EnhancerDB
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  3. vista17066[chr13:111212014-111212166]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista17066[chr13:111212014-111212166]
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Tissue distribution of vista17066
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Transcription factor that possibly regulate vista17066[chr13:111212014-111212166]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr13 111212006 111212021 STAT1 JASPAR yes 19343798
chr13 111212006 111212021 STAT1 JASPAR yes 60359998
chr13 111212008 111212019 STAT1 JASPAR yes 19343799
chr13 111212008 111212019 STAT3 JASPAR yes 19343800
chr13 111212008 111212019 STAT1 JASPAR yes 60359999
chr13 111212008 111212019 STAT3 JASPAR yes 60360000
chr13 111212008 111212021 ELF1 JASPAR yes 19343801
chr13 111212008 111212021 ELF1 JASPAR yes 60360001
chr13 111212011 111212022 FLI1 JASPAR yes 19343802
chr13 111212011 111212022 FLI1 JASPAR yes 60360002
chr13 111212012 111212020 FEV JASPAR yes 19343803
chr13 111212012 111212020 FEV JASPAR yes 60360003
chr13 111212026 111212032 NFE2 TRANSFAC yes 19343804
chr13 111212026 111212032 NFE2 TRANSFAC yes 60360004
chr13 111212027 111212041 GLIS3 JASPAR yes 19343805
chr13 111212027 111212041 GLIS3 JASPAR yes 60360005
chr13 111212028 111212042 GLIS2 JASPAR yes 19343806
chr13 111212028 111212042 GLIS2 JASPAR yes 60360006
chr13 111212037 111212040 MYB TRANSFAC yes 19343807
chr13 111212037 111212040 MYB TRANSFAC yes 60360007
chr13 111212060 111212070 SREBF2 JASPAR yes 19343808
chr13 111212060 111212070 SREBF2 JASPAR yes 60360008
chr13 111212065 111212076 NRL JASPAR yes 19343809
chr13 111212065 111212076 NRL JASPAR yes 60360009
chr13 111212069 111212082 ZBTB18 JASPAR yes 19343810
chr13 111212069 111212082 ZBTB18 JASPAR yes 60360010
chr13 111212108 111212129 REST JASPAR yes 19343811
chr13 111212108 111212129 REST JASPAR yes 60360011
chr13 111212109 111212128 REST JASPAR yes 19343812
chr13 111212109 111212128 REST JASPAR yes 60360012
chr13 111212118 111212139 MAFG JASPAR yes 19343813
chr13 111212118 111212139 MAFG JASPAR yes 60360013
chr13 111212140 111212161 IRF1 JASPAR yes 19343814
chr13 111212140 111212161 IRF1 JASPAR yes 60360014
chr13 111212142 111212157 IRF9 JASPAR yes 19343815
chr13 111212142 111212157 IRF9 JASPAR yes 60360015
chr13 111212144 111212158 STAT1 JASPAR yes 19343816
chr13 111212144 111212158 STAT1 JASPAR yes 60360016
chr13 111212144 111212159 STAT2 JASPAR yes 19343817
chr13 111212144 111212159 STAT2 JASPAR yes 60360017
chr13 111212145 111212157 IRF1 JASPAR yes 19343818
chr13 111212145 111212157 IRF1 JASPAR yes 60360018
SNP sites on vista17066[chr13:111212014-111212166]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr13 111212061 rs576337685 G A
SREBF2
3396071
chr13 111212152 rs145007285 G C
IRF1 IRF9 STAT1 STAT2
3396072
Genes possibly regulated by vista17066[chr13:111212014-111212166]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr13 111175417 111214080 - RAB20 ENSG00000139832.3 111214080 0.75 1.0 13021 98086
chr13 111267881 111292340 + CARKD ENSG00000213995.7 111267881 0.73 1.0 13022 44285
Expression level of Genes
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miRNAs possibly regulated by vista17066[chr13:111212014-111212166]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results