EnhancerDB
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  3. vista17085[chr13:111623981-111624100]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista17085[chr13:111623981-111624100]
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Tissue distribution of vista17085
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Transcription factor that possibly regulate vista17085[chr13:111623981-111624100]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr13 111623974 111623986 SRF JASPAR yes 19344492
chr13 111623974 111623986 SRF JASPAR yes 60380210
chr13 111623976 111623987 HOXC13 JASPAR yes 19344493
chr13 111623976 111623987 HOXC13 JASPAR yes 60380211
chr13 111623979 111623983 TEAD2 TRANSFAC yes 19344494
chr13 111623979 111623983 TEAD2 TRANSFAC yes 60380212
chr13 111623979 111623984 TBP TRANSFAC yes 19344495
chr13 111623979 111623984 TBP TRANSFAC yes 60380213
chr13 111623979 111623985 TFIID TRANSFAC yes 19344496
chr13 111623979 111623985 TFIID TRANSFAC yes 60380214
chr13 111623982 111623998 SOX8 JASPAR yes 19344497
chr13 111623982 111623998 SOX8 JASPAR yes 60380215
chr13 111623989 111623997 ISL2 JASPAR yes 19344498
chr13 111623989 111623997 ISL2 JASPAR yes 60380216
chr13 111623989 111623998 NKX3-2 JASPAR yes 19344499
chr13 111623989 111623998 NKX3-2 JASPAR yes 60380217
chr13 111624015 111624031 SOX8 JASPAR yes 19344500
chr13 111624015 111624031 SOX8 JASPAR yes 60380218
chr13 111624019 111624031 TEAD1 JASPAR yes 19344501
chr13 111624019 111624031 TEAD1 JASPAR yes 60380219
chr13 111624020 111624031 FOXH1 JASPAR yes 19344502
chr13 111624020 111624031 FOXH1 JASPAR yes 60380220
chr13 111624021 111624031 TEAD1 JASPAR yes 19344503
chr13 111624021 111624031 TEAD4 JASPAR yes 19344504
chr13 111624021 111624031 TEAD1 JASPAR yes 60380221
chr13 111624021 111624031 TEAD4 JASPAR yes 60380222
chr13 111624022 111624030 TEAD3 JASPAR yes 19344505
chr13 111624022 111624030 TEAD3 JASPAR yes 60380223
chr13 111624036 111624050 ATF7 JASPAR yes 19344506
chr13 111624036 111624050 BATF3 JASPAR yes 19344507
chr13 111624036 111624050 ATF7 JASPAR yes 60380224
chr13 111624036 111624050 BATF3 JASPAR yes 60380225
chr13 111624037 111624049 JDP2 JASPAR yes 19344508
chr13 111624037 111624049 JDP2 JASPAR yes 60380226
chr13 111624037 111624052 JUND JASPAR yes 19344509
chr13 111624037 111624052 JUND JASPAR yes 60380227
chr13 111624038 111624047 JUN TRANSFAC yes 19344510
chr13 111624038 111624047 JUN TRANSFAC yes 60380228
chr13 111624038 111624051 JUN JASPAR yes 19344511
chr13 111624038 111624051 JUN JASPAR yes 60380229
chr13 111624039 111624046 JUN TRANSFAC yes 19344512
chr13 111624039 111624046 JUN TRANSFAC yes 60380230
chr13 111624044 111624063 REST JASPAR yes 19344513
chr13 111624044 111624063 REST JASPAR yes 60380231
chr13 111624047 111624060 ELF1 JASPAR yes 19344514
chr13 111624047 111624060 ELF1 JASPAR yes 60380232
chr13 111624048 111624060 ELF4 JASPAR yes 19344515
chr13 111624048 111624060 ELF4 JASPAR yes 60380233
chr13 111624048 111624061 ELF3 JASPAR yes 19344516
chr13 111624048 111624061 ELF3 JASPAR yes 60380234
chr13 111624049 111624060 ELF5 JASPAR yes 19344517
chr13 111624049 111624060 ELF5 JASPAR yes 60380235
chr13 111624050 111624057 ETS1 TRANSFAC yes 19344518
chr13 111624050 111624057 ETS1 TRANSFAC yes 60380236
chr13 111624051 111624059 EHF JASPAR yes 19344519
chr13 111624051 111624059 EHF JASPAR yes 60380237
chr13 111624065 111624079 TLX1 JASPAR yes 19344520
chr13 111624065 111624079 TLX1 JASPAR yes 60380238
chr13 111624066 111624080 TLX1 JASPAR yes 19344521
chr13 111624066 111624080 TLX1 JASPAR yes 60380239
chr13 111624095 111624099 NFE TRANSFAC yes 19344522
chr13 111624095 111624099 NFE TRANSFAC yes 60380240
chr13 111624096 111624101 GATA2 JASPAR yes 19344523
chr13 111624096 111624101 GATA2 JASPAR yes 60380241
SNP sites on vista17085[chr13:111623981-111624100]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr13 111624002 rs117372431 G A no 3399225
chr13 111624051 rs9588317 C T
EHF ELF1 ELF3 ELF4 ELF5 ETS1 JUN JUND REST
3399226
chr13 111624063 rs139273312 C T
REST
3399227
Genes possibly regulated by vista17085[chr13:111623981-111624100]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr13 111530887 111567416 - ANKRD10 ENSG00000088448.10 111567416 0.78 1.0 13026 43435
Expression level of Genes
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miRNAs possibly regulated by vista17085[chr13:111623981-111624100]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results