111050286 111050298 NHLH1 JASPAR yes 60347673
chr13 111050287 111050297 MSC JASPAR yes 19342991
chr13 111050287 111050297 MSC JASPAR yes 60347674
chr13 111050305 111050319 BATF3 JASPAR yes 19342992
chr13 111050305 111050319 BATF3 JASPAR yes 60347675
chr13 111050306 111050318 PROX1 JASPAR yes 19342993
chr13 111050306 111050318 PROX1 JASPAR yes 60347676
chr13 111050319 111050330 STAT1 JASPAR yes 19342994
chr13 111050319 111050330 STAT3 JASPAR yes 19342995
chr13 111050319 111050330 STAT1 JASPAR yes 60347677
chr13 111050319 111050330 STAT3 JASPAR yes 60347678
chr13 111050326 111050339 HSF1 JASPAR yes 19342996
chr13 111050326 111050339 HSF4 JASPAR yes 19342997
chr13 111050326 111050339 HSF1 JASPAR yes 60347679
chr13 111050326 111050339 HSF4 JASPAR yes 60347680
chr13 111050345 111050366 IRF1 JASPAR yes 19342998
chr13 111050345 111050366 IRF1 JASPAR yes 60347681
chr13 111050347 111050362 IRF9 JASPAR yes 19342999
chr13 111050347 111050362 IRF9 JASPAR yes 60347682
chr13 111050348 111050362 IRF7 JASPAR yes 19343000
chr13 111050348 111050362 IRF8 JASPAR yes 19343001
chr13 111050348 111050362 IRF7 JASPAR yes 60347683
chr13 111050348 111050362 IRF8 JASPAR yes 60347684
chr13 111050376 111050380 YY1 TRANSFAC yes 19343002
chr13 111050376 111050380 YY1 TRANSFAC yes 60347685
chr13 111050381 111050385 YY1 TRANSFAC yes 19343003
chr13 111050381 111050385 YY1 TRANSFAC yes 60347686
chr13 111050389 111050404 LEF1 JASPAR yes 19343004
chr13 111050389 111050404 LEF1 JASPAR yes 60347687
chr13 111050390 111050404 TCF7L2 JASPAR yes 19343005
chr13 111050390 111050404 TCF7L2 JASPAR yes 60347688
SNP sites on vista17050[chr13:111049993-111050394]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr13 111050100 rs528418947 G A
THAP1
3394194
chr13 111050160 rs74127436 G A no 3394195
chr13 111050321 rs7983374 T C
STAT1 STAT3
3394196
chr13 111050335 rs9555696 G A
HSF1 HSF4
3394197
chr13 111050363 rs139935701 TC T
IRF1
3394198
Genes possibly regulated by vista17050[chr13:111049993-111050394]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr13 110801318 110959496 - COL4A1 ENSG00000187498.10 110959496 0.85 0.93 13019 9503
chr13 110958159 111165374 + COL4A2 ENSG00000134871.13 110958159 0.78 0.91 13020 8166
Expression level of Genes
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miRNAs possibly regulated by vista17050[chr13:111049993-111050394]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results