EnhancerDB
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  3. vista17078[chr13:111589420-111590157]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista17078[chr13:111589420-111590157]
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Tissue distribution of vista17078
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Transcription factor that possibly regulate vista17078[chr13:111589420-111590157]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr13 111589436 111589447 NFE2L2 JASPAR yes 19344230
chr13 111589476 111589489 SCRT2 JASPAR yes 19344231
chr13 111589482 111589492 TBX21 JASPAR yes 19344232
chr13 111589482 111589493 TBX20 JASPAR yes 19344233
chr13 111589482 111589493 TBX2 JASPAR yes 19344234
chr13 111589483 111589491 MGA JASPAR yes 19344235
chr13 111589483 111589491 TBX15 JASPAR yes 19344236
chr13 111589483 111589491 TBX1 JASPAR yes 19344237
chr13 111589483 111589491 TBX4 JASPAR yes 19344238
chr13 111589483 111589491 TBX5 JASPAR yes 19344239
chr13 111589489 111589510 ZNF263 JASPAR yes 19344240
chr13 111589497 111589503 GATA3 JASPAR yes 19344241
chr13 111589507 111589520 ZBTB18 JASPAR yes 19344242
chr13 111589520 111589524 NFE TRANSFAC yes 19344243
chr13 111589521 111589526 GATA2 JASPAR yes 19344244
chr13 111589527 111589542 HSF1 JASPAR yes 19344245
chr13 111589528 111589541 HSF4 JASPAR yes 19344246
chr13 111589555 111589574 PAX5 JASPAR yes 19344247
chr13 111589563 111589576 NR2F1 JASPAR yes 19344248
chr13 111589567 111589581 NR2F1 JASPAR yes 19344249
chr13 111589591 111589597 SOX10 JASPAR yes 19344250
chr13 111589613 111589623 RELA JASPAR yes 19344251
chr13 111589675 111589680 GATA2 JASPAR yes 19344252
chr13 111589675 111589689 STAT1 JASPAR yes 19344253
chr13 111589675 111589690 STAT2 JASPAR yes 19344254
chr13 111589675 111589693 IRF2 JASPAR yes 19344255
chr13 111589714 111589735 ZNF263 JASPAR yes 19344256
chr13 111589715 111589736 ZNF263 JASPAR yes 19344257
chr13 111589719 111589724 ETS2 TRANSFAC yes 19344258
chr13 111589738 111589759 ZNF263 JASPAR yes 19344259
chr13 111589741 111589762 ZNF263 JASPAR yes 19344260
chr13 111589742 111589748 ZNF354C JASPAR yes 19344261
chr13 111589751 111589757 ZNF354C JASPAR yes 19344262
chr13 111589753 111589767 CREB3 JASPAR yes 19344263
chr13 111589773 111589794 IRF1 JASPAR yes 19344264
chr13 111589777 111589783 TBP TRANSFAC yes 19344265
chr13 111589813 111589826 TFAP2B JASPAR yes 19344266
chr13 111589813 111589826 TFAP2C JASPAR yes 19344267
chr13 111589826 111589844 NR3C1 JASPAR yes 19344268
chr13 111589843 111589858 LEF1 JASPAR yes 19344269
chr13 111589857 111589872 PRDM1 JASPAR yes 19344270
chr13 111589862 111589868 TCF4 TRANSFAC yes 19344271
chr13 111589876 111589886 HOXC10 JASPAR yes 19344272
chr13 111589876 111589886 HOXD11 JASPAR yes 19344273
chr13 111589876 111589887 HOXC11 JASPAR yes 19344274
chr13 111589876 111589887 HOXD12 JASPAR yes 19344275
chr13 111589877 111589887 EMX1 JASPAR yes 19344276
chr13 111589877 111589887 MEOX2 JASPAR yes 19344277
chr13 111589878 111589886 NKX6-1 JASPAR yes 19344278
chr13 111589878 111589888 POU6F2 JASPAR yes 19344279
chr13 111589903 111589918 SCRT1 JASPAR yes 19344280
chr13 111589914 111589923 SNAI2 JASPAR yes 19344281
chr13 111589914 111589924 ID4 JASPAR yes 19344282
chr13 111589914 111589924 TCF3 JASPAR yes 19344283
chr13 111589914 111589924 TCF4 JASPAR yes 19344284
chr13 111589920 111589933 TFAP2A JASPAR yes 19344285
chr13 111589920 111589933 TFAP2B JASPAR yes 19344286
chr13 111589920 111589933 TFAP2C JASPAR yes 19344287
chr13 111589921 111589931 GABPA JASPAR yes 19344288
chr13 111589923 111589929 ETS1 JASPAR yes 19344289
chr13 111589923 111589929 SPI1 JASPAR yes 19344290
chr13 111589965 111589970 ATF1 TRANSFAC yes 19344291
chr13 111589989 111590001 TEAD1 JASPAR yes 19344292
chr13 111589991 111590001 TEAD1 JASPAR yes 19344293
chr13 111589991 111590001 TEAD4 JASPAR yes 19344294
chr13 111589992 111590000 TEAD3 JASPAR yes 19344295
chr13 111590002 111590017 ESR2 JASPAR yes 19344296
chr13 111590003 111590007 ESR1 TRANSFAC yes 19344297
chr13 111590004 111590014 TFAP4 JASPAR yes 19344298
chr13 111590040 111590052 HINFP JASPAR yes 19344299
chr13 111590041 111590055 ATF7 JASPAR yes 19344300
chr13 111590045 111590057 CREB1 JASPAR yes 19344301
chr13 111590046 111590051 ATF1 TRANSFAC yes 19344302
chr13 111590071 111590075 ESR1 TRANSFAC yes 19344303
chr13 111590096 111590101 ETS2 TRANSFAC yes 19344304
chr13 111590122 111590128 MYC TRANSFAC yes 19344305
chr13 111590127 111590130 MYB TRANSFAC yes 19344306
SNP sites on vista17078[chr13:111589420-111590157]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr13 111589486 rs117310338 G C
MGA SCRT2 TBX1 TBX15 TBX2 TBX20 TBX21 TBX4 TBX5
3398712
chr13 111589519 rs568693336 G A
ZBTB18
3398713
chr13 111589587 rs9522002 G C no 3398714
chr13 111589632 rs566236315 T C no 3398715
chr13 111589832 rs533694318 C G,T
NR3C1
3398716
chr13 111589902 rs185385595 A G,T no 3398717
chr13 111589929 rs181391180 G A
ETS1 GABPA SPI1 TFAP2A TFAP2B TFAP2C
3398718
chr13 111589943 rs564488677 C T no 3398719
chr13 111589967 rs191795369 G C
ATF1
3398720
chr13 111590010 rs147809410 C G
ESR2 TFAP4
3398721
chr13 111590028 rs8000674 A G no 3398722
chr13 111590039 rs560025374 C T no 3398723
chr13 111590042 rs533444856 C T
ATF7 HINFP
3398724
chr13 111590116 rs537399853 C T no 3398725
Genes possibly regulated by vista17078[chr13:111589420-111590157]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr13 111521578 111522162 - LINC00346 ENSG00000255874.1 111522162 0.76 1.0 13025 32742
chr13 111530887 111567416 - ANKRD10 ENSG00000088448.10 111567416 0.78 1.0 13026 77996
Expression level of Genes
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miRNAs possibly regulated by vista17078[chr13:111589420-111590157]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results