EnhancerDB
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  3. vista172[chr1:6360191-6360625]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista172[chr1:6360191-6360625]
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Tissue distribution of vista172
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Transcription factor that possibly regulate vista172[chr1:6360191-6360625]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 6360183 6360195 SRF JASPAR yes 26387721
chr1 6360183 6360195 SRF JASPAR yes 118221449
chr1 6360183 6360195 SRF JASPAR yes 118221450
chr1 6360193 6360201 EHF JASPAR yes 26387722
chr1 6360193 6360201 EHF JASPAR yes 118221451
chr1 6360197 6360208 EBF1 JASPAR yes 26387723
chr1 6360197 6360208 EBF1 JASPAR yes 118221452
chr1 6360216 6360222 YY1 JASPAR yes 26387724
chr1 6360216 6360222 YY1 JASPAR yes 118221453
chr1 6360225 6360244 REST JASPAR yes 26387725
chr1 6360225 6360244 REST JASPAR yes 118221454
chr1 6360236 6360240 H4TF2 TRANSFAC yes 26387726
chr1 6360236 6360240 H4TF2 TRANSFAC yes 118221455
chr1 6360239 6360254 RFX5 JASPAR yes 26387727
chr1 6360239 6360254 RFX5 JASPAR yes 118221456
chr1 6360279 6360284 ETS2 TRANSFAC yes 26387728
chr1 6360279 6360284 ETS2 TRANSFAC yes 118221457
chr1 6360279 6360287 EHF JASPAR yes 26387729
chr1 6360279 6360287 EHF JASPAR yes 118221458
chr1 6360303 6360324 REST JASPAR yes 26387730
chr1 6360303 6360324 REST JASPAR yes 118221459
chr1 6360304 6360323 REST JASPAR yes 26387731
chr1 6360304 6360323 REST JASPAR yes 118221460
chr1 6360317 6360327 MAX JASPAR yes 26387732
chr1 6360317 6360327 MAX JASPAR yes 118221461
chr1 6360333 6360337 H4TF2 TRANSFAC yes 26387733
chr1 6360333 6360337 H4TF2 TRANSFAC yes 118221462
chr1 6360349 6360354 SP1 TRANSFAC yes 26387734
chr1 6360349 6360354 SP1 TRANSFAC yes 118221463
chr1 6360368 6360377 THAP1 JASPAR yes 26387735
chr1 6360368 6360377 THAP1 JASPAR yes 118221464
chr1 6360371 6360375 LFA1 TRANSFAC yes 26387736
chr1 6360371 6360375 LFA1 TRANSFAC yes 118221465
chr1 6360392 6360397 ETS2 TRANSFAC yes 26387737
chr1 6360392 6360397 ETS2 TRANSFAC yes 118221466
chr1 6360397 6360412 RFX5 JASPAR yes 26387738
chr1 6360397 6360412 RFX5 JASPAR yes 118221467
chr1 6360399 6360412 SMAD2 JASPAR yes 26387739
chr1 6360399 6360412 SMAD2 JASPAR yes 118221468
chr1 6360404 6360424 TP53 JASPAR yes 26387740
chr1 6360404 6360424 TP53 JASPAR yes 118221469
chr1 6360406 6360426 TP63 JASPAR yes 26387741
chr1 6360406 6360426 TP63 JASPAR yes 118221470
chr1 6360407 6360425 TP53 JASPAR yes 26387742
chr1 6360407 6360425 TP63 JASPAR yes 26387743
chr1 6360407 6360425 TP73 JASPAR yes 26387744
chr1 6360407 6360425 TP53 JASPAR yes 118221471
chr1 6360407 6360425 TP63 JASPAR yes 118221472
chr1 6360407 6360425 TP73 JASPAR yes 118221473
chr1 6360425 6360439 SPI1 JASPAR yes 26387745
chr1 6360425 6360439 SPI1 JASPAR yes 118221474
chr1 6360429 6360436 SPIB JASPAR yes 26387746
chr1 6360429 6360436 SPIB JASPAR yes 118221475
chr1 6360442 6360448 TCF4 TRANSFAC yes 26387747
chr1 6360442 6360448 TCF4 TRANSFAC yes 118221476
chr1 6360442 6360453 NFE2L2 JASPAR yes 26387748
chr1 6360442 6360453 NFE2L2 JASPAR yes 118221477
chr1 6360464 6360479 HNF4A JASPAR yes 26387749
chr1 6360464 6360479 HNF4A JASPAR yes 118221478
chr1 6360469 6360475 SOX10 JASPAR yes 26387750
chr1 6360469 6360475 SOX10 JASPAR yes 118221479
chr1 6360495 6360509 JUN JASPAR yes 26387751
chr1 6360495 6360509 JUN JASPAR yes 118221480
chr1 6360498 6360509 FOSL2 JASPAR yes 26387752
chr1 6360498 6360509 JUNB JASPAR yes 26387753
chr1 6360498 6360509 FOSL2 JASPAR yes 118221481
chr1 6360498 6360509 JUNB JASPAR yes 118221482
chr1 6360499 6360510 FOS JASPAR yes 26387754
chr1 6360499 6360510 FOSL1 JASPAR yes 26387755
chr1 6360499 6360510 JUND JASPAR yes 26387756
chr1 6360499 6360510 NFE2 JASPAR yes 26387757
chr1 6360499 6360510 FOS JASPAR yes 118221483
chr1 6360499 6360510 FOSL1 JASPAR yes 118221484
chr1 6360499 6360510 JUND JASPAR yes 118221485
chr1 6360499 6360510 NFE2 JASPAR yes 118221486
chr1 6360500 6360509 JDP2 JASPAR yes 26387758
chr1 6360500 6360509 JDP2 JASPAR yes 118221487
chr1 6360500 6360511 FOSL2 JASPAR yes 26387759
chr1 6360500 6360511 JUNB JASPAR yes 26387760
chr1 6360500 6360511 FOSL2 JASPAR yes 118221488
chr1 6360500 6360511 JUNB JASPAR yes 118221489
chr1 6360500 6360514 JUN JASPAR yes 26387761
chr1 6360500 6360514 JUN JASPAR yes 118221490
chr1 6360505 6360518 ZBTB18 JASPAR yes 26387762
chr1 6360505 6360518 ZBTB18 JASPAR yes 118221491
chr1 6360506 6360516 MSC JASPAR yes 26387763
chr1 6360506 6360516 MSC JASPAR yes 118221492
chr1 6360512 6360527 NR2C2 JASPAR yes 26387764
chr1 6360512 6360527 NR2C2 JASPAR yes 118221493
chr1 6360515 6360521 SP1 TRANSFAC yes 26387765
chr1 6360515 6360521 SP1 TRANSFAC yes 118221494
chr1 6360515 6360525 SP1 JASPAR yes 26387766
chr1 6360515 6360525 SP1 TRANSFAC yes 26387767
chr1 6360515 6360525 SP1 JASPAR yes 118221495
chr1 6360515 6360525 SP1 TRANSFAC yes 118221496
chr1 6360537 6360547 RELA JASPAR yes 26387768
chr1 6360537 6360547 RELA JASPAR yes 118221497
chr1 6360549 6360563 GLIS2 JASPAR yes 26387769
chr1 6360549 6360563 GLIS2 JASPAR yes 118221498
chr1 6360592 6360598 HiNF-A TRANSFAC yes 26387770
chr1 6360592 6360598 HiNF-A TRANSFAC yes 118221499
chr1 6360610 6360624 GLIS2 JASPAR yes 26387771
chr1 6360610 6360624 GLIS2 JASPAR yes 118221500
SNP sites on vista172[chr1:6360191-6360625]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 6360309 rs559469753 G A
REST
37761
chr1 6360324 rs78547761 A G
MAX REST
37762
chr1 6360344 rs116555265 C A no 37763
chr1 6360504 rs4908876 A T
FOS FOSL1 FOSL2 JDP2 JUN JUNB JUND NFE2
37764
chr1 6360560 rs188311484 G A
GLIS2
37765
Genes possibly regulated by vista172[chr1:6360191-6360625]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 6241329 6269449 - RPL22 ENSG00000116251.5 6269449 0.66 0.99 91 9258
chr1 6265535 6281359 + RNF207 ENSG00000158286.8 6265535 0.84 1.0 92 5344
chr1 6281253 6296032 - ICMT ENSG00000116237.11 6296032 0.61 1.0 93 35841
chr1 6304252 6305638 + HES3 ENSG00000173673.7 6304252 1.0 0.0 94 44061
chr1 6307406 6321035 - GPR153 ENSG00000158292.6 6321035 0.72 0.99 95 60844
chr1 6324329 6454451 - ACOT7 ENSG00000097021.15 6454451 0.94 1.0 96 6174
Expression level of Genes
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miRNAs possibly regulated by vista172[chr1:6360191-6360625]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results