EnhancerDB
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  3. vista17079[chr13:111594578-111594832]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista17079[chr13:111594578-111594832]
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Tissue distribution of vista17079
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Transcription factor that possibly regulate vista17079[chr13:111594578-111594832]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr13 111594596 111594912 EBF1 UCSC Txn Factor no Conserved 108089943
chr13 111594697 111594927 RUNX3 UCSC Txn Factor no Conserved 108089951
chr13 111594571 111594592 IRF1 JASPAR yes 19344307
chr13 111594571 111594592 IRF1 JASPAR yes 60376432
chr13 111594575 111594590 PRDM1 JASPAR yes 19344308
chr13 111594575 111594590 STAT2 JASPAR yes 19344309
chr13 111594575 111594590 PRDM1 JASPAR yes 60376433
chr13 111594575 111594590 STAT2 JASPAR yes 60376434
chr13 111594576 111594588 IRF1 JASPAR yes 19344310
chr13 111594576 111594588 IRF1 JASPAR yes 60376435
chr13 111594577 111594598 IRF1 JASPAR yes 19344311
chr13 111594577 111594598 IRF1 JASPAR yes 60376436
chr13 111594580 111594586 TCF4 TRANSFAC yes 19344312
chr13 111594580 111594586 TCF4 TRANSFAC yes 60376437
chr13 111594587 111594600 POU2F2 JASPAR yes 19344313
chr13 111594587 111594600 POU2F2 JASPAR yes 60376438
chr13 111594587 111594601 POU1F1 JASPAR yes 19344314
chr13 111594587 111594601 POU1F1 JASPAR yes 60376439
chr13 111594588 111594600 POU3F2 JASPAR yes 19344315
chr13 111594588 111594600 POU3F2 JASPAR yes 60376440
chr13 111594588 111594601 POU3F3 JASPAR yes 19344316
chr13 111594588 111594601 POU3F3 JASPAR yes 60376441
chr13 111594589 111594601 POU2F1 JASPAR yes 19344317
chr13 111594589 111594601 POU2F1 JASPAR yes 60376442
chr13 111594597 111594601 YY1 TRANSFAC yes 19344318
chr13 111594597 111594601 YY1 TRANSFAC yes 60376443
chr13 111594626 111594632 MZF1 JASPAR yes 19344319
chr13 111594626 111594632 MZF1 JASPAR yes 60376444
chr13 111594638 111594646 GATA3 JASPAR yes 19344320
chr13 111594638 111594646 GATA5 JASPAR yes 19344321
chr13 111594638 111594646 GATA3 JASPAR yes 60376445
chr13 111594638 111594646 GATA5 JASPAR yes 60376446
chr13 111594680 111594686 MAZ TRANSFAC yes 19344322
chr13 111594680 111594686 MAZ TRANSFAC yes 60376447
chr13 111594691 111594696 SP1 TRANSFAC yes 19344323
chr13 111594691 111594696 SP1 TRANSFAC yes 60376448
chr13 111594698 111594708 ALX3 JASPAR yes 19344324
chr13 111594698 111594708 HESX1 JASPAR yes 19344325
chr13 111594698 111594708 ALX3 JASPAR yes 60376449
chr13 111594698 111594708 HESX1 JASPAR yes 60376450
chr13 111594699 111594712 DUXA JASPAR yes 19344326
chr13 111594699 111594712 DUXA JASPAR yes 60376451
chr13 111594700 111594711 DUX4 JASPAR yes 19344327
chr13 111594700 111594711 PHOX2A JASPAR yes 19344328
chr13 111594700 111594711 PROP1 JASPAR yes 19344329
chr13 111594700 111594711 DUX4 JASPAR yes 60376452
chr13 111594700 111594711 PHOX2A JASPAR yes 60376453
chr13 111594700 111594711 PROP1 JASPAR yes 60376454
chr13 111594702 111594707 MYB TRANSFAC yes 19344330
chr13 111594702 111594707 MYB TRANSFAC yes 60376455
chr13 111594704 111594710 JUN TRANSFAC yes 19344331
chr13 111594704 111594710 JUN TRANSFAC yes 60376456
chr13 111594710 111594730 PPARG JASPAR yes 19344332
chr13 111594710 111594730 PPARG JASPAR yes 60376457
chr13 111594714 111594718 LFA1 TRANSFAC yes 19344333
chr13 111594714 111594718 LFA1 TRANSFAC yes 60376458
chr13 111594752 111594766 EBF1 JASPAR yes 19344334
chr13 111594752 111594766 EBF1 JASPAR yes 60376459
chr13 111594753 111594764 EBF1 JASPAR yes 19344335
chr13 111594753 111594764 EBF1 JASPAR yes 60376460
chr13 111594753 111594768 ZBTB33 JASPAR yes 19344336
chr13 111594753 111594768 ZBTB33 JASPAR yes 60376461
chr13 111594762 111594773 NRL JASPAR yes 19344337
chr13 111594762 111594773 NRL JASPAR yes 60376462
chr13 111594766 111594780 ATF7 JASPAR yes 19344338
chr13 111594766 111594780 BATF3 JASPAR yes 19344339
chr13 111594766 111594780 ATF7 JASPAR yes 60376463
chr13 111594766 111594780 BATF3 JASPAR yes 60376464
chr13 111594767 111594779 JDP2 JASPAR yes 19344340
chr13 111594767 111594779 JDP2 JASPAR yes 60376465
chr13 111594779 111594792 NFKB1 JASPAR yes 19344341
chr13 111594779 111594792 NFKB2 JASPAR yes 19344342
chr13 111594779 111594792 NFKB1 JASPAR yes 60376466
chr13 111594779 111594792 NFKB2 JASPAR yes 60376467
chr13 111594779 111594800 IRF1 JASPAR yes 19344343
chr13 111594779 111594800 IRF1 JASPAR yes 60376468
chr13 111594780 111594790 NFKB1 JASPAR yes 19344344
chr13 111594780 111594790 RELA JASPAR yes 19344345
chr13 111594780 111594790 REL JASPAR yes 19344346
chr13 111594780 111594790 NFKB1 JASPAR yes 60376469
chr13 111594780 111594790 RELA JASPAR yes 60376470
chr13 111594780 111594790 REL JASPAR yes 60376471
chr13 111594780 111594791 NFKB1 JASPAR yes 19344347
chr13 111594780 111594791 NFKB1 JASPAR yes 60376472
chr13 111594781 111594796 PRDM1 JASPAR yes 19344348
chr13 111594781 111594796 PRDM1 JASPAR yes 60376473
chr13 111594785 111594806 ZNF263 JASPAR yes 19344349
chr13 111594785 111594806 ZNF263 JASPAR yes 60376474
chr13 111594787 111594802 PRDM1 JASPAR yes 19344350
chr13 111594787 111594802 PRDM1 JASPAR yes 60376475
chr13 111594793 111594804 BATF JASPAR yes 19344351
chr13 111594793 111594804 BATF JASPAR yes 60376476
chr13 111594817 111594836 PAX5 JASPAR yes 19344352
chr13 111594817 111594836 PAX5 JASPAR yes 60376477
chr13 111594822 111594842 TP63 JASPAR yes 19344353
chr13 111594822 111594842 TP63 JASPAR yes 60376478
SNP sites on vista17079[chr13:111594578-111594832]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr13 111594717 rs59383648 G C
EBF1 LFA1 PPARG RUNX3
3398745
chr13 111594720 rs201426146 GT G
EBF1 PPARG RUNX3
3398746
chr13 111594720 rs779712426 GT G
EBF1 PPARG RUNX3
3398747
chr13 111594760 rs115703575 T C
EBF1 RUNX3 ZBTB33
3398748
chr13 111594800 rs7335159 A G
BATF EBF1 IRF1 PRDM1 RUNX3 ZNF263
3398749
chr13 111594819 rs7336748 T C
EBF1 PAX5 RUNX3
3398750
chr13 111594824 rs7335325 A G
EBF1 PAX5 RUNX3 TP63
3398751
Genes possibly regulated by vista17079[chr13:111594578-111594832]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr13 111521578 111522162 - LINC00346 ENSG00000255874.1 111522162 0.76 1.0 13025 27584
chr13 111530887 111567416 - ANKRD10 ENSG00000088448.10 111567416 0.78 1.0 13026 72838
Expression level of Genes
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miRNAs possibly regulated by vista17079[chr13:111594578-111594832]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results