EnhancerDB
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  3. vista173[chr1:6362597-6362955]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista173[chr1:6362597-6362955]
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Tissue distribution of vista173
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Transcription factor that possibly regulate vista173[chr1:6362597-6362955]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 6362595 6362610 FOXP1 JASPAR yes 26387994
chr1 6362595 6362610 FOXP1 JASPAR yes 118221501
chr1 6362596 6362607 FOXP2 JASPAR yes 26387995
chr1 6362596 6362607 FOXP2 JASPAR yes 118221502
chr1 6362598 6362606 FOXO3 JASPAR yes 26387996
chr1 6362598 6362606 FOXO3 JASPAR yes 118221503
chr1 6362610 6362626 SOX8 JASPAR yes 26387997
chr1 6362610 6362626 SOX8 JASPAR yes 118221504
chr1 6362627 6362634 POU2F1 TRANSFAC yes 26387998
chr1 6362627 6362634 POU2F1 TRANSFAC yes 118221505
chr1 6362671 6362681 TFAP4 JASPAR yes 26387999
chr1 6362671 6362681 TFAP4 JASPAR yes 118221506
chr1 6362674 6362693 CTCF JASPAR yes 26388000
chr1 6362674 6362693 CTCF JASPAR yes 118221507
chr1 6362695 6362706 E2F6 JASPAR yes 26388001
chr1 6362695 6362706 E2F6 JASPAR yes 118221508
chr1 6362698 6362713 PRDM1 JASPAR yes 26388002
chr1 6362698 6362713 STAT2 JASPAR yes 26388003
chr1 6362698 6362713 PRDM1 JASPAR yes 118221509
chr1 6362698 6362713 STAT2 JASPAR yes 118221510
chr1 6362699 6362704 ETS2 TRANSFAC yes 26388004
chr1 6362699 6362704 ETS2 TRANSFAC yes 118221511
chr1 6362702 6362707 ETS2 TRANSFAC yes 26388005
chr1 6362702 6362707 ETS2 TRANSFAC yes 118221512
chr1 6362705 6362720 JUND JASPAR yes 26388006
chr1 6362705 6362720 JUND JASPAR yes 118221513
chr1 6362706 6362719 JUN JASPAR yes 26388007
chr1 6362706 6362719 JUN JASPAR yes 118221514
chr1 6362708 6362723 JUND JASPAR yes 26388008
chr1 6362708 6362723 JUND JASPAR yes 118221515
chr1 6362712 6362723 CDX2 JASPAR yes 26388009
chr1 6362712 6362723 CDX2 JASPAR yes 118221516
chr1 6362713 6362724 HOXA10 JASPAR yes 26388010
chr1 6362713 6362724 HOXC11 JASPAR yes 26388011
chr1 6362713 6362724 HOXC13 JASPAR yes 26388012
chr1 6362713 6362724 HOXA10 JASPAR yes 118221517
chr1 6362713 6362724 HOXC11 JASPAR yes 118221518
chr1 6362713 6362724 HOXC13 JASPAR yes 118221519
chr1 6362714 6362723 CDX1 JASPAR yes 26388013
chr1 6362714 6362723 CDX1 JASPAR yes 118221520
chr1 6362714 6362724 HOXA13 JASPAR yes 26388014
chr1 6362714 6362724 HOXB13 JASPAR yes 26388015
chr1 6362714 6362724 HOXC10 JASPAR yes 26388016
chr1 6362714 6362724 HOXD11 JASPAR yes 26388017
chr1 6362714 6362724 HOXD13 JASPAR yes 26388018
chr1 6362714 6362724 HOXA13 JASPAR yes 118221521
chr1 6362714 6362724 HOXB13 JASPAR yes 118221522
chr1 6362714 6362724 HOXC10 JASPAR yes 118221523
chr1 6362714 6362724 HOXD11 JASPAR yes 118221524
chr1 6362714 6362724 HOXD13 JASPAR yes 118221525
chr1 6362738 6362748 MYF6 JASPAR yes 26388019
chr1 6362738 6362748 MYF6 JASPAR yes 118221526
chr1 6362777 6362797 TP53 JASPAR yes 26388020
chr1 6362777 6362797 TP53 JASPAR yes 118221527
chr1 6362782 6362791 HIC2 JASPAR yes 26388021
chr1 6362782 6362791 HIC2 JASPAR yes 118221528
chr1 6362785 6362789 LFA1 TRANSFAC yes 26388022
chr1 6362785 6362789 LFA1 TRANSFAC yes 118221529
chr1 6362786 6362797 SPDEF JASPAR yes 26388023
chr1 6362786 6362797 SPDEF JASPAR yes 118221530
chr1 6362799 6362813 TLX1 JASPAR yes 26388024
chr1 6362799 6362813 TLX1 JASPAR yes 118221531
chr1 6362800 6362814 TLX1 JASPAR yes 26388025
chr1 6362800 6362814 TLX1 JASPAR yes 118221532
chr1 6362806 6362815 NFIX JASPAR yes 26388026
chr1 6362806 6362815 NFIX JASPAR yes 118221533
chr1 6362806 6362816 NFIA JASPAR yes 26388027
chr1 6362806 6362816 NFIA JASPAR yes 118221534
chr1 6362808 6362814 NFIC JASPAR yes 26388028
chr1 6362808 6362814 NFIC JASPAR yes 118221535
chr1 6362819 6362833 TLX1 JASPAR yes 26388029
chr1 6362819 6362833 TLX1 JASPAR yes 118221536
chr1 6362842 6362857 JUND JASPAR yes 26388030
chr1 6362842 6362857 JUND JASPAR yes 118221537
chr1 6362843 6362856 JUN JASPAR yes 26388031
chr1 6362843 6362856 JUN JASPAR yes 118221538
chr1 6362845 6362855 RORA JASPAR yes 26388032
chr1 6362845 6362855 RORA JASPAR yes 118221539
chr1 6362846 6362859 NR2F1 JASPAR yes 26388033
chr1 6362846 6362859 NR2F1 JASPAR yes 118221540
chr1 6362847 6362855 CREB1 JASPAR yes 26388034
chr1 6362847 6362855 CREB1 JASPAR yes 118221541
chr1 6362847 6362865 ESR2 JASPAR yes 26388035
chr1 6362847 6362865 ESR2 JASPAR yes 118221542
chr1 6362848 6362866 RARA JASPAR yes 26388036
chr1 6362848 6362866 RARA JASPAR yes 118221543
chr1 6362849 6362864 ESR2 JASPAR yes 26388037
chr1 6362849 6362864 ESR2 JASPAR yes 118221544
chr1 6362849 6362869 ESR1 JASPAR yes 26388038
chr1 6362849 6362869 ESR1 JASPAR yes 118221545
chr1 6362850 6362854 ESR1 TRANSFAC yes 26388039
chr1 6362850 6362854 ESR1 TRANSFAC yes 118221546
chr1 6362850 6362861 USF1 JASPAR yes 26388040
chr1 6362850 6362861 USF1 JASPAR yes 118221547
chr1 6362858 6362862 H4TF2 TRANSFAC yes 26388041
chr1 6362858 6362862 H4TF2 TRANSFAC yes 118221548
chr1 6362867 6362882 JUND JASPAR yes 26388042
chr1 6362867 6362882 JUND JASPAR yes 118221549
chr1 6362870 6362885 JUND JASPAR yes 26388043
chr1 6362870 6362885 JUND JASPAR yes 118221550
chr1 6362871 6362884 JUN JASPAR yes 26388044
chr1 6362871 6362884 JUN JASPAR yes 118221551
chr1 6362878 6362882 YY1 TRANSFAC yes 26388045
chr1 6362878 6362882 YY1 TRANSFAC yes 118221552
chr1 6362885 6362899 CREB3L1 JASPAR yes 26388046
chr1 6362885 6362899 CREB3L1 JASPAR yes 118221553
chr1 6362886 6362896 MAX JASPAR yes 26388047
chr1 6362886 6362896 MAX JASPAR yes 118221554
chr1 6362886 6362897 USF1 JASPAR yes 26388048
chr1 6362886 6362897 USF2 JASPAR yes 26388049
chr1 6362886 6362897 USF1 JASPAR yes 118221555
chr1 6362886 6362897 USF2 JASPAR yes 118221556
chr1 6362886 6362898 HES5 JASPAR yes 26388050
chr1 6362886 6362898 HES7 JASPAR yes 26388051
chr1 6362886 6362898 HES5 JASPAR yes 118221557
chr1 6362886 6362898 HES7 JASPAR yes 118221558
chr1 6362887 6362897 BHLHE40 JASPAR yes 26388052
chr1 6362887 6362897 HEY1 JASPAR yes 26388053
chr1 6362887 6362897 HEY2 JASPAR yes 26388054
chr1 6362887 6362897 MAX JASPAR yes 26388055
chr1 6362887 6362897 MLX JASPAR yes 26388056
chr1 6362887 6362897 MNT JASPAR yes 26388057
chr1 6362887 6362897 TFE3 JASPAR yes 26388058
chr1 6362887 6362897 TFEB JASPAR yes 26388059
chr1 6362887 6362897 BHLHE40 JASPAR yes 118221559
chr1 6362887 6362897 HEY1 JASPAR yes 118221560
chr1 6362887 6362897 HEY2 JASPAR yes 118221561
chr1 6362887 6362897 MAX JASPAR yes 118221562
chr1 6362887 6362897 MLX JASPAR yes 118221563
chr1 6362887 6362897 MNT JASPAR yes 118221564
chr1 6362887 6362897 TFE3 JASPAR yes 118221565
chr1 6362887 6362897 TFEB JASPAR yes 118221566
chr1 6362887 6362898 USF2 JASPAR yes 26388060
chr1 6362887 6362898 USF2 JASPAR yes 118221567
chr1 6362888 6362895 USF1 JASPAR yes 26388061
chr1 6362888 6362895 USF1 JASPAR yes 118221568
chr1 6362888 6362898 MAX JASPAR yes 26388062
chr1 6362888 6362898 MAX JASPAR yes 118221569
chr1 6362889 6362894 MYC TRANSFAC yes 26388063
chr1 6362889 6362894 USF1 TRANSFAC yes 26388064
chr1 6362889 6362894 USF2 TRANSFAC yes 26388065
chr1 6362889 6362894 MYC TRANSFAC yes 118221570
chr1 6362889 6362894 USF1 TRANSFAC yes 118221571
chr1 6362889 6362894 USF2 TRANSFAC yes 118221572
chr1 6362921 6362933 GLI2 JASPAR yes 26388066
chr1 6362921 6362933 GLI2 JASPAR yes 118221573
chr1 6362944 6362952 MEIS2 JASPAR yes 26388067
chr1 6362944 6362952 MEIS3 JASPAR yes 26388068
chr1 6362944 6362952 MEIS2 JASPAR yes 118221574
chr1 6362944 6362952 MEIS3 JASPAR yes 118221575
SNP sites on vista173[chr1:6362597-6362955]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 6362626 rs7540503 C T
SOX8
37806
chr1 6362772 rs528166105 C T no 37807
chr1 6362863 rs7540774 C T
ESR1 ESR2 RARA
37808
chr1 6362879 rs77059271 C A
JUN JUND YY1
37809
chr1 6362903 rs533409968 T A no 37810
Genes possibly regulated by vista173[chr1:6362597-6362955]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 6241329 6269449 - RPL22 ENSG00000116251.5 6269449 0.66 0.99 91 6852
chr1 6265535 6281359 + RNF207 ENSG00000158286.8 6265535 0.84 1.0 92 2938
chr1 6281253 6296032 - ICMT ENSG00000116237.11 6296032 0.61 1.0 93 33435
chr1 6304252 6305638 + HES3 ENSG00000173673.7 6304252 1.0 0.0 94 41655
chr1 6307406 6321035 - GPR153 ENSG00000158292.6 6321035 0.72 0.99 95 58438
chr1 6324329 6454451 - ACOT7 ENSG00000097021.15 6454451 0.94 1.0 96 8504
Expression level of Genes
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miRNAs possibly regulated by vista173[chr1:6362597-6362955]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results