EnhancerDB
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  3. vista171[chr1:6359789-6360186]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista171[chr1:6359789-6360186]
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Tissue distribution of vista171
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Transcription factor that possibly regulate vista171[chr1:6359789-6360186]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 6359799 6359814 RUNX2 JASPAR yes 26387675
chr1 6359799 6359814 RUNX2 JASPAR yes 118221403
chr1 6359833 6359844 HOXC13 JASPAR yes 26387676
chr1 6359833 6359844 HOXC13 JASPAR yes 118221404
chr1 6359854 6359864 RUNX3 JASPAR yes 26387677
chr1 6359854 6359864 RUNX3 JASPAR yes 118221405
chr1 6359859 6359871 TAL1 JASPAR yes 26387678
chr1 6359859 6359871 TAL1 JASPAR yes 118221406
chr1 6359860 6359873 ZBTB18 JASPAR yes 26387679
chr1 6359860 6359873 ZBTB18 JASPAR yes 118221407
chr1 6359861 6359871 FIGLA JASPAR yes 26387680
chr1 6359861 6359871 MSC JASPAR yes 26387681
chr1 6359861 6359871 TFAP4 JASPAR yes 26387682
chr1 6359861 6359871 FIGLA JASPAR yes 118221408
chr1 6359861 6359871 MSC JASPAR yes 118221409
chr1 6359861 6359871 TFAP4 JASPAR yes 118221410
chr1 6359861 6359873 TAL1 JASPAR yes 26387683
chr1 6359861 6359873 TAL1 JASPAR yes 118221411
chr1 6359876 6359880 H4TF2 TRANSFAC yes 26387684
chr1 6359876 6359880 H4TF2 TRANSFAC yes 118221412
chr1 6359900 6359909 SNAI2 JASPAR yes 26387685
chr1 6359900 6359909 SNAI2 JASPAR yes 118221413
chr1 6359900 6359910 FIGLA JASPAR yes 26387686
chr1 6359900 6359910 ID4 JASPAR yes 26387687
chr1 6359900 6359910 TCF3 JASPAR yes 26387688
chr1 6359900 6359910 TCF4 JASPAR yes 26387689
chr1 6359900 6359910 FIGLA JASPAR yes 118221414
chr1 6359900 6359910 ID4 JASPAR yes 118221415
chr1 6359900 6359910 TCF3 JASPAR yes 118221416
chr1 6359900 6359910 TCF4 JASPAR yes 118221417
chr1 6359902 6359911 ZEB1 JASPAR yes 26387690
chr1 6359902 6359911 ZEB1 JASPAR yes 118221418
chr1 6359914 6359924 RELA JASPAR yes 26387691
chr1 6359914 6359924 RELA JASPAR yes 118221419
chr1 6359923 6359933 REL JASPAR yes 26387692
chr1 6359923 6359933 REL JASPAR yes 118221420
chr1 6359923 6359934 NFKB1 JASPAR yes 26387693
chr1 6359923 6359934 NFKB1 JASPAR yes 118221421
chr1 6359926 6359930 YY1 TRANSFAC yes 26387694
chr1 6359926 6359930 YY1 TRANSFAC yes 118221422
chr1 6359928 6359940 E2F8 JASPAR yes 26387695
chr1 6359928 6359940 E2F8 JASPAR yes 118221423
chr1 6359929 6359945 ZNF143 JASPAR yes 26387696
chr1 6359929 6359945 ZNF143 JASPAR yes 118221424
chr1 6359954 6359963 TFAP2A JASPAR yes 26387697
chr1 6359954 6359963 TFAP2A JASPAR yes 118221425
chr1 6359959 6359963 LFA1 TRANSFAC yes 26387698
chr1 6359959 6359963 LFA1 TRANSFAC yes 118221426
chr1 6359977 6359981 NFE TRANSFAC yes 26387699
chr1 6359977 6359981 NFE TRANSFAC yes 118221427
chr1 6359987 6359991 H1TF2 TRANSFAC yes 26387700
chr1 6359987 6359991 NFE TRANSFAC yes 26387701
chr1 6359987 6359991 SRF TRANSFAC yes 26387702
chr1 6359987 6359991 H1TF2 TRANSFAC yes 118221428
chr1 6359987 6359991 NFE TRANSFAC yes 118221429
chr1 6359987 6359991 SRF TRANSFAC yes 118221430
chr1 6359993 6359998 SP1 TRANSFAC yes 26387703
chr1 6359993 6359998 SP1 TRANSFAC yes 118221431
chr1 6360001 6360013 NHLH1 JASPAR yes 26387704
chr1 6360001 6360013 NHLH1 JASPAR yes 118221432
chr1 6360010 6360014 YY1 TRANSFAC yes 26387705
chr1 6360010 6360014 YY1 TRANSFAC yes 118221433
chr1 6360020 6360031 NRL JASPAR yes 26387706
chr1 6360020 6360031 NRL JASPAR yes 118221434
chr1 6360031 6360035 YY1 TRANSFAC yes 26387707
chr1 6360031 6360035 YY1 TRANSFAC yes 118221435
chr1 6360043 6360055 YY1 JASPAR yes 26387708
chr1 6360043 6360055 YY1 JASPAR yes 118221436
chr1 6360059 6360073 BATF3 JASPAR yes 26387709
chr1 6360059 6360073 BATF3 JASPAR yes 118221437
chr1 6360070 6360082 NHLH1 JASPAR yes 26387710
chr1 6360070 6360082 NHLH1 JASPAR yes 118221438
chr1 6360071 6360081 MSC JASPAR yes 26387711
chr1 6360071 6360081 NHLH1 JASPAR yes 26387712
chr1 6360071 6360081 TFAP4 JASPAR yes 26387713
chr1 6360071 6360081 MSC JASPAR yes 118221439
chr1 6360071 6360081 NHLH1 JASPAR yes 118221440
chr1 6360071 6360081 TFAP4 JASPAR yes 118221441
chr1 6360088 6360109 MAFG JASPAR yes 26387714
chr1 6360088 6360109 MAFG JASPAR yes 118221442
chr1 6360094 6360105 NFE2L2 JASPAR yes 26387715
chr1 6360094 6360105 NFE2L2 JASPAR yes 118221443
chr1 6360129 6360134 TFAP2A TRANSFAC yes 26387716
chr1 6360129 6360134 TFAP2A TRANSFAC yes 118221444
chr1 6360129 6360135 MZF1 JASPAR yes 26387717
chr1 6360129 6360135 MZF1 JASPAR yes 118221445
chr1 6360140 6360149 SRY JASPAR yes 26387718
chr1 6360140 6360149 SRY JASPAR yes 118221446
chr1 6360145 6360148 MYB TRANSFAC yes 26387719
chr1 6360145 6360148 MYB TRANSFAC yes 118221447
chr1 6360160 6360174 GATA2 JASPAR yes 26387720
chr1 6360160 6360174 GATA2 JASPAR yes 118221448
chr1 6360183 6360195 SRF JASPAR yes 26387721
chr1 6360183 6360195 SRF JASPAR yes 118221449
chr1 6360183 6360195 SRF JASPAR yes 118221450
SNP sites on vista171[chr1:6359789-6360186]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 6359908 rs138829135 G A
FIGLA ID4 SNAI2 TCF3 TCF4 ZEB1
37752
chr1 6359969 rs549779246 A C no 37753
chr1 6359997 rs113594183 G T
SP1
37754
chr1 6360017 rs189702807 C A no 37755
chr1 6360026 rs572124995 G A
NRL
37756
chr1 6360147 rs17361670 A T
MYB SRY
37757
chr1 6360157 rs17029366 T C no 37758
chr1 6360186 rs142026737 A G
SRF
37759
Genes possibly regulated by vista171[chr1:6359789-6360186]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 6241329 6269449 - RPL22 ENSG00000116251.5 6269449 0.66 0.99 91 9660
chr1 6265535 6281359 + RNF207 ENSG00000158286.8 6265535 0.84 1.0 92 5746
chr1 6281253 6296032 - ICMT ENSG00000116237.11 6296032 0.61 1.0 93 36243
chr1 6304252 6305638 + HES3 ENSG00000173673.7 6304252 1.0 0.0 94 44463
chr1 6307406 6321035 - GPR153 ENSG00000158292.6 6321035 0.72 0.99 95 61246
chr1 6324329 6454451 - ACOT7 ENSG00000097021.15 6454451 0.94 1.0 96 5735
Expression level of Genes
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miRNAs possibly regulated by vista171[chr1:6359789-6360186]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results