EnhancerDB
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  3. vista17060[chr13:111172874-111173635]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista17060[chr13:111172874-111173635]
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Tissue distribution of vista17060
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Transcription factor that possibly regulate vista17060[chr13:111172874-111173635]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr13 111173200 111173464 STAT3 UCSC Txn Factor no Conserved 108089709
chr13 111172873 111172884 STAT3 JASPAR yes 19343443
chr13 111172873 111172884 STAT3 JASPAR yes 60354865
chr13 111172895 111172906 FOXP2 JASPAR yes 19343444
chr13 111172895 111172906 FOXP2 JASPAR yes 60354866
chr13 111172897 111172905 FOXO3 JASPAR yes 19343445
chr13 111172897 111172905 FOXO3 JASPAR yes 60354867
chr13 111172900 111172911 STAT1 JASPAR yes 19343446
chr13 111172900 111172911 STAT3 JASPAR yes 19343447
chr13 111172900 111172911 STAT1 JASPAR yes 60354868
chr13 111172900 111172911 STAT3 JASPAR yes 60354869
chr13 111172923 111172937 SPI1 JASPAR yes 19343448
chr13 111172923 111172937 SPI1 JASPAR yes 60354870
chr13 111172924 111172937 ELF1 JASPAR yes 19343449
chr13 111172924 111172937 ELF1 JASPAR yes 60354871
chr13 111172925 111172937 EHF JASPAR yes 19343450
chr13 111172925 111172937 ELF1 JASPAR yes 19343451
chr13 111172925 111172937 ELF4 JASPAR yes 19343452
chr13 111172925 111172937 EHF JASPAR yes 60354872
chr13 111172925 111172937 ELF1 JASPAR yes 60354873
chr13 111172925 111172937 ELF4 JASPAR yes 60354874
chr13 111172925 111172938 ELF3 JASPAR yes 19343453
chr13 111172925 111172938 ELF3 JASPAR yes 60354875
chr13 111172926 111172937 ELF5 JASPAR yes 19343454
chr13 111172926 111172937 SPDEF JASPAR yes 19343455
chr13 111172926 111172937 ELF5 JASPAR yes 60354876
chr13 111172926 111172937 SPDEF JASPAR yes 60354877
chr13 111172927 111172934 ETS1 TRANSFAC yes 19343456
chr13 111172927 111172934 ETS1 TRANSFAC yes 60354878
chr13 111172927 111172937 ETV6 JASPAR yes 19343457
chr13 111172927 111172937 ETV6 JASPAR yes 60354879
chr13 111172927 111172938 ELK4 JASPAR yes 19343458
chr13 111172927 111172938 FLI1 JASPAR yes 19343459
chr13 111172927 111172938 ELK4 JASPAR yes 60354880
chr13 111172927 111172938 FLI1 JASPAR yes 60354881
chr13 111172928 111172936 EHF JASPAR yes 19343460
chr13 111172928 111172936 FEV JASPAR yes 19343461
chr13 111172928 111172936 EHF JASPAR yes 60354882
chr13 111172928 111172936 FEV JASPAR yes 60354883
chr13 111172929 111172936 SPI1 JASPAR yes 19343462
chr13 111172929 111172936 SPI1 JASPAR yes 60354884
chr13 111172936 111172954 SRF JASPAR yes 19343463
chr13 111172936 111172954 SRF JASPAR yes 60354885
chr13 111172938 111172942 H4TF2 TRANSFAC yes 19343464
chr13 111172938 111172942 H4TF2 TRANSFAC yes 60354886
chr13 111172938 111172953 MEF2C JASPAR yes 19343465
chr13 111172938 111172953 MEF2C JASPAR yes 60354887
chr13 111172943 111172949 HiNF-A TRANSFAC yes 19343466
chr13 111172943 111172949 HiNF-A TRANSFAC yes 60354888
chr13 111172947 111172961 XBP1 JASPAR yes 19343467
chr13 111172947 111172961 XBP1 JASPAR yes 60354889
chr13 111172948 111172962 CREB3 JASPAR yes 19343468
chr13 111172948 111172962 CREB3 JASPAR yes 60354890
chr13 111172953 111172958 ATF1 TRANSFAC yes 19343469
chr13 111172953 111172958 ATF1 TRANSFAC yes 60354891
chr13 111172988 111172993 TFAP2A TRANSFAC yes 19343470
chr13 111172988 111172993 TFAP2A TRANSFAC yes 60354892
chr13 111172988 111172994 MZF1 JASPAR yes 19343471
chr13 111172988 111172994 MZF1 JASPAR yes 60354893
chr13 111172989 111172999 SP1 JASPAR yes 19343472
chr13 111172989 111172999 SP1 JASPAR yes 60354894
chr13 111172990 111172995 ETS2 TRANSFAC yes 19343473
chr13 111172990 111172995 ETS2 TRANSFAC yes 60354895
chr13 111173022 111173037 RUNX2 JASPAR yes 19343474
chr13 111173022 111173037 RUNX2 JASPAR yes 60354896
chr13 111173023 111173034 RUNX1 JASPAR yes 19343475
chr13 111173023 111173034 RUNX1 JASPAR yes 60354897
chr13 111173032 111173042 SP1 JASPAR yes 19343476
chr13 111173032 111173042 SP1 JASPAR yes 60354898
chr13 111173035 111173047 INSM1 JASPAR yes 19343477
chr13 111173035 111173047 INSM1 JASPAR yes 60354899
chr13 111173037 111173057 ESR1 JASPAR yes 19343478
chr13 111173037 111173057 ESR1 JASPAR yes 60354900
chr13 111173041 111173059 ESR2 JASPAR yes 19343479
chr13 111173041 111173059 ESR2 JASPAR yes 60354901
chr13 111173042 111173057 ESR2 JASPAR yes 19343480
chr13 111173042 111173057 ESR2 JASPAR yes 60354902
chr13 111173080 111173084 LFA1 TRANSFAC yes 19343481
chr13 111173080 111173084 LFA1 TRANSFAC yes 60354903
chr13 111173086 111173094 FEV JASPAR yes 19343482
chr13 111173086 111173094 FEV JASPAR yes 60354904
chr13 111173100 111173114 CREB3L1 JASPAR yes 19343483
chr13 111173100 111173114 CREB3L1 JASPAR yes 60354905
chr13 111173104 111173115 TBX2 JASPAR yes 19343484
chr13 111173104 111173115 TBX2 JASPAR yes 60354906
chr13 111173105 111173113 TBX15 JASPAR yes 19343485
chr13 111173105 111173113 TBX1 JASPAR yes 19343486
chr13 111173105 111173113 TBX4 JASPAR yes 19343487
chr13 111173105 111173113 TBX5 JASPAR yes 19343488
chr13 111173105 111173113 TBX15 JASPAR yes 60354907
chr13 111173105 111173113 TBX1 JASPAR yes 60354908
chr13 111173105 111173113 TBX4 JASPAR yes 60354909
chr13 111173105 111173113 TBX5 JASPAR yes 60354910
chr13 111173137 111173142 TFAP2A TRANSFAC yes 19343489
chr13 111173137 111173142 TFAP2A TRANSFAC yes 60354911
chr13 111173137 111173143 MZF1 JASPAR yes 19343490
chr13 111173137 111173143 MZF1 JASPAR yes 60354912
chr13 111173146 111173159 ZBTB18 JASPAR yes 19343491
chr13 111173146 111173159 ZBTB18 JASPAR yes 60354913
chr13 111173174 111173193 REST JASPAR yes 19343492
chr13 111173174 111173193 REST JASPAR yes 60354914
chr13 111173176 111173188 GLI2 JASPAR yes 19343493
chr13 111173176 111173188 GLI2 JASPAR yes 60354915
chr13 111173176 111173191 RUNX2 JASPAR yes 19343494
chr13 111173176 111173191 RUNX2 JASPAR yes 60354916
chr13 111173177 111173187 RUNX3 JASPAR yes 19343495
chr13 111173177 111173187 RUNX3 JASPAR yes 60354917
chr13 111173192 111173207 HNF4A JASPAR yes 19343496
chr13 111173192 111173207 HNF4A JASPAR yes 60354918
chr13 111173193 111173207 NR2F1 JASPAR yes 19343497
chr13 111173193 111173207 NR2F1 JASPAR yes 60354919
chr13 111173193 111173208 HNF4G JASPAR yes 19343498
chr13 111173193 111173208 HNF4G JASPAR yes 60354920
chr13 111173238 111173244 LEF1 TRANSFAC yes 19343499
chr13 111173238 111173244 SOX10 JASPAR yes 19343500
chr13 111173238 111173244 LEF1 TRANSFAC yes 60354921
chr13 111173238 111173244 SOX10 JASPAR yes 60354922
chr13 111173244 111173250 SOX10 JASPAR yes 19343501
chr13 111173244 111173250 SOX10 JASPAR yes 60354923
chr13 111173247 111173252 ETS2 TRANSFAC yes 19343502
chr13 111173247 111173252 ETS2 TRANSFAC yes 60354924
chr13 111173262 111173272 RORA JASPAR yes 19343503
chr13 111173262 111173272 RORA JASPAR yes 60354925
chr13 111173263 111173274 ESRRA JASPAR yes 19343504
chr13 111173263 111173274 ESRRA JASPAR yes 60354926
chr13 111173263 111173276 NR2F1 JASPAR yes 19343505
chr13 111173263 111173276 NR2F1 JASPAR yes 60354927
chr13 111173265 111173273 NR4A2 JASPAR yes 19343506
chr13 111173265 111173273 NR4A2 JASPAR yes 60354928
chr13 111173267 111173271 ESR1 TRANSFAC yes 19343507
chr13 111173267 111173271 ESR1 TRANSFAC yes 60354929
chr13 111173278 111173290 IRF1 JASPAR yes 19343508
chr13 111173278 111173290 IRF1 JASPAR yes 60354930
chr13 111173293 111173298 TFAP2A TRANSFAC yes 19343509
chr13 111173293 111173298 TFAP2A TRANSFAC yes 60354931
chr13 111173293 111173299 MZF1 JASPAR yes 19343510
chr13 111173293 111173299 MZF1 JASPAR yes 60354932
chr13 111173308 111173320 NHLH1 JASPAR yes 19343511
chr13 111173308 111173320 NHLH1 JASPAR yes 60354933
chr13 111173309 111173319 MSC JASPAR yes 19343512
chr13 111173309 111173319 NHLH1 JASPAR yes 19343513
chr13 111173309 111173319 TFAP4 JASPAR yes 19343514
chr13 111173309 111173319 MSC JASPAR yes 60354934
chr13 111173309 111173319 NHLH1 JASPAR yes 60354935
chr13 111173309 111173319 TFAP4 JASPAR yes 60354936
chr13 111173318 111173329 CEBPA JASPAR yes 19343515
chr13 111173318 111173329 CEBPA JASPAR yes 60354937
chr13 111173333 111173338 H4TF1 TRANSFAC yes 19343516
chr13 111173333 111173338 H4TF1 TRANSFAC yes 60354938
chr13 111173340 111173357 BCL6B JASPAR yes 19343517
chr13 111173340 111173357 BCL6B JASPAR yes 60354939
chr13 111173341 111173356 STAT1 JASPAR yes 19343518
chr13 111173341 111173356 STAT1 JASPAR yes 60354940
chr13 111173343 111173354 STAT1 JASPAR yes 19343519
chr13 111173343 111173354 STAT3 JASPAR yes 19343520
chr13 111173343 111173354 STAT1 JASPAR yes 60354941
chr13 111173343 111173354 STAT3 JASPAR yes 60354942
chr13 111173352 111173366 XBP1 JASPAR yes 19343521
chr13 111173352 111173366 XBP1 JASPAR yes 60354943
chr13 111173354 111173359 ATF1 TRANSFAC yes 19343522
chr13 111173354 111173359 ATF1 TRANSFAC yes 60354944
chr13 111173358 111173375 BCL6B JASPAR yes 19343523
chr13 111173358 111173375 BCL6B JASPAR yes 60354945
chr13 111173369 111173374 ETS2 TRANSFAC yes 19343524
chr13 111173369 111173374 ETS2 TRANSFAC yes 60354946
chr13 111173370 111173385 HNF4G JASPAR yes 19343525
chr13 111173370 111173385 HNF4G JASPAR yes 60354947
chr13 111173371 111173386 HNF4A JASPAR yes 19343526
chr13 111173371 111173386 HNF4A JASPAR yes 60354948
chr13 111173380 111173391 USF1 JASPAR yes 19343527
chr13 111173380 111173391 USF2 JASPAR yes 19343528
chr13 111173380 111173391 USF1 JASPAR yes 60354949
chr13 111173380 111173391 USF2 JASPAR yes 60354950
chr13 111173389 111173410 ZNF263 JASPAR yes 19343529
chr13 111173389 111173410 ZNF263 JASPAR yes 60354951
chr13 111173396 111173401 SP1 TRANSFAC yes 19343530
chr13 111173396 111173401 SP1 TRANSFAC yes 60354952
chr13 111173397 111173407 ZNF740 JASPAR yes 19343531
chr13 111173397 111173407 ZNF740 JASPAR yes 60354953
chr13 111173397 111173417 PPARG JASPAR yes 19343532
chr13 111173397 111173417 PPARG JASPAR yes 60354954
chr13 111173424 111173430 MZF1 JASPAR yes 19343533
chr13 111173424 111173430 MZF1 JASPAR yes 60354955
chr13 111173433 111173446 SMAD2 JASPAR yes 19343534
chr13 111173433 111173446 SMAD2 JASPAR yes 60354956
chr13 111173445 111173460 HNF4G JASPAR yes 19343535
chr13 111173445 111173460 HNF4G JASPAR yes 60354957
chr13 111173446 111173460 NR2F1 JASPAR yes 19343536
chr13 111173446 111173460 NR2F1 JASPAR yes 60354958
chr13 111173446 111173461 HNF4A JASPAR yes 19343537
chr13 111173446 111173461 HNF4A JASPAR yes 60354959
chr13 111173447 111173452 GATA2 JASPAR yes 19343538
chr13 111173447 111173452 GATA2 JASPAR yes 60354960
chr13 111173454 111173458 H4TF2 TRANSFAC yes 19343539
chr13 111173454 111173458 H4TF2 TRANSFAC yes 60354961
chr13 111173459 111173471 TEAD1 JASPAR yes 19343540
chr13 111173459 111173471 TEAD1 JASPAR yes 60354962
chr13 111173461 111173471 TEAD1 JASPAR yes 19343541
chr13 111173461 111173471 TEAD4 JASPAR yes 19343542
chr13 111173461 111173471 TEAD1 JASPAR yes 60354963
chr13 111173461 111173471 TEAD4 JASPAR yes 60354964
chr13 111173462 111173470 TEAD3 JASPAR yes 19343543
chr13 111173462 111173470 TEAD3 JASPAR yes 60354965
chr13 111173474 111173491 NR3C1 JASPAR yes 19343544
chr13 111173474 111173491 NR3C2 JASPAR yes 19343545
chr13 111173474 111173491 NR3C1 JASPAR yes 60354966
chr13 111173474 111173491 NR3C2 JASPAR yes 60354967
chr13 111173481 111173496 RFX5 JASPAR yes 19343546
chr13 111173481 111173496 RFX5 JASPAR yes 60354968
chr13 111173483 111173497 PLAG1 JASPAR yes 19343547
chr13 111173483 111173497 PLAG1 JASPAR yes 60354969
chr13 111173491 111173505 PLAG1 JASPAR yes 19343548
chr13 111173491 111173505 PLAG1 JASPAR yes 60354970
chr13 111173492 111173497 SP1 TRANSFAC yes 19343549
chr13 111173492 111173497 SP1 TRANSFAC yes 60354971
chr13 111173508 111173512 NFE TRANSFAC yes 19343550
chr13 111173508 111173512 NFE TRANSFAC yes 60354972
chr13 111173513 111173518 MYB TRANSFAC yes 19343551
chr13 111173513 111173518 MYB TRANSFAC yes 60354973
chr13 111173520 111173524 NFE TRANSFAC yes 19343552
chr13 111173520 111173524 NFE TRANSFAC yes 60354974
chr13 111173525 111173529 H1TF2 TRANSFAC yes 19343553
chr13 111173525 111173529 NFE TRANSFAC yes 19343554
chr13 111173525 111173529 SRF TRANSFAC yes 19343555
chr13 111173525 111173529 H1TF2 TRANSFAC yes 60354975
chr13 111173525 111173529 NFE TRANSFAC yes 60354976
chr13 111173525 111173529 SRF TRANSFAC yes 60354977
chr13 111173525 111173531 NFYC TRANSFAC yes 19343556
chr13 111173525 111173531 NFYC TRANSFAC yes 60354978
chr13 111173533 111173552 REST JASPAR yes 19343557
chr13 111173533 111173552 REST JASPAR yes 60354979
chr13 111173539 111173546 ETS1 TRANSFAC yes 19343558
chr13 111173539 111173546 ETS1 TRANSFAC yes 60354980
chr13 111173540 111173548 EHF JASPAR yes 19343559
chr13 111173540 111173548 EHF JASPAR yes 60354981
chr13 111173542 111173563 REST JASPAR yes 19343560
chr13 111173542 111173563 REST JASPAR yes 60354982
chr13 111173567 111173585 MAFF JASPAR yes 19343561
chr13 111173567 111173585 MAFF JASPAR yes 60354983
chr13 111173569 111173584 MAFK JASPAR yes 19343562
chr13 111173569 111173584 MAFK JASPAR yes 60354984
chr13 111173572 111173588 POU4F3 JASPAR yes 19343563
chr13 111173572 111173588 POU4F3 JASPAR yes 60354985
chr13 111173578 111173589 HOXC13 JASPAR yes 19343564
chr13 111173578 111173589 HOXC13 JASPAR yes 60354986
chr13 111173579 111173589 EMX1 JASPAR yes 19343565
chr13 111173579 111173589 EMX1 JASPAR yes 60354987
chr13 111173580 111173588 NKX6-1 JASPAR yes 19343566
chr13 111173580 111173588 NKX6-2 JASPAR yes 19343567
chr13 111173580 111173588 NKX6-1 JASPAR yes 60354988
chr13 111173580 111173588 NKX6-2 JASPAR yes 60354989
chr13 111173580 111173590 POU6F2 JASPAR yes 19343568
chr13 111173580 111173590 POU6F2 JASPAR yes 60354990
chr13 111173584 111173601 RARA JASPAR yes 19343569
chr13 111173584 111173601 RXRA JASPAR yes 19343570
chr13 111173584 111173601 RARA JASPAR yes 60354991
chr13 111173584 111173601 RXRA JASPAR yes 60354992
chr13 111173607 111173617 NKX2-3 JASPAR yes 19343571
chr13 111173607 111173617 NKX2-3 JASPAR yes 60354993
chr13 111173615 111173624 THAP1 JASPAR yes 19343572
chr13 111173615 111173624 THAP1 JASPAR yes 60354994
chr13 111173618 111173622 LFA1 TRANSFAC yes 19343573
chr13 111173618 111173622 LFA1 TRANSFAC yes 60354995
chr13 111173626 111173641 HSF1 JASPAR yes 19343574
chr13 111173626 111173641 HSF1 JASPAR yes 60354996
chr13 111173627 111173640 HSF4 JASPAR yes 19343575
chr13 111173627 111173640 HSF4 JASPAR yes 60354997
SNP sites on vista17060[chr13:111172874-111173635]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr13 111172888 rs78136073 C G no 3395360
chr13 111172915 rs375807073 A AG no 3395361
chr13 111172915 rs79974622 A AG no 3395362
chr13 111172940 rs543630247 G A
H4TF2 MEF2C SRF
3395363
chr13 111172964 rs546549769 C CT no 3395364
chr13 111173028 rs72659617 C G
RUNX1 RUNX2
3395365
chr13 111173064 rs559736329 C T no 3395366
chr13 111173238 rs75239002 G A
LEF1 SOX10 STAT3
3395367
chr13 111173258 rs530993606 G A
STAT3
3395368
chr13 111173307 rs371825267 G GCCGTCT
STAT3
3395369
chr13 111173307 rs555133046 G GCCGTCT
STAT3
3395370
chr13 111173586 rs558412369 G A
EMX1 HOXC13 NKX6-1 NKX6-2 POU4F3 POU6F2 RARA RXRA
3395371
Genes possibly regulated by vista17060[chr13:111172874-111173635]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr13 111175417 111214080 - RAB20 ENSG00000139832.3 111214080 0.75 1.0 13021 59555
chr13 111267881 111292340 + CARKD ENSG00000213995.7 111267881 0.73 1.0 13022 5754
Expression level of Genes
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miRNAs possibly regulated by vista17060[chr13:111172874-111173635]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results