EnhancerDB
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  3. vista1781[chr1:59478866-59479252]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1781[chr1:59478866-59479252]
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Tissue distribution of vista1781
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Transcription factor that possibly regulate vista1781[chr1:59478866-59479252]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 59478827 59479417 IKZF1 UCSC Txn Factor no Conserved 107807149
chr1 59478858 59479337 RELA UCSC Txn Factor no Conserved 107807152
chr1 59478899 59479149 ESR1 UCSC Txn Factor no Conserved 107807154
chr1 59478957 59479273 EBF1 UCSC Txn Factor no Conserved 107807158
chr1 59478859 59478875 SOX8 JASPAR yes 29273334
chr1 59478859 59478875 SOX8 JASPAR yes 118298336
chr1 59478875 59478884 SP1 TRANSFAC yes 29273335
chr1 59478875 59478884 SP1 TRANSFAC yes 118298337
chr1 59478891 59478895 YY1 TRANSFAC yes 29273336
chr1 59478891 59478895 YY1 TRANSFAC yes 118298338
chr1 59478892 59478902 HOXA13 JASPAR yes 29273337
chr1 59478892 59478902 HOXB13 JASPAR yes 29273338
chr1 59478892 59478902 HOXD13 JASPAR yes 29273339
chr1 59478892 59478902 HOXA13 JASPAR yes 118298339
chr1 59478892 59478902 HOXB13 JASPAR yes 118298340
chr1 59478892 59478902 HOXD13 JASPAR yes 118298341
chr1 59478892 59478903 HOXC13 JASPAR yes 29273340
chr1 59478892 59478903 HOXC13 JASPAR yes 118298342
chr1 59478896 59478900 TEAD2 TRANSFAC yes 29273341
chr1 59478896 59478900 TEAD2 TRANSFAC yes 118298343
chr1 59478948 59478959 FLI1 JASPAR yes 29273342
chr1 59478948 59478959 FLI1 JASPAR yes 118298344
chr1 59478962 59478966 NFE TRANSFAC yes 29273343
chr1 59478962 59478966 NFE TRANSFAC yes 118298345
chr1 59478965 59478980 STAT1 JASPAR yes 29273344
chr1 59478965 59478980 STAT1 JASPAR yes 118298346
chr1 59478996 59479007 NFKB1 JASPAR yes 29273345
chr1 59478996 59479007 NFKB1 JASPAR yes 118298347
chr1 59479015 59479033 ESR1 JASPAR yes 29273346
chr1 59479015 59479033 ESR2 JASPAR yes 29273347
chr1 59479015 59479033 ESR1 JASPAR yes 118298348
chr1 59479015 59479033 ESR2 JASPAR yes 118298349
chr1 59479016 59479031 ESR2 JASPAR yes 29273348
chr1 59479016 59479031 ESR2 JASPAR yes 118298350
chr1 59479021 59479034 NR2F1 JASPAR yes 29273349
chr1 59479021 59479034 NR2F1 JASPAR yes 118298351
chr1 59479023 59479034 ESRRA JASPAR yes 29273350
chr1 59479023 59479034 ESRRA JASPAR yes 118298352
chr1 59479024 59479032 NR4A2 JASPAR yes 29273351
chr1 59479024 59479032 NR4A2 JASPAR yes 118298353
chr1 59479025 59479039 RXRB JASPAR yes 29273352
chr1 59479025 59479039 RXRG JASPAR yes 29273353
chr1 59479025 59479039 RXRB JASPAR yes 118298354
chr1 59479025 59479039 RXRG JASPAR yes 118298355
chr1 59479034 59479047 POU2F2 JASPAR yes 29273354
chr1 59479034 59479047 POU2F2 JASPAR yes 118298356
chr1 59479058 59479069 E2F6 JASPAR yes 29273355
chr1 59479058 59479069 E2F6 JASPAR yes 118298357
chr1 59479059 59479064 SP1 TRANSFAC yes 29273356
chr1 59479059 59479064 SP1 TRANSFAC yes 118298358
chr1 59479062 59479067 ETS2 TRANSFAC yes 29273357
chr1 59479062 59479067 ETS2 TRANSFAC yes 118298359
chr1 59479074 59479087 NFKB1 JASPAR yes 29273358
chr1 59479074 59479087 NFKB2 JASPAR yes 29273359
chr1 59479074 59479087 NFKB1 JASPAR yes 118298360
chr1 59479074 59479087 NFKB2 JASPAR yes 118298361
chr1 59479075 59479086 NFKB1 JASPAR yes 29273360
chr1 59479075 59479086 NFKB1 JASPAR yes 118298362
chr1 59479088 59479099 ESRRA JASPAR yes 29273361
chr1 59479088 59479099 ESRRA JASPAR yes 118298363
chr1 59479092 59479096 LFA1 TRANSFAC yes 29273362
chr1 59479092 59479096 LFA1 TRANSFAC yes 118298364
chr1 59479105 59479116 NFKB1 JASPAR yes 29273363
chr1 59479105 59479116 NFKB1 JASPAR yes 118298365
chr1 59479106 59479116 NFKB1 JASPAR yes 29273364
chr1 59479106 59479116 RELA JASPAR yes 29273365
chr1 59479106 59479116 REL JASPAR yes 29273366
chr1 59479106 59479116 NFKB1 JASPAR yes 118298366
chr1 59479106 59479116 RELA JASPAR yes 118298367
chr1 59479106 59479116 REL JASPAR yes 118298368
chr1 59479106 59479117 NFKB1 JASPAR yes 29273367
chr1 59479106 59479117 NFKB1 JASPAR yes 118298369
chr1 59479107 59479116 NF-kappaB TRANSFAC yes 29273368
chr1 59479107 59479116 NF-kappaB TRANSFAC yes 118298370
chr1 59479110 59479118 FEV JASPAR yes 29273369
chr1 59479110 59479118 FEV JASPAR yes 118298371
chr1 59479110 59479125 TFAP2C JASPAR yes 29273370
chr1 59479110 59479125 TFAP2C JASPAR yes 118298372
chr1 59479113 59479124 EBF1 JASPAR yes 29273371
chr1 59479113 59479124 EBF1 JASPAR yes 118298373
chr1 59479123 59479131 EHF JASPAR yes 29273372
chr1 59479123 59479131 EHF JASPAR yes 118298374
chr1 59479141 59479158 PAX9 JASPAR yes 29273373
chr1 59479141 59479158 PAX9 JASPAR yes 118298375
chr1 59479142 59479161 PAX5 JASPAR yes 29273374
chr1 59479142 59479161 PAX5 JASPAR yes 118298376
chr1 59479156 59479177 IRF1 JASPAR yes 29273375
chr1 59479156 59479177 IRF1 JASPAR yes 118298377
chr1 59479160 59479175 IRF9 JASPAR yes 29273376
chr1 59479160 59479175 IRF9 JASPAR yes 118298378
chr1 59479171 59479175 NFE TRANSFAC yes 29273377
chr1 59479171 59479175 NFE TRANSFAC yes 118298379
chr1 59479176 59479192 SOX4 JASPAR yes 29273378
chr1 59479176 59479192 SOX4 JASPAR yes 118298380
chr1 59479221 59479242 IRF1 JASPAR yes 29273379
chr1 59479221 59479242 IRF1 JASPAR yes 118298381
chr1 59479225 59479237 IRF1 JASPAR yes 29273380
chr1 59479225 59479237 IRF1 JASPAR yes 118298382
chr1 59479225 59479240 IRF9 JASPAR yes 29273381
chr1 59479225 59479240 IRF9 JASPAR yes 118298383
chr1 59479227 59479248 IRF1 JASPAR yes 29273382
chr1 59479227 59479248 IRF1 JASPAR yes 118298384
chr1 59479229 59479250 IRF1 JASPAR yes 29273383
chr1 59479229 59479250 IRF1 JASPAR yes 118298385
chr1 59479235 59479256 IRF1 JASPAR yes 29273384
chr1 59479235 59479256 IRF1 JASPAR yes 118298386
SNP sites on vista1781[chr1:59478866-59479252]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 59478934 rs141233127 T C
ESR1 IKZF1 RELA
349579
chr1 59479065 rs111232437 G A
E2F6 EBF1 ESR1 ETS2 IKZF1 RELA
349580
chr1 59479160 rs147016131 T C
EBF1 IKZF1 IRF1 IRF9 PAX5 RELA
349581
chr1 59479164 rs577701889 T C
EBF1 IKZF1 IRF1 IRF9 RELA
349582
chr1 59479179 rs563163706 C A
EBF1 IKZF1 RELA SOX4
349583
Genes possibly regulated by vista1781[chr1:59478866-59479252]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista1781[chr1:59478866-59479252]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results