EnhancerDB
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  3. vista1736[chr1:57988271-57988573]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1736[chr1:57988271-57988573]
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Tissue distribution of vista1736
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Transcription factor that possibly regulate vista1736[chr1:57988271-57988573]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 57988267 57988275 FOXG1 JASPAR yes 29187930
chr1 57988267 57988275 FOXG1 JASPAR yes 118296371
chr1 57988268 57988278 HOXA13 JASPAR yes 29187931
chr1 57988268 57988278 HOXB13 JASPAR yes 29187932
chr1 57988268 57988278 HOXD13 JASPAR yes 29187933
chr1 57988268 57988278 HOXA13 JASPAR yes 118296372
chr1 57988268 57988278 HOXB13 JASPAR yes 118296373
chr1 57988268 57988278 HOXD13 JASPAR yes 118296374
chr1 57988269 57988280 CDX2 JASPAR yes 29187934
chr1 57988269 57988280 CDX2 JASPAR yes 118296375
chr1 57988285 57988291 GATA1 TRANSFAC yes 29187935
chr1 57988285 57988291 GATA1 TRANSFAC yes 118296376
chr1 57988285 57988293 GATA5 JASPAR yes 29187936
chr1 57988285 57988293 GATA5 JASPAR yes 118296377
chr1 57988310 57988313 MYB TRANSFAC yes 29187937
chr1 57988310 57988313 MYB TRANSFAC yes 118296378
chr1 57988327 57988340 DUXA JASPAR yes 29187938
chr1 57988327 57988340 DUXA JASPAR yes 118296379
chr1 57988328 57988339 DUX4 JASPAR yes 29187939
chr1 57988328 57988339 DUX4 JASPAR yes 118296380
chr1 57988329 57988334 NFY TRANSFAC yes 29187940
chr1 57988329 57988334 NFY TRANSFAC yes 118296381
chr1 57988335 57988340 MYB TRANSFAC yes 29187941
chr1 57988335 57988340 MYB TRANSFAC yes 118296382
chr1 57988343 57988361 NR3C1 JASPAR yes 29187942
chr1 57988343 57988361 NR3C1 JASPAR yes 118296383
chr1 57988344 57988350 TCF4 TRANSFAC yes 29187943
chr1 57988344 57988350 TCF4 TRANSFAC yes 118296384
chr1 57988373 57988392 RFX2 JASPAR yes 29187944
chr1 57988373 57988392 RFX2 JASPAR yes 118296385
chr1 57988378 57988387 NFIX JASPAR yes 29187945
chr1 57988378 57988387 NFIX JASPAR yes 118296386
chr1 57988380 57988386 NFIC JASPAR yes 29187946
chr1 57988380 57988386 NFIC JASPAR yes 118296387
chr1 57988389 57988401 POU3F1 JASPAR yes 29187947
chr1 57988389 57988401 POU3F2 JASPAR yes 29187948
chr1 57988389 57988401 POU3F1 JASPAR yes 118296388
chr1 57988389 57988401 POU3F2 JASPAR yes 118296389
chr1 57988393 57988396 MYB TRANSFAC yes 29187949
chr1 57988393 57988396 MYB TRANSFAC yes 118296390
chr1 57988396 57988400 YY1 TRANSFAC yes 29187950
chr1 57988396 57988400 YY1 TRANSFAC yes 118296391
chr1 57988400 57988407 JUN TRANSFAC yes 29187951
chr1 57988400 57988407 JUN TRANSFAC yes 118296392
chr1 57988411 57988431 PPARG JASPAR yes 29187952
chr1 57988411 57988431 PPARG JASPAR yes 118296393
chr1 57988425 57988435 SP1 JASPAR yes 29187953
chr1 57988425 57988435 SP1 JASPAR yes 118296394
chr1 57988449 57988453 NFE TRANSFAC yes 29187954
chr1 57988449 57988453 NFE TRANSFAC yes 118296395
chr1 57988449 57988454 GATA1 TRANSFAC yes 29187955
chr1 57988449 57988454 GATA1 TRANSFAC yes 118296396
chr1 57988449 57988455 GATA3 JASPAR yes 29187956
chr1 57988449 57988455 GATA3 JASPAR yes 118296397
chr1 57988456 57988466 TFAP4 JASPAR yes 29187957
chr1 57988456 57988466 TFAP4 JASPAR yes 118296398
chr1 57988465 57988479 PAX6 JASPAR yes 29187958
chr1 57988465 57988479 PAX6 JASPAR yes 118296399
chr1 57988488 57988500 TEAD1 JASPAR yes 29187959
chr1 57988488 57988500 TEAD1 JASPAR yes 118296400
chr1 57988488 57988509 IRF1 JASPAR yes 29187960
chr1 57988488 57988509 IRF1 JASPAR yes 118296401
chr1 57988490 57988500 TEAD1 JASPAR yes 29187961
chr1 57988490 57988500 TEAD4 JASPAR yes 29187962
chr1 57988490 57988500 TEAD1 JASPAR yes 118296402
chr1 57988490 57988500 TEAD4 JASPAR yes 118296403
chr1 57988509 57988514 NFY TRANSFAC yes 29187963
chr1 57988509 57988514 NFY TRANSFAC yes 118296404
chr1 57988519 57988529 GABPA JASPAR yes 29187964
chr1 57988519 57988529 GABPA JASPAR yes 118296405
chr1 57988519 57988532 ELF1 JASPAR yes 29187965
chr1 57988519 57988532 ELF1 JASPAR yes 118296406
chr1 57988521 57988527 ETS1 JASPAR yes 29187966
chr1 57988521 57988527 SPI1 JASPAR yes 29187967
chr1 57988521 57988527 ETS1 JASPAR yes 118296407
chr1 57988521 57988527 SPI1 JASPAR yes 118296408
chr1 57988521 57988531 ELK1 JASPAR yes 29187968
chr1 57988521 57988531 ELK1 JASPAR yes 118296409
chr1 57988531 57988552 REST JASPAR yes 29187969
chr1 57988531 57988552 REST JASPAR yes 118296410
chr1 57988532 57988551 REST JASPAR yes 29187970
chr1 57988532 57988551 REST JASPAR yes 118296411
chr1 57988544 57988559 HSF1 JASPAR yes 29187971
chr1 57988544 57988559 HSF1 JASPAR yes 118296412
chr1 57988557 57988568 ESRRA JASPAR yes 29187972
chr1 57988557 57988568 ESRRB JASPAR yes 29187973
chr1 57988557 57988568 ESRRA JASPAR yes 118296413
chr1 57988557 57988568 ESRRB JASPAR yes 118296414
SNP sites on vista1736[chr1:57988271-57988573]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 57988363 rs138808108 G A no 340798
chr1 57988366 rs141993220 G A no 340799
chr1 57988526 rs72913160 C T
ELF1 ELK1 ETS1 GABPA SPI1
340800
chr1 57988527 rs146328409 G A,T
ELF1 ELK1 ETS1 GABPA SPI1
340801
Genes possibly regulated by vista1736[chr1:57988271-57988573]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista1736[chr1:57988271-57988573]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results