EnhancerDB
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  3. vista17068[chr13:111227983-111228269]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista17068[chr13:111227983-111228269]
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Tissue distribution of vista17068
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Transcription factor that possibly regulate vista17068[chr13:111227983-111228269]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr13 111227987 111228489 RUNX3 UCSC Txn Factor no Conserved 108089844
chr13 111228072 111228298 SPI1 UCSC Txn Factor no Conserved 108089850
chr13 111227986 111228000 EBF1 JASPAR yes 19343884
chr13 111227986 111228000 EBF1 JASPAR yes 60360793
chr13 111227988 111227999 EBF1 JASPAR yes 19343885
chr13 111227988 111227999 EBF1 JASPAR yes 60360794
chr13 111227992 111227997 TFAP2A TRANSFAC yes 19343886
chr13 111227992 111227997 TFAP2A TRANSFAC yes 60360795
chr13 111227992 111227998 MZF1 JASPAR yes 19343887
chr13 111227992 111227998 MZF1 JASPAR yes 60360796
chr13 111227993 111228004 NFKB1 JASPAR yes 19343888
chr13 111227993 111228004 NFKB1 JASPAR yes 60360797
chr13 111227994 111227999 ETS2 TRANSFAC yes 19343889
chr13 111227994 111227999 ETS2 TRANSFAC yes 60360798
chr13 111228005 111228024 CTCF JASPAR yes 19343890
chr13 111228005 111228024 CTCF JASPAR yes 60360799
chr13 111228007 111228015 NR4A2 JASPAR yes 19343891
chr13 111228007 111228015 NR4A2 JASPAR yes 60360800
chr13 111228021 111228039 ESR2 JASPAR yes 19343892
chr13 111228021 111228039 ESR2 JASPAR yes 60360801
chr13 111228051 111228067 NFYA JASPAR yes 19343893
chr13 111228051 111228067 NFYA JASPAR yes 60360802
chr13 111228054 111228069 NFYB JASPAR yes 19343894
chr13 111228054 111228069 NFYB JASPAR yes 60360803
chr13 111228065 111228083 ESR2 JASPAR yes 19343895
chr13 111228065 111228083 NR3C1 JASPAR yes 19343896
chr13 111228065 111228083 ESR2 JASPAR yes 60360804
chr13 111228065 111228083 NR3C1 JASPAR yes 60360805
chr13 111228067 111228082 ESR2 JASPAR yes 19343897
chr13 111228067 111228082 ESR2 JASPAR yes 60360806
chr13 111228068 111228072 ESR1 TRANSFAC yes 19343898
chr13 111228068 111228072 ESR1 TRANSFAC yes 60360807
chr13 111228075 111228086 E2F4 JASPAR yes 19343899
chr13 111228075 111228086 E2F4 JASPAR yes 60360808
chr13 111228136 111228141 ETS2 TRANSFAC yes 19343900
chr13 111228136 111228141 ETS2 TRANSFAC yes 60360809
chr13 111228136 111228154 MAFF JASPAR yes 19343901
chr13 111228136 111228154 MAFF JASPAR yes 60360810
chr13 111228138 111228153 MAFK JASPAR yes 19343902
chr13 111228138 111228153 MAFK JASPAR yes 60360811
chr13 111228139 111228153 JUN JASPAR yes 19343903
chr13 111228139 111228153 JUN JASPAR yes 60360812
chr13 111228141 111228152 BATF JASPAR yes 19343904
chr13 111228141 111228152 BATF JASPAR yes 60360813
chr13 111228142 111228153 JUNB JASPAR yes 19343905
chr13 111228142 111228153 NFE2L2 JASPAR yes 19343906
chr13 111228142 111228153 JUNB JASPAR yes 60360814
chr13 111228142 111228153 NFE2L2 JASPAR yes 60360815
chr13 111228143 111228154 FOS JASPAR yes 19343907
chr13 111228143 111228154 FOSL1 JASPAR yes 19343908
chr13 111228143 111228154 JUND JASPAR yes 19343909
chr13 111228143 111228154 FOS JASPAR yes 60360816
chr13 111228143 111228154 FOSL1 JASPAR yes 60360817
chr13 111228143 111228154 JUND JASPAR yes 60360818
chr13 111228145 111228152 JUN TRANSFAC yes 19343910
chr13 111228145 111228152 JUN TRANSFAC yes 60360819
chr13 111228145 111228156 BATF JASPAR yes 19343911
chr13 111228145 111228156 BATF JASPAR yes 60360820
chr13 111228165 111228180 ESR2 JASPAR yes 19343912
chr13 111228165 111228180 ESR2 JASPAR yes 60360821
chr13 111228168 111228172 H1TF2 TRANSFAC yes 19343913
chr13 111228168 111228172 NFE TRANSFAC yes 19343914
chr13 111228168 111228172 SRF TRANSFAC yes 19343915
chr13 111228168 111228172 H1TF2 TRANSFAC yes 60360822
chr13 111228168 111228172 NFE TRANSFAC yes 60360823
chr13 111228168 111228172 SRF TRANSFAC yes 60360824
chr13 111228168 111228179 ESRRA JASPAR yes 19343916
chr13 111228168 111228179 ESRRA JASPAR yes 60360825
chr13 111228175 111228189 SPI1 JASPAR yes 19343917
chr13 111228175 111228189 SPI1 JASPAR yes 60360826
chr13 111228179 111228185 MZF1 JASPAR yes 19343918
chr13 111228179 111228185 MZF1 JASPAR yes 60360827
chr13 111228182 111228186 H1TF2 TRANSFAC yes 19343919
chr13 111228182 111228186 NFE TRANSFAC yes 19343920
chr13 111228182 111228186 SRF TRANSFAC yes 19343921
chr13 111228182 111228186 H1TF2 TRANSFAC yes 60360828
chr13 111228182 111228186 NFE TRANSFAC yes 60360829
chr13 111228182 111228186 SRF TRANSFAC yes 60360830
chr13 111228182 111228193 ESRRA JASPAR yes 19343922
chr13 111228182 111228193 ESRRA JASPAR yes 60360831
chr13 111228195 111228200 ATF1 TRANSFAC yes 19343923
chr13 111228195 111228200 ATF1 TRANSFAC yes 60360832
chr13 111228209 111228226 RXRA JASPAR yes 19343924
chr13 111228209 111228226 RXRA JASPAR yes 60360833
chr13 111228210 111228219 ZEB1 JASPAR yes 19343925
chr13 111228210 111228219 ZEB1 JASPAR yes 60360834
chr13 111228213 111228218 USF2 TRANSFAC yes 19343926
chr13 111228213 111228218 USF2 TRANSFAC yes 60360835
chr13 111228219 111228230 FLI1 JASPAR yes 19343927
chr13 111228219 111228230 FLI1 JASPAR yes 60360836
chr13 111228220 111228225 ETS2 TRANSFAC yes 19343928
chr13 111228220 111228225 ETS2 TRANSFAC yes 60360837
chr13 111228230 111228235 TFAP2A TRANSFAC yes 19343929
chr13 111228230 111228235 TFAP2A TRANSFAC yes 60360838
chr13 111228230 111228236 MZF1 JASPAR yes 19343930
chr13 111228230 111228236 MZF1 JASPAR yes 60360839
SNP sites on vista17068[chr13:111227983-111228269]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr13 111228013 rs144704690 C G
CTCF NR4A2 RUNX3
3396294
chr13 111228082 rs544534185 C A,T
E2F4 ESR2 NR3C1 RUNX3 SPI1
3396295
chr13 111228108 rs373781980 CG C
RUNX3 SPI1
3396296
chr13 111228178 rs141601767 C T
ESR2 ESRRA RUNX3 SPI1
3396297
chr13 111228197 rs144560924 C T
ATF1 RUNX3 SPI1
3396298
chr13 111228238 rs148021172 A G
RUNX3 SPI1
3396299
Genes possibly regulated by vista17068[chr13:111227983-111228269]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr13 111175417 111214080 - RAB20 ENSG00000139832.3 111214080 0.75 1.0 13021 86097
chr13 111267881 111292340 + CARKD ENSG00000213995.7 111267881 0.73 1.0 13022 60388
Expression level of Genes
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miRNAs possibly regulated by vista17068[chr13:111227983-111228269]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results