EnhancerDB
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  3. vista17063[chr13:111180820-111181023]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista17063[chr13:111180820-111181023]
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Tissue distribution of vista17063
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Transcription factor that possibly regulate vista17063[chr13:111180820-111181023]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr13 111180811 111180822 RUNX1 JASPAR yes 19343688
chr13 111180811 111180822 RUNX1 JASPAR yes 60355985
chr13 111180829 111180835 TCF4 TRANSFAC yes 19343689
chr13 111180829 111180835 TCF4 TRANSFAC yes 60355986
chr13 111180844 111180853 PITX3 JASPAR yes 19343690
chr13 111180844 111180853 PITX3 JASPAR yes 60355987
chr13 111180844 111180854 GSC2 JASPAR yes 19343691
chr13 111180844 111180854 GSC JASPAR yes 19343692
chr13 111180844 111180854 GSC2 JASPAR yes 60355988
chr13 111180844 111180854 GSC JASPAR yes 60355989
chr13 111180845 111180853 OTX1 JASPAR yes 19343693
chr13 111180845 111180853 OTX1 JASPAR yes 60355990
chr13 111180855 111180862 GATA3 TRANSFAC yes 19343694
chr13 111180855 111180862 GATA3 TRANSFAC yes 60355991
chr13 111180855 111180863 GATA5 JASPAR yes 19343695
chr13 111180855 111180863 GATA5 JASPAR yes 60355992
chr13 111180858 111180861 MYB TRANSFAC yes 19343696
chr13 111180858 111180861 MYB TRANSFAC yes 60355993
chr13 111180893 111180907 BATF3 JASPAR yes 19343697
chr13 111180893 111180907 BATF3 JASPAR yes 60355994
chr13 111180896 111180907 DUX4 JASPAR yes 19343698
chr13 111180896 111180907 DUX4 JASPAR yes 60355995
chr13 111180897 111180909 CREB1 JASPAR yes 19343699
chr13 111180897 111180909 CREB1 JASPAR yes 60355996
chr13 111180898 111180903 ATF1 TRANSFAC yes 19343700
chr13 111180898 111180903 ATF1 TRANSFAC yes 60355997
chr13 111180921 111180926 H4TF1 TRANSFAC yes 19343701
chr13 111180921 111180926 H4TF1 TRANSFAC yes 60355998
chr13 111180922 111180933 CEBPA JASPAR yes 19343702
chr13 111180922 111180933 CEBPA JASPAR yes 60355999
chr13 111180923 111180939 T JASPAR yes 19343703
chr13 111180923 111180939 T JASPAR yes 60356000
chr13 111180959 111180963 LFA1 TRANSFAC yes 19343704
chr13 111180959 111180963 LFA1 TRANSFAC yes 60356001
chr13 111180999 111181011 HLF JASPAR yes 19343705
chr13 111180999 111181011 HLF JASPAR yes 60356002
SNP sites on vista17063[chr13:111180820-111181023]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr13 111180852 rs145082115 C T
GSC GSC2 OTX1 PITX3
3395525
chr13 111180880 rs11280881 G GTTTTTAC no 3395526
Genes possibly regulated by vista17063[chr13:111180820-111181023]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr13 111175417 111214080 - RAB20 ENSG00000139832.3 111214080 0.75 1.0 13021 66943
chr13 111267881 111292340 + CARKD ENSG00000213995.7 111267881 0.73 1.0 13022 13142
Expression level of Genes
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miRNAs possibly regulated by vista17063[chr13:111180820-111181023]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results