EnhancerDB
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  3. vista17064[chr13:111184119-111184417]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista17064[chr13:111184119-111184417]
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Tissue distribution of vista17064
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Transcription factor that possibly regulate vista17064[chr13:111184119-111184417]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr13 111184127 111184131 H1TF2 TRANSFAC yes 19343706
chr13 111184127 111184131 NFE TRANSFAC yes 19343707
chr13 111184127 111184131 SRF TRANSFAC yes 19343708
chr13 111184156 111184167 ESRRB JASPAR yes 19343709
chr13 111184158 111184173 NR2C2 JASPAR yes 19343710
chr13 111184159 111184180 REST JASPAR yes 19343711
chr13 111184160 111184179 REST JASPAR yes 19343712
chr13 111184171 111184175 H4TF2 TRANSFAC yes 19343713
chr13 111184172 111184184 INSM1 JASPAR yes 19343714
chr13 111184177 111184188 NFKB1 JASPAR yes 19343715
chr13 111184185 111184194 ELK4 JASPAR yes 19343716
chr13 111184185 111184195 ETV1 JASPAR yes 19343717
chr13 111184185 111184195 ETV4 JASPAR yes 19343718
chr13 111184185 111184195 ETV5 JASPAR yes 19343719
chr13 111184185 111184195 FEV JASPAR yes 19343720
chr13 111184216 111184231 HNF4A JASPAR yes 19343721
chr13 111184224 111184245 ZNF263 JASPAR yes 19343722
chr13 111184228 111184249 ZNF263 JASPAR yes 19343723
chr13 111184238 111184243 ETS2 TRANSFAC yes 19343724
chr13 111184243 111184248 ETS2 TRANSFAC yes 19343725
chr13 111184266 111184277 FOSL1 JASPAR yes 19343726
chr13 111184271 111184288 PAX1 JASPAR yes 19343727
chr13 111184271 111184288 PAX9 JASPAR yes 19343728
chr13 111184282 111184297 STAT2 JASPAR yes 19343729
chr13 111184299 111184320 IRF1 JASPAR yes 19343730
chr13 111184301 111184316 PRDM1 JASPAR yes 19343731
chr13 111184301 111184316 STAT2 JASPAR yes 19343732
chr13 111184307 111184322 PRDM1 JASPAR yes 19343733
chr13 111184309 111184313 YY1 TRANSFAC yes 19343734
chr13 111184328 111184348 RREB1 JASPAR yes 19343735
chr13 111184330 111184342 IRF1 JASPAR yes 19343736
chr13 111184337 111184343 HiNF-A TRANSFAC yes 19343737
chr13 111184366 111184378 IRF1 JASPAR yes 19343738
chr13 111184366 111184381 IRF9 JASPAR yes 19343739
chr13 111184367 111184385 IRF2 JASPAR yes 19343740
chr13 111184368 111184389 IRF1 JASPAR yes 19343741
chr13 111184372 111184384 IRF1 JASPAR yes 19343742
chr13 111184405 111184411 GATA3 JASPAR yes 19343743
chr13 111184410 111184416 YY1 JASPAR yes 19343744
SNP sites on vista17064[chr13:111184119-111184417]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr13 111184171 rs142544553 T A
H4TF2 NR2C2 REST
3395572
chr13 111184196 rs77995515 G A no 3395573
chr13 111184213 rs140809235 G A no 3395574
chr13 111184256 rs2025905 C G no 3395575
chr13 111184283 rs533816635 G A
PAX1 PAX9 STAT2
3395576
chr13 111184311 rs144925845 A G
IRF1 PRDM1 STAT2 YY1
3395577
chr13 111184364 rs116548274 T C,G no 3395578
chr13 111184394 rs151244847 A AAG no 3395579
Genes possibly regulated by vista17064[chr13:111184119-111184417]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr13 111175417 111214080 - RAB20 ENSG00000139832.3 111214080 0.75 1.0 13021 70337
chr13 111267881 111292340 + CARKD ENSG00000213995.7 111267881 0.73 1.0 13022 16536
Expression level of Genes
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miRNAs possibly regulated by vista17064[chr13:111184119-111184417]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results