EnhancerDB
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  3. vista17061[chr13:111174336-111174835]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista17061[chr13:111174336-111174835]
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Tissue distribution of vista17061
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Transcription factor that possibly regulate vista17061[chr13:111174336-111174835]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr13 111174334 111174338 YY1 TRANSFAC yes 19343576
chr13 111174334 111174338 YY1 TRANSFAC yes 60355081
chr13 111174340 111174354 ONECUT2 JASPAR yes 19343577
chr13 111174340 111174354 ONECUT3 JASPAR yes 19343578
chr13 111174340 111174354 ONECUT2 JASPAR yes 60355082
chr13 111174340 111174354 ONECUT3 JASPAR yes 60355083
chr13 111174342 111174353 FOXB1 JASPAR yes 19343579
chr13 111174342 111174353 FOXC1 JASPAR yes 19343580
chr13 111174342 111174353 FOXB1 JASPAR yes 60355084
chr13 111174342 111174353 FOXC1 JASPAR yes 60355085
chr13 111174342 111174354 FOXC2 JASPAR yes 19343581
chr13 111174342 111174354 FOXC2 JASPAR yes 60355086
chr13 111174343 111174355 FOXI1 JASPAR yes 19343582
chr13 111174343 111174355 FOXI1 JASPAR yes 60355087
chr13 111174350 111174354 TEAD2 TRANSFAC yes 19343583
chr13 111174350 111174354 TEAD2 TRANSFAC yes 60355088
chr13 111174352 111174355 MYB TRANSFAC yes 19343584
chr13 111174352 111174355 MYB TRANSFAC yes 60355089
chr13 111174358 111174362 NFE TRANSFAC yes 19343585
chr13 111174358 111174362 NFE TRANSFAC yes 60355090
chr13 111174383 111174395 FOXC2 JASPAR yes 19343586
chr13 111174383 111174395 FOXC2 JASPAR yes 60355091
chr13 111174386 111174397 HOXA10 JASPAR yes 19343587
chr13 111174386 111174397 HOXA10 JASPAR yes 60355092
chr13 111174387 111174397 HOXB13 JASPAR yes 19343588
chr13 111174387 111174397 HOXD13 JASPAR yes 19343589
chr13 111174387 111174397 HOXB13 JASPAR yes 60355093
chr13 111174387 111174397 HOXD13 JASPAR yes 60355094
chr13 111174402 111174422 ESR1 JASPAR yes 19343590
chr13 111174402 111174422 ESR1 JASPAR yes 60355095
chr13 111174412 111174430 IRF2 JASPAR yes 19343591
chr13 111174412 111174430 IRF2 JASPAR yes 60355096
chr13 111174441 111174451 CEBPB JASPAR yes 19343592
chr13 111174441 111174451 CEBPD JASPAR yes 19343593
chr13 111174441 111174451 CEBPE JASPAR yes 19343594
chr13 111174441 111174451 CEBPG JASPAR yes 19343595
chr13 111174441 111174451 CEBPB JASPAR yes 60355097
chr13 111174441 111174451 CEBPD JASPAR yes 60355098
chr13 111174441 111174451 CEBPE JASPAR yes 60355099
chr13 111174441 111174451 CEBPG JASPAR yes 60355100
chr13 111174444 111174458 IRF7 JASPAR yes 19343596
chr13 111174444 111174458 IRF7 JASPAR yes 60355101
chr13 111174476 111174487 EBF1 JASPAR yes 19343597
chr13 111174476 111174487 EBF1 JASPAR yes 60355102
chr13 111174519 111174538 CTCF JASPAR yes 19343598
chr13 111174519 111174538 CTCF JASPAR yes 60355103
chr13 111174523 111174534 EBF1 JASPAR yes 19343599
chr13 111174523 111174534 EBF1 JASPAR yes 60355104
chr13 111174543 111174551 EHF JASPAR yes 19343600
chr13 111174543 111174551 EHF JASPAR yes 60355105
chr13 111174545 111174550 ETS2 TRANSFAC yes 19343601
chr13 111174545 111174550 ETS2 TRANSFAC yes 60355106
chr13 111174624 111174635 NRL JASPAR yes 19343602
chr13 111174624 111174635 NRL JASPAR yes 60355107
chr13 111174644 111174650 MZF1 JASPAR yes 19343603
chr13 111174644 111174650 MZF1 JASPAR yes 60355108
chr13 111174645 111174660 FOXP1 JASPAR yes 19343604
chr13 111174645 111174660 FOXP1 JASPAR yes 60355109
chr13 111174648 111174659 FOXP2 JASPAR yes 19343605
chr13 111174648 111174659 FOXP2 JASPAR yes 60355110
chr13 111174708 111174722 RXRB JASPAR yes 19343606
chr13 111174708 111174722 RXRG JASPAR yes 19343607
chr13 111174708 111174722 RXRB JASPAR yes 60355111
chr13 111174708 111174722 RXRG JASPAR yes 60355112
chr13 111174733 111174737 LFA1 TRANSFAC yes 19343608
chr13 111174733 111174737 LFA1 TRANSFAC yes 60355113
chr13 111174736 111174748 YY1 JASPAR yes 19343609
chr13 111174736 111174748 YY1 JASPAR yes 60355114
chr13 111174741 111174755 TLX1 JASPAR yes 19343610
chr13 111174741 111174755 TLX1 JASPAR yes 60355115
chr13 111174749 111174769 RREB1 JASPAR yes 19343611
chr13 111174749 111174769 RREB1 JASPAR yes 60355116
chr13 111174757 111174772 MEF2C JASPAR yes 19343612
chr13 111174757 111174772 MEF2C JASPAR yes 60355117
chr13 111174760 111174775 FOXP1 JASPAR yes 19343613
chr13 111174760 111174775 FOXP1 JASPAR yes 60355118
chr13 111174761 111174776 FOXP1 JASPAR yes 19343614
chr13 111174761 111174776 FOXP1 JASPAR yes 60355119
chr13 111174779 111174795 ZNF143 JASPAR yes 19343615
chr13 111174779 111174795 ZNF143 JASPAR yes 60355120
chr13 111174780 111174790 SP1 JASPAR yes 19343616
chr13 111174780 111174790 SP1 JASPAR yes 60355121
chr13 111174780 111174800 ESR1 JASPAR yes 19343617
chr13 111174780 111174800 ESR1 JASPAR yes 60355122
chr13 111174781 111174785 LFA1 TRANSFAC yes 19343618
chr13 111174781 111174785 LFA1 TRANSFAC yes 60355123
chr13 111174781 111174801 TP63 JASPAR yes 19343619
chr13 111174781 111174801 TP63 JASPAR yes 60355124
chr13 111174782 111174800 TP53 JASPAR yes 19343620
chr13 111174782 111174800 TP73 JASPAR yes 19343621
chr13 111174782 111174800 TP53 JASPAR yes 60355125
chr13 111174782 111174800 TP73 JASPAR yes 60355126
chr13 111174789 111174801 HES5 JASPAR yes 19343622
chr13 111174789 111174801 HES7 JASPAR yes 19343623
chr13 111174789 111174801 PKNOX2 JASPAR yes 19343624
chr13 111174789 111174801 HES5 JASPAR yes 60355127
chr13 111174789 111174801 HES7 JASPAR yes 60355128
chr13 111174789 111174801 PKNOX2 JASPAR yes 60355129
chr13 111174789 111174805 T JASPAR yes 19343625
chr13 111174789 111174805 T JASPAR yes 60355130
chr13 111174792 111174811 PITX2 TRANSFAC yes 19343626
chr13 111174792 111174811 PITX2 TRANSFAC yes 60355131
SNP sites on vista17061[chr13:111174336-111174835]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr13 111174526 rs7327721 C T
CTCF EBF1
3395393
chr13 111174579 rs78554233 G A no 3395394
chr13 111174703 rs60063899 T C no 3395395
chr13 111174762 rs10635038 C CAAAAA
FOXP1 MEF2C RREB1
3395396
chr13 111174762 rs374374732 C CAAAAA
FOXP1 MEF2C RREB1
3395397
chr13 111174762 rs527373600 C CAAAA,CAAAAA
FOXP1 MEF2C RREB1
3395398
chr13 111174796 rs193069 A G
ESR1 HES5 HES7 PITX2 PKNOX2 T TP53 TP63 TP73
3395399
Genes possibly regulated by vista17061[chr13:111174336-111174835]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr13 111175417 111214080 - RAB20 ENSG00000139832.3 111214080 0.75 1.0 13021 60755
chr13 111267881 111292340 + CARKD ENSG00000213995.7 111267881 0.73 1.0 13022 6954
Expression level of Genes
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miRNAs possibly regulated by vista17061[chr13:111174336-111174835]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results