EnhancerDB
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  3. vista19596[chr15:38542676-38542972]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista19596[chr15:38542676-38542972]
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Tissue distribution of vista19596
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Transcription factor that possibly regulate vista19596[chr15:38542676-38542972]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 38542672 38542684 GRHL1 JASPAR yes 22808689
chr15 38542672 38542684 GRHL1 JASPAR yes 70505735
chr15 38542673 38542676 MYB TRANSFAC yes 22808690
chr15 38542673 38542676 MYB TRANSFAC yes 70505736
chr15 38542675 38542685 HMBOX1 JASPAR yes 22808691
chr15 38542675 38542685 HMBOX1 JASPAR yes 70505737
chr15 38542681 38542684 MYB TRANSFAC yes 22808692
chr15 38542681 38542684 MYB TRANSFAC yes 70505738
chr15 38542696 38542711 NR2C2 JASPAR yes 22808693
chr15 38542696 38542711 NR2C2 JASPAR yes 70505739
chr15 38542699 38542704 ETS2 TRANSFAC yes 22808694
chr15 38542699 38542704 ETS2 TRANSFAC yes 70505740
chr15 38542728 38542732 TEAD2 TRANSFAC yes 22808695
chr15 38542728 38542732 TEAD2 TRANSFAC yes 70505741
chr15 38542730 38542747 BCL6B JASPAR yes 22808696
chr15 38542730 38542747 BCL6B JASPAR yes 70505742
chr15 38542735 38542745 NFIA JASPAR yes 22808697
chr15 38542735 38542745 NFIA JASPAR yes 70505743
chr15 38542736 38542745 NFIX JASPAR yes 22808698
chr15 38542736 38542745 NFIX JASPAR yes 70505744
chr15 38542737 38542743 NFIC JASPAR yes 22808699
chr15 38542737 38542743 NFIC JASPAR yes 70505745
chr15 38542747 38542761 TCF7L2 JASPAR yes 22808700
chr15 38542747 38542761 TCF7L2 JASPAR yes 70505746
chr15 38542761 38542776 HNF4G JASPAR yes 22808701
chr15 38542761 38542776 NR2C2 JASPAR yes 22808702
chr15 38542761 38542776 HNF4G JASPAR yes 70505747
chr15 38542761 38542776 NR2C2 JASPAR yes 70505748
chr15 38542762 38542776 NR2F1 JASPAR yes 22808703
chr15 38542762 38542776 RXRB JASPAR yes 22808704
chr15 38542762 38542776 RXRG JASPAR yes 22808705
chr15 38542762 38542776 NR2F1 JASPAR yes 70505749
chr15 38542762 38542776 RXRB JASPAR yes 70505750
chr15 38542762 38542776 RXRG JASPAR yes 70505751
chr15 38542762 38542777 HNF4A JASPAR yes 22808706
chr15 38542762 38542777 HNF4A JASPAR yes 70505752
chr15 38542766 38542776 RORA JASPAR yes 22808707
chr15 38542766 38542776 RORA JASPAR yes 70505753
chr15 38542770 38542787 RARA JASPAR yes 22808708
chr15 38542770 38542787 RARA JASPAR yes 70505754
chr15 38542771 38542775 ESR1 TRANSFAC yes 22808709
chr15 38542771 38542775 ESR1 TRANSFAC yes 70505755
chr15 38542783 38542800 ZNF410 JASPAR yes 22808710
chr15 38542783 38542800 ZNF410 JASPAR yes 70505756
chr15 38542834 38542855 MAFG JASPAR yes 22808711
chr15 38542834 38542855 MAFG JASPAR yes 70505757
chr15 38542854 38542865 NFIL3 JASPAR yes 22808712
chr15 38542854 38542865 NFIL3 JASPAR yes 70505758
chr15 38542855 38542867 DBP JASPAR yes 22808713
chr15 38542855 38542867 DBP JASPAR yes 70505759
chr15 38542873 38542887 ONECUT1 JASPAR yes 22808714
chr15 38542873 38542887 ONECUT1 JASPAR yes 70505760
chr15 38542877 38542886 SOX9 JASPAR yes 22808715
chr15 38542877 38542886 SOX9 JASPAR yes 70505761
chr15 38542878 38542893 SOX21 JASPAR yes 22808716
chr15 38542878 38542893 SOX21 JASPAR yes 70505762
chr15 38542895 38542913 ESR1 JASPAR yes 22808717
chr15 38542895 38542913 ESR1 JASPAR yes 70505763
chr15 38542931 38542946 HNF1A JASPAR yes 22808718
chr15 38542931 38542946 HNF1A JASPAR yes 70505764
chr15 38542932 38542944 HNF1B JASPAR yes 22808719
chr15 38542932 38542944 HNF1B JASPAR yes 70505765
chr15 38542932 38542945 HNF1B JASPAR yes 22808720
chr15 38542932 38542945 HNF1B JASPAR yes 70505766
chr15 38542936 38542952 POU4F2 JASPAR yes 22808721
chr15 38542936 38542952 POU4F3 JASPAR yes 22808722
chr15 38542936 38542952 POU4F2 JASPAR yes 70505767
chr15 38542936 38542952 POU4F3 JASPAR yes 70505768
chr15 38542938 38542942 YY1 TRANSFAC yes 22808723
chr15 38542938 38542942 YY1 TRANSFAC yes 70505769
chr15 38542938 38542952 POU4F1 JASPAR yes 22808724
chr15 38542938 38542952 POU4F1 JASPAR yes 70505770
chr15 38542946 38542958 NHLH1 JASPAR yes 22808725
chr15 38542946 38542958 NHLH1 JASPAR yes 70505771
chr15 38542947 38542957 ID4 JASPAR yes 22808726
chr15 38542947 38542957 NHLH1 JASPAR yes 22808727
chr15 38542947 38542957 TCF3 JASPAR yes 22808728
chr15 38542947 38542957 TCF4 JASPAR yes 22808729
chr15 38542947 38542957 ID4 JASPAR yes 70505772
chr15 38542947 38542957 NHLH1 JASPAR yes 70505773
chr15 38542947 38542957 TCF3 JASPAR yes 70505774
chr15 38542947 38542957 TCF4 JASPAR yes 70505775
chr15 38542948 38542957 SNAI2 JASPAR yes 22808730
chr15 38542948 38542957 SNAI2 JASPAR yes 70505776
chr15 38542949 38542954 USF2 TRANSFAC yes 22808731
chr15 38542949 38542954 USF2 TRANSFAC yes 70505777
SNP sites on vista19596[chr15:38542676-38542972]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 38542685 rs112886917 C T
HMBOX1
3896960
chr15 38542693 rs187699455 C T no 3896961
chr15 38542824 rs367886991 T TA no 3896962
chr15 38542824 rs570705249 T TA no 3896963
chr15 38542838 rs182191272 C T
MAFG
3896964
chr15 38542886 rs77831012 G C
ONECUT1 SOX21 SOX9
3896965
chr15 38542893 rs151228996 T G
SOX21
3896966
chr15 38542903 rs115482856 C T
ESR1
3896967
chr15 38542954 rs113390051 T C
ID4 NHLH1 SNAI2 TCF3 TCF4 USF2
3896968
Genes possibly regulated by vista19596[chr15:38542676-38542972]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 38544527 38649450 + SPRED1 ENSG00000166068.8 38544527 0.81 0.99 13790 98445
Expression level of Genes
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miRNAs possibly regulated by vista19596[chr15:38542676-38542972]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results